EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000020411 (Gene tree)
Gene ID: 102183033
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 51655 bases
Position: chr26:42917654-42969308
Accession: 102183033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000022466	DND1_DSRM	PF14709.7	1.3e-24	1	1
ENSCHIP00000022466	RRM_1	PF00076.22	1e-40	1	3
ENSCHIP00000022466	RRM_1	PF00076.22	1e-40	2	3
ENSCHIP00000022466	RRM_1	PF00076.22	1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000030326	A1CF-201	1788	XM_018041641	ENSCHIP00000022466	595 (aa)	XP_017897130	UPI0003AF97E7

Gene Model

Click here to download ENSCHIG00000020411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000020411	A1CF	51	52.427	ENSCHIG00000024654	SYNCRIP	57	51.385
ENSCHIG00000020411	A1CF	67	72.333	ENSCHIG00000000502	RBM46	82	72.333
ENSCHIG00000020411	A1CF	75	57.768	ENSCHIG00000026214	RBM47	73	57.768

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020411	A1CF	100	95.462	ENSG00000148584	A1CF	100	99.005	Homo_sapiens
ENSCHIG00000020411	A1CF	100	73.964	ENSAPOG00000008259	a1cf	100	73.964	Acanthochromis_polyacanthus
ENSCHIG00000020411	A1CF	100	94.454	ENSAMEG00000000523	A1CF	100	94.790	Ailuropoda_melanoleuca
ENSCHIG00000020411	A1CF	100	76.183	ENSACIG00000008632	a1cf	100	77.325	Amphilophus_citrinellus
ENSCHIG00000020411	A1CF	100	74.632	ENSAOCG00000023744	a1cf	96	84.348	Amphiprion_ocellaris
ENSCHIG00000020411	A1CF	100	75.614	ENSAPEG00000009537	a1cf	100	76.432	Amphiprion_percula
ENSCHIG00000020411	A1CF	100	76.384	ENSATEG00000013720	a1cf	100	77.199	Anabas_testudineus
ENSCHIG00000020411	A1CF	100	87.919	ENSAPLG00000002964	A1CF	100	87.919	Anas_platyrhynchos
ENSCHIG00000020411	A1CF	100	83.054	ENSACAG00000015269	A1CF	100	82.718	Anolis_carolinensis
ENSCHIG00000020411	A1CF	100	94.286	ENSANAG00000019974	A1CF	100	93.950	Aotus_nancymaae
ENSCHIG00000020411	A1CF	100	73.529	ENSACLG00000017428	a1cf	100	75.000	Astatotilapia_calliptera
ENSCHIG00000020411	A1CF	100	74.876	ENSAMXG00000018180	a1cf	100	74.876	Astyanax_mexicanus
ENSCHIG00000020411	A1CF	100	97.311	ENSBTAG00000021195	A1CF	100	97.311	Bos_taurus
ENSCHIG00000020411	A1CF	100	95.630	ENSCJAG00000005045	A1CF	100	95.294	Callithrix_jacchus
ENSCHIG00000020411	A1CF	100	94.454	ENSCAFG00000015581	A1CF	100	94.622	Canis_familiaris
ENSCHIG00000020411	A1CF	100	94.454	ENSCAFG00020026421	A1CF	98	96.959	Canis_lupus_dingo
ENSCHIG00000020411	A1CF	95	93.440	ENSTSYG00000001755	A1CF	100	92.705	Carlito_syrichta
ENSCHIG00000020411	A1CF	100	82.515	ENSCAPG00000017386	A1CF	100	82.515	Cavia_aperea
ENSCHIG00000020411	A1CF	100	94.790	ENSCPOG00000009807	A1CF	100	94.622	Cavia_porcellus
ENSCHIG00000020411	A1CF	100	95.126	ENSCCAG00000018168	A1CF	100	94.790	Cebus_capucinus
ENSCHIG00000020411	A1CF	100	93.445	ENSCATG00000043715	A1CF	100	93.277	Cercocebus_atys
ENSCHIG00000020411	A1CF	100	94.966	ENSCLAG00000010424	A1CF	100	94.966	Chinchilla_lanigera
ENSCHIG00000020411	A1CF	100	95.126	ENSCSAG00000007032	A1CF	100	94.958	Chlorocebus_sabaeus
ENSCHIG00000020411	A1CF	98	89.492	ENSCHOG00000009089	A1CF	98	89.492	Choloepus_hoffmanni
ENSCHIG00000020411	A1CF	100	88.591	ENSCPBG00000026464	A1CF	100	88.591	Chrysemys_picta_bellii
ENSCHIG00000020411	A1CF	100	95.294	ENSCANG00000038032	A1CF	100	95.126	Colobus_angolensis_palliatus
ENSCHIG00000020411	A1CF	100	93.109	ENSCGRG00001017413	A1cf	100	93.109	Cricetulus_griseus_chok1gshd
ENSCHIG00000020411	A1CF	100	92.437	ENSCGRG00000017332	A1cf	100	92.437	Cricetulus_griseus_crigri
ENSCHIG00000020411	A1CF	100	75.249	ENSCSEG00000002361	a1cf	100	76.412	Cynoglossus_semilaevis
ENSCHIG00000020411	A1CF	100	75.244	ENSCVAG00000010520	a1cf	100	76.547	Cyprinodon_variegatus
ENSCHIG00000020411	A1CF	100	78.037	ENSDARG00000002968	a1cf	100	79.201	Danio_rerio
ENSCHIG00000020411	A1CF	100	94.118	ENSDNOG00000002829	A1CF	100	94.118	Dasypus_novemcinctus
ENSCHIG00000020411	A1CF	81	92.754	ENSETEG00000012527	A1CF	81	92.754	Echinops_telfairi
ENSCHIG00000020411	A1CF	100	96.650	ENSEASG00005012924	A1CF	100	96.650	Equus_asinus_asinus
ENSCHIG00000020411	A1CF	100	96.147	ENSECAG00000010424	A1CF	100	96.147	Equus_caballus
ENSCHIG00000020411	A1CF	78	80.728	ENSEEUG00000000013	A1CF	97	81.778	Erinaceus_europaeus
ENSCHIG00000020411	A1CF	100	78.369	ENSELUG00000003159	a1cf	100	79.201	Esox_lucius
ENSCHIG00000020411	A1CF	100	91.933	ENSFCAG00000011179	A1CF	100	92.101	Felis_catus
ENSCHIG00000020411	A1CF	100	85.738	ENSFALG00000013183	A1CF	100	85.738	Ficedula_albicollis
ENSCHIG00000020411	A1CF	100	92.773	ENSFDAG00000019371	A1CF	100	92.773	Fukomys_damarensis
ENSCHIG00000020411	A1CF	100	70.684	ENSFHEG00000019652	a1cf	96	82.812	Fundulus_heteroclitus
ENSCHIG00000020411	A1CF	100	71.782	ENSGMOG00000018943	a1cf	100	71.617	Gadus_morhua
ENSCHIG00000020411	A1CF	95	88.142	ENSGALG00000003765	A1CF	97	88.142	Gallus_gallus
ENSCHIG00000020411	A1CF	100	70.724	ENSGAFG00000014868	a1cf	100	71.546	Gambusia_affinis
ENSCHIG00000020411	A1CF	100	74.836	ENSGACG00000010241	a1cf	100	75.329	Gasterosteus_aculeatus
ENSCHIG00000020411	A1CF	94	88.099	ENSGAGG00000016508	A1CF	97	88.099	Gopherus_agassizii
ENSCHIG00000020411	A1CF	100	95.294	ENSGGOG00000009670	A1CF	100	95.126	Gorilla_gorilla
ENSCHIG00000020411	A1CF	100	75.530	ENSHBUG00000021959	a1cf	100	77.325	Haplochromis_burtoni
ENSCHIG00000020411	A1CF	100	94.790	ENSHGLG00000008955	A1CF	100	94.790	Heterocephalus_glaber_female
ENSCHIG00000020411	A1CF	100	94.118	ENSHGLG00100000518	A1CF	100	94.118	Heterocephalus_glaber_male
ENSCHIG00000020411	A1CF	100	70.358	ENSHCOG00000017669	a1cf	100	73.496	Hippocampus_comes
ENSCHIG00000020411	A1CF	89	82.276	ENSIPUG00000010367	a1cf	95	82.552	Ictalurus_punctatus
ENSCHIG00000020411	A1CF	100	77.886	ENSKMAG00000006568	a1cf	100	78.537	Kryptolebias_marmoratus
ENSCHIG00000020411	A1CF	99	75.856	ENSLBEG00000020994	a1cf	98	77.340	Labrus_bergylta
ENSCHIG00000020411	A1CF	100	80.801	ENSLACG00000008061	A1CF	100	80.634	Latimeria_chalumnae
ENSCHIG00000020411	A1CF	100	82.167	ENSLOCG00000006302	a1cf	100	82.167	Lepisosteus_oculatus
ENSCHIG00000020411	A1CF	100	93.613	ENSLAFG00000015462	A1CF	100	93.613	Loxodonta_africana
ENSCHIG00000020411	A1CF	100	93.782	ENSMFAG00000035948	A1CF	100	93.613	Macaca_fascicularis
ENSCHIG00000020411	A1CF	100	93.782	ENSMMUG00000007077	A1CF	100	93.613	Macaca_mulatta
ENSCHIG00000020411	A1CF	100	93.445	ENSMNEG00000031454	A1CF	100	93.277	Macaca_nemestrina
ENSCHIG00000020411	A1CF	100	94.790	ENSMLEG00000037223	A1CF	100	94.622	Mandrillus_leucophaeus
ENSCHIG00000020411	A1CF	100	73.813	ENSMAMG00000010402	a1cf	100	76.268	Mastacembelus_armatus
ENSCHIG00000020411	A1CF	100	76.333	ENSMZEG00005013245	a1cf	100	77.333	Maylandia_zebra
ENSCHIG00000020411	A1CF	100	88.275	ENSMGAG00000001507	A1CF	100	88.275	Meleagris_gallopavo
ENSCHIG00000020411	A1CF	100	92.773	ENSMAUG00000007422	A1cf	100	92.773	Mesocricetus_auratus
ENSCHIG00000020411	A1CF	100	92.642	ENSMICG00000003377	A1CF	100	92.809	Microcebus_murinus
ENSCHIG00000020411	A1CF	100	92.773	ENSMOCG00000021536	A1cf	100	92.773	Microtus_ochrogaster
ENSCHIG00000020411	A1CF	100	67.758	ENSMMOG00000009422	a1cf	100	69.558	Mola_mola
ENSCHIG00000020411	A1CF	92	88.848	ENSMODG00000016478	A1CF	97	89.981	Monodelphis_domestica
ENSCHIG00000020411	A1CF	100	72.500	ENSMALG00000012992	a1cf	100	72.167	Monopterus_albus
ENSCHIG00000020411	A1CF	100	92.101	MGP_CAROLIEiJ_G0022873	A1cf	100	92.101	Mus_caroli
ENSCHIG00000020411	A1CF	100	92.101	ENSMUSG00000052595	A1cf	99	95.263	Mus_musculus
ENSCHIG00000020411	A1CF	100	91.429	MGP_PahariEiJ_G0014366	A1cf	100	91.429	Mus_pahari
ENSCHIG00000020411	A1CF	100	91.765	MGP_SPRETEiJ_G0023792	A1cf	100	91.765	Mus_spretus
ENSCHIG00000020411	A1CF	100	88.571	ENSMPUG00000016971	A1CF	100	88.571	Mustela_putorius_furo
ENSCHIG00000020411	A1CF	100	94.622	ENSMLUG00000016071	A1CF	100	94.622	Myotis_lucifugus
ENSCHIG00000020411	A1CF	100	93.950	ENSNGAG00000015136	A1cf	100	93.950	Nannospalax_galili
ENSCHIG00000020411	A1CF	100	75.856	ENSNBRG00000001712	a1cf	100	77.651	Neolamprologus_brichardi
ENSCHIG00000020411	A1CF	100	95.966	ENSNLEG00000012028	A1CF	100	95.966	Nomascus_leucogenys
ENSCHIG00000020411	A1CF	94	88.277	ENSMEUG00000015909	A1CF	100	88.277	Notamacropus_eugenii
ENSCHIG00000020411	A1CF	88	83.619	ENSOPRG00000010667	A1CF	97	83.712	Ochotona_princeps
ENSCHIG00000020411	A1CF	100	76.183	ENSONIG00000019105	a1cf	100	77.162	Oreochromis_niloticus
ENSCHIG00000020411	A1CF	78	87.794	ENSOANG00000007360	A1CF	99	87.794	Ornithorhynchus_anatinus
ENSCHIG00000020411	A1CF	100	91.611	ENSOCUG00000011587	A1CF	100	91.946	Oryctolagus_cuniculus
ENSCHIG00000020411	A1CF	100	74.673	ENSORLG00000013342	a1cf	100	74.837	Oryzias_latipes
ENSCHIG00000020411	A1CF	100	76.183	ENSORLG00020000586	a1cf	100	76.672	Oryzias_latipes_hni
ENSCHIG00000020411	A1CF	100	76.183	ENSORLG00015018569	a1cf	100	76.672	Oryzias_latipes_hsok
ENSCHIG00000020411	A1CF	100	75.777	ENSOMEG00000013531	a1cf	100	75.614	Oryzias_melastigma
ENSCHIG00000020411	A1CF	100	93.277	ENSOGAG00000012884	A1CF	100	93.445	Otolemur_garnettii
ENSCHIG00000020411	A1CF	100	99.160	ENSOARG00000013695	A1CF	100	99.160	Ovis_aries
ENSCHIG00000020411	A1CF	97	93.241	ENSPPAG00000028115	A1CF	100	97.166	Pan_paniscus
ENSCHIG00000020411	A1CF	100	93.613	ENSPPRG00000012180	A1CF	100	93.782	Panthera_pardus
ENSCHIG00000020411	A1CF	100	93.613	ENSPTIG00000021223	A1CF	100	93.782	Panthera_tigris_altaica
ENSCHIG00000020411	A1CF	100	95.126	ENSPTRG00000002508	A1CF	100	94.958	Pan_troglodytes
ENSCHIG00000020411	A1CF	100	93.782	ENSPANG00000021988	A1CF	100	93.613	Papio_anubis
ENSCHIG00000020411	A1CF	100	80.532	ENSPKIG00000025176	a1cf	100	80.366	Paramormyrops_kingsleyae
ENSCHIG00000020411	A1CF	100	86.577	ENSPSIG00000010318	A1CF	100	86.577	Pelodiscus_sinensis
ENSCHIG00000020411	A1CF	98	65.306	ENSPMGG00000013359	a1cf	99	66.724	Periophthalmus_magnuspinnatus
ENSCHIG00000020411	A1CF	100	92.941	ENSPEMG00000015021	A1cf	100	92.941	Peromyscus_maniculatus_bairdii
ENSCHIG00000020411	A1CF	100	87.752	ENSPCIG00000002175	A1CF	100	87.752	Phascolarctos_cinereus
ENSCHIG00000020411	A1CF	100	76.873	ENSPFOG00000007437	-	100	78.013	Poecilia_formosa
ENSCHIG00000020411	A1CF	100	77.036	ENSPFOG00000006683	a1cf	100	78.176	Poecilia_formosa
ENSCHIG00000020411	A1CF	100	75.733	ENSPLAG00000000026	a1cf	100	76.873	Poecilia_latipinna
ENSCHIG00000020411	A1CF	100	75.733	ENSPLAG00000001210	-	100	76.873	Poecilia_latipinna
ENSCHIG00000020411	A1CF	100	69.771	ENSPMEG00000015529	-	100	70.915	Poecilia_mexicana
ENSCHIG00000020411	A1CF	100	68.627	ENSPMEG00000000921	a1cf	100	69.771	Poecilia_mexicana
ENSCHIG00000020411	A1CF	100	76.710	ENSPREG00000016298	a1cf	100	78.013	Poecilia_reticulata
ENSCHIG00000020411	A1CF	100	94.454	ENSPPYG00000002819	A1CF	100	94.454	Pongo_abelii
ENSCHIG00000020411	A1CF	79	72.939	ENSPCAG00000006463	A1CF	70	89.796	Procavia_capensis
ENSCHIG00000020411	A1CF	100	94.966	ENSPCOG00000024172	A1CF	100	94.966	Propithecus_coquereli
ENSCHIG00000020411	A1CF	100	76.835	ENSPNYG00000017944	a1cf	100	78.630	Pundamilia_nyererei
ENSCHIG00000020411	A1CF	100	79.967	ENSPNAG00000007704	a1cf	100	79.801	Pygocentrus_nattereri
ENSCHIG00000020411	A1CF	100	90.924	ENSRNOG00000033195	A1cf	100	90.924	Rattus_norvegicus
ENSCHIG00000020411	A1CF	100	88.442	ENSRBIG00000042892	A1CF	100	91.389	Rhinopithecus_bieti
ENSCHIG00000020411	A1CF	100	95.126	ENSRROG00000041398	A1CF	100	94.958	Rhinopithecus_roxellana
ENSCHIG00000020411	A1CF	100	95.798	ENSSBOG00000021930	A1CF	100	95.798	Saimiri_boliviensis_boliviensis
ENSCHIG00000020411	A1CF	100	89.262	ENSSHAG00000005096	A1CF	100	89.262	Sarcophilus_harrisii
ENSCHIG00000020411	A1CF	100	79.270	ENSSFOG00015011774	a1cf	100	79.602	Scleropages_formosus
ENSCHIG00000020411	A1CF	100	76.059	ENSSMAG00000013271	a1cf	100	76.221	Scophthalmus_maximus
ENSCHIG00000020411	A1CF	100	76.783	ENSSDUG00000013930	a1cf	100	77.446	Seriola_dumerili
ENSCHIG00000020411	A1CF	100	70.792	ENSSLDG00000004290	a1cf	100	70.297	Seriola_lalandi_dorsalis
ENSCHIG00000020411	A1CF	95	83.392	ENSSARG00000005940	A1CF	96	83.392	Sorex_araneus
ENSCHIG00000020411	A1CF	95	86.116	ENSSPUG00000006797	A1CF	95	86.116	Sphenodon_punctatus
ENSCHIG00000020411	A1CF	100	96.975	ENSSSCG00000010431	A1CF	100	96.975	Sus_scrofa
ENSCHIG00000020411	A1CF	100	87.458	ENSTGUG00000005090	A1CF	100	87.124	Taeniopygia_guttata
ENSCHIG00000020411	A1CF	100	75.367	ENSTRUG00000001982	a1cf	100	75.204	Takifugu_rubripes
ENSCHIG00000020411	A1CF	100	75.772	ENSTNIG00000003580	a1cf	100	75.447	Tetraodon_nigroviridis
ENSCHIG00000020411	A1CF	97	88.562	ENSTTRG00000013190	A1CF	95	88.562	Tursiops_truncatus
ENSCHIG00000020411	A1CF	100	93.613	ENSUAMG00000020065	A1CF	100	93.445	Ursus_americanus
ENSCHIG00000020411	A1CF	100	94.454	ENSUMAG00000011162	A1CF	100	94.454	Ursus_maritimus
ENSCHIG00000020411	A1CF	87	89.443	ENSVPAG00000006130	A1CF	86	89.443	Vicugna_pacos
ENSCHIG00000020411	A1CF	100	93.277	ENSVVUG00000002504	A1CF	99	94.312	Vulpes_vulpes
ENSCHIG00000020411	A1CF	100	77.500	ENSXETG00000006611	a1cf	100	77.500	Xenopus_tropicalis
ENSCHIG00000020411	A1CF	100	77.213	ENSXCOG00000003302	a1cf	100	77.869	Xiphophorus_couchianus
ENSCHIG00000020411	A1CF	100	78.361	ENSXMAG00000016703	a1cf	100	79.016	Xiphophorus_maculatus