EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000020434 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 3064 bases
Position: chr4:7695465-7698528
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000022488	MMR_HSR1	PF01926.23	1.9e-05	1	1
ENSCHIP00000022485	MMR_HSR1	PF01926.23	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000030348	-	621	-	ENSCHIP00000022488	206 (aa)	-	UPI000D190ED5
ENSCHIT00000030346	-	888	-	ENSCHIP00000022485	295 (aa)	-	UPI0006B1120D

Gene Model

Click here to download ENSCHIG00000020434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000020434	-	82	37.759	ENSCHIG00000020146	-	75	37.759
ENSCHIG00000020434	-	79	47.853	ENSCHIG00000012731	-	73	42.254
ENSCHIG00000020434	-	78	41.875	ENSCHIG00000005581	-	83	41.848
ENSCHIG00000020434	-	69	46.853	ENSCHIG00000015895	-	73	40.000
ENSCHIG00000020434	-	78	45.000	ENSCHIG00000014676	-	75	38.967
ENSCHIG00000020434	-	78	45.342	ENSCHIG00000019645	-	75	46.629
ENSCHIG00000020434	-	72	53.020	ENSCHIG00000019058	-	58	50.265
ENSCHIG00000020434	-	82	38.174	ENSCHIG00000013558	-	74	38.174
ENSCHIG00000020434	-	100	91.611	ENSCHIG00000000431	-	96	91.611
ENSCHIG00000020434	-	78	47.500	ENSCHIG00000024423	-	68	43.000
ENSCHIG00000020434	-	78	42.857	ENSCHIG00000023846	-	75	44.382
ENSCHIG00000020434	-	85	43.452	ENSCHIG00000021733	-	87	42.708
ENSCHIG00000020434	-	89	43.262	ENSCHIG00000013015	-	86	42.268
ENSCHIG00000020434	-	80	36.287	ENSCHIG00000023365	-	73	36.287
ENSCHIG00000020434	-	79	43.373	ENSCHIG00000016726	-	85	42.473
ENSCHIG00000020434	-	99	90.753	ENSCHIG00000000607	-	98	90.753
ENSCHIG00000020434	-	78	46.875	ENSCHIG00000023569	-	73	40.845
ENSCHIG00000020434	-	78	49.068	ENSCHIG00000026449	-	66	48.947
ENSCHIG00000020434	-	99	87.205	ENSCHIG00000013093	-	99	86.195
ENSCHIG00000020434	-	77	45.912	ENSCHIG00000000400	-	66	41.624
ENSCHIG00000020434	-	70	46.528	ENSCHIG00000014351	-	68	39.024
ENSCHIG00000020434	-	73	52.000	ENSCHIG00000012346	-	57	49.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020434	-	94	67.293	ENSG00000281887	GIMAP1-GIMAP5	75	63.929	Homo_sapiens
ENSCHIG00000020434	-	90	68.586	ENSG00000196329	GIMAP5	87	63.929	Homo_sapiens
ENSCHIG00000020434	-	81	48.503	ENSAPLG00000001066	-	86	45.498	Anas_platyrhynchos
ENSCHIG00000020434	-	76	46.795	ENSACAG00000028535	-	76	43.478	Anolis_carolinensis
ENSCHIG00000020434	-	79	44.512	ENSACAG00000017193	-	87	43.367	Anolis_carolinensis
ENSCHIG00000020434	-	77	47.468	ENSACAG00000016862	-	89	48.634	Anolis_carolinensis
ENSCHIG00000020434	-	75	36.702	ENSACAG00000016727	-	77	36.702	Anolis_carolinensis
ENSCHIG00000020434	-	100	90.940	ENSBTAG00000004894	-	96	91.262	Bos_taurus
ENSCHIG00000020434	-	91	85.075	ENSBTAG00000000715	-	80	87.500	Bos_taurus
ENSCHIG00000020434	-	99	88.889	ENSBTAG00000039588	-	99	87.879	Bos_taurus
ENSCHIG00000020434	-	92	63.100	ENSCJAG00000020126	-	86	63.878	Callithrix_jacchus
ENSCHIG00000020434	-	99	68.385	ENSCAFG00000024817	-	85	68.385	Canis_familiaris
ENSCHIG00000020434	-	87	76.503	ENSCAFG00020006487	-	94	61.856	Canis_lupus_dingo
ENSCHIG00000020434	-	97	68.750	ENSTSYG00000010016	-	89	70.455	Carlito_syrichta
ENSCHIG00000020434	-	96	61.268	ENSCAPG00000007631	-	86	62.642	Cavia_aperea
ENSCHIG00000020434	-	96	61.268	ENSCPOG00000003376	-	86	62.642	Cavia_porcellus
ENSCHIG00000020434	-	94	64.057	ENSCCAG00000009203	-	88	65.314	Cebus_capucinus
ENSCHIG00000020434	-	99	64.726	ENSCLAG00000001246	-	86	67.170	Chinchilla_lanigera
ENSCHIG00000020434	-	91	64.925	ENSCLAG00000001322	-	80	66.667	Chinchilla_lanigera
ENSCHIG00000020434	-	94	65.125	ENSCSAG00000006865	-	84	65.683	Chlorocebus_sabaeus
ENSCHIG00000020434	-	78	50.311	ENSCPBG00000005548	-	65	48.947	Chrysemys_picta_bellii
ENSCHIG00000020434	-	94	64.769	ENSCANG00000029802	-	88	65.314	Colobus_angolensis_palliatus
ENSCHIG00000020434	-	95	58.571	ENSCGRG00001024272	-	93	58.571	Cricetulus_griseus_chok1gshd
ENSCHIG00000020434	-	95	58.571	ENSCGRG00001024196	-	91	58.571	Cricetulus_griseus_chok1gshd
ENSCHIG00000020434	-	95	58.929	ENSCGRG00000014686	-	93	58.929	Cricetulus_griseus_crigri
ENSCHIG00000020434	-	95	58.571	ENSCGRG00000015177	-	91	58.571	Cricetulus_griseus_crigri
ENSCHIG00000020434	-	97	72.125	ENSECAG00000029716	-	91	72.125	Equus_caballus
ENSCHIG00000020434	-	98	72.069	ENSECAG00000007663	-	93	72.069	Equus_caballus
ENSCHIG00000020434	-	91	72.388	ENSECAG00000007668	-	84	73.643	Equus_caballus
ENSCHIG00000020434	-	93	58.242	ENSEEUG00000006852	-	92	60.700	Erinaceus_europaeus
ENSCHIG00000020434	-	98	66.552	ENSFCAG00000042622	-	94	66.552	Felis_catus
ENSCHIG00000020434	-	77	50.943	ENSGAGG00000015829	-	86	50.273	Gopherus_agassizii
ENSCHIG00000020434	-	78	45.679	ENSGAGG00000015825	-	67	44.444	Gopherus_agassizii
ENSCHIG00000020434	-	94	67.293	ENSGGOG00000014216	-	87	63.929	Gorilla_gorilla
ENSCHIG00000020434	-	96	59.859	ENSSTOG00000021076	-	84	62.835	Ictidomys_tridecemlineatus
ENSCHIG00000020434	-	90	35.404	ENSKMAG00000007013	-	72	34.463	Kryptolebias_marmoratus
ENSCHIG00000020434	-	94	64.057	ENSMFAG00000044951	-	84	64.576	Macaca_fascicularis
ENSCHIG00000020434	-	94	64.057	ENSMMUG00000001270	-	79	64.576	Macaca_mulatta
ENSCHIG00000020434	-	94	64.057	ENSMNEG00000028821	-	88	64.576	Macaca_nemestrina
ENSCHIG00000020434	-	92	65.683	ENSMLEG00000029622	-	88	65.314	Mandrillus_leucophaeus
ENSCHIG00000020434	-	99	63.851	ENSMICG00000027282	-	96	63.851	Microcebus_murinus
ENSCHIG00000020434	-	87	68.852	ENSMICG00000035983	-	84	66.284	Microcebus_murinus
ENSCHIG00000020434	-	87	64.130	ENSMOCG00000002213	-	89	66.667	Microtus_ochrogaster
ENSCHIG00000020434	-	95	58.007	ENSMOCG00000018608	-	86	61.719	Microtus_ochrogaster
ENSCHIG00000020434	-	95	51.071	ENSMODG00000003669	-	88	51.071	Monodelphis_domestica
ENSCHIG00000020434	-	96	55.674	MGP_CAROLIEiJ_G0028355	Gimap3	82	60.400	Mus_caroli
ENSCHIG00000020434	-	87	63.736	MGP_CAROLIEiJ_G0028354	Gimap5	86	58.271	Mus_caroli
ENSCHIG00000020434	-	87	63.187	ENSMUSG00000043505	Gimap5	86	57.895	Mus_musculus
ENSCHIG00000020434	-	91	58.801	ENSMUSG00000039264	Gimap3	82	60.887	Mus_musculus
ENSCHIG00000020434	-	96	57.597	MGP_PahariEiJ_G0022105	Gimap3	85	61.328	Mus_pahari
ENSCHIG00000020434	-	96	58.511	MGP_PahariEiJ_G0022104	Gimap5	85	60.920	Mus_pahari
ENSCHIG00000020434	-	87	70.492	ENSMLUG00000028966	-	83	64.479	Myotis_lucifugus
ENSCHIG00000020434	-	87	66.667	ENSMLUG00000026545	-	83	61.328	Myotis_lucifugus
ENSCHIG00000020434	-	90	67.021	ENSMLUG00000023466	-	83	66.667	Myotis_lucifugus
ENSCHIG00000020434	-	97	68.473	ENSMLUG00000025954	-	100	68.473	Myotis_lucifugus
ENSCHIG00000020434	-	94	66.304	ENSMLUG00000007287	-	83	68.992	Myotis_lucifugus
ENSCHIG00000020434	-	80	47.699	ENSMLUG00000022809	-	93	47.699	Myotis_lucifugus
ENSCHIG00000020434	-	95	63.571	ENSNGAG00000022013	-	91	63.571	Nannospalax_galili
ENSCHIG00000020434	-	98	59.794	ENSNGAG00000020526	-	87	63.566	Nannospalax_galili
ENSCHIG00000020434	-	90	67.293	ENSNLEG00000003844	-	87	63.929	Nomascus_leucogenys
ENSCHIG00000020434	-	92	51.103	ENSMEUG00000000849	-	94	52.157	Notamacropus_eugenii
ENSCHIG00000020434	-	93	52.899	ENSMEUG00000016596	-	94	53.725	Notamacropus_eugenii
ENSCHIG00000020434	-	87	60.853	ENSODEG00000011306	-	82	61.265	Octodon_degus
ENSCHIG00000020434	-	77	74.843	ENSOCUG00000025892	-	88	74.020	Oryctolagus_cuniculus
ENSCHIG00000020434	-	94	68.592	ENSOCUG00000005976	-	82	69.767	Oryctolagus_cuniculus
ENSCHIG00000020434	-	98	63.322	ENSOGAG00000009145	-	87	65.672	Otolemur_garnettii
ENSCHIG00000020434	-	100	95.302	ENSOARG00000001288	-	96	95.302	Ovis_aries
ENSCHIG00000020434	-	100	90.268	ENSOARG00000001589	-	87	90.268	Ovis_aries
ENSCHIG00000020434	-	81	87.261	ENSOARG00000001183	-	92	83.938	Ovis_aries
ENSCHIG00000020434	-	91	85.075	ENSOARG00000001645	-	83	87.500	Ovis_aries
ENSCHIG00000020434	-	94	67.669	ENSPPAG00000042001	-	87	64.286	Pan_paniscus
ENSCHIG00000020434	-	98	67.931	ENSPPRG00000017393	-	94	67.931	Panthera_pardus
ENSCHIG00000020434	-	98	67.931	ENSPTIG00000012405	-	94	67.931	Panthera_tigris_altaica
ENSCHIG00000020434	-	94	67.669	ENSPTRG00000034465	GIMAP1	87	64.286	Pan_troglodytes
ENSCHIG00000020434	-	94	67.669	ENSPTRG00000028356	-	77	64.286	Pan_troglodytes
ENSCHIG00000020434	-	94	64.769	ENSPANG00000030896	-	88	65.314	Papio_anubis
ENSCHIG00000020434	-	79	41.202	ENSPSIG00000016016	-	74	41.202	Pelodiscus_sinensis
ENSCHIG00000020434	-	73	48.667	ENSPSIG00000006796	-	96	45.960	Pelodiscus_sinensis
ENSCHIG00000020434	-	64	55.224	ENSPSIG00000004906	-	86	55.639	Pelodiscus_sinensis
ENSCHIG00000020434	-	77	53.459	ENSPSIG00000000508	-	78	50.500	Pelodiscus_sinensis
ENSCHIG00000020434	-	78	51.250	ENSPSIG00000000573	-	94	45.778	Pelodiscus_sinensis
ENSCHIG00000020434	-	83	49.730	ENSPSIG00000013467	-	97	50.000	Pelodiscus_sinensis
ENSCHIG00000020434	-	95	57.447	ENSPEMG00000019236	-	85	60.153	Peromyscus_maniculatus_bairdii
ENSCHIG00000020434	-	87	65.000	ENSPEMG00000014554	-	87	59.690	Peromyscus_maniculatus_bairdii
ENSCHIG00000020434	-	77	46.835	ENSPCIG00000001766	-	68	46.597	Phascolarctos_cinereus
ENSCHIG00000020434	-	96	51.408	ENSPCIG00000008658	-	82	53.208	Phascolarctos_cinereus
ENSCHIG00000020434	-	90	68.063	ENSPPYG00000018173	-	81	63.571	Pongo_abelii
ENSCHIG00000020434	-	98	65.529	ENSPCOG00000016811	-	94	65.529	Propithecus_coquereli
ENSCHIG00000020434	-	87	61.538	ENSRNOG00000008416	Gimap5	82	61.905	Rattus_norvegicus
ENSCHIG00000020434	-	92	66.790	ENSRBIG00000035290	-	88	66.421	Rhinopithecus_bieti
ENSCHIG00000020434	-	94	65.836	ENSRROG00000028817	-	84	66.421	Rhinopithecus_roxellana
ENSCHIG00000020434	-	93	61.091	ENSSBOG00000032164	-	84	63.707	Saimiri_boliviensis_boliviensis
ENSCHIG00000020434	-	87	55.435	ENSSHAG00000000843	-	86	56.796	Sarcophilus_harrisii
ENSCHIG00000020434	-	87	63.388	ENSSARG00000004634	-	88	59.696	Sorex_araneus
ENSCHIG00000020434	-	79	53.988	ENSSPUG00000003272	-	51	49.758	Sphenodon_punctatus
ENSCHIG00000020434	-	80	53.614	ENSSPUG00000009848	-	83	45.490	Sphenodon_punctatus
ENSCHIG00000020434	-	77	52.532	ENSSPUG00000010046	-	82	45.000	Sphenodon_punctatus
ENSCHIG00000020434	-	79	43.558	ENSSPUG00000009907	-	84	44.324	Sphenodon_punctatus
ENSCHIG00000020434	-	93	41.818	ENSSPUG00000010036	-	79	45.492	Sphenodon_punctatus
ENSCHIG00000020434	-	85	54.857	ENSSPUG00000010063	-	71	50.481	Sphenodon_punctatus
ENSCHIG00000020434	-	78	53.125	ENSSPUG00000009760	-	91	51.244	Sphenodon_punctatus
ENSCHIG00000020434	-	96	48.990	ENSSPUG00000014119	-	89	48.990	Sphenodon_punctatus
ENSCHIG00000020434	-	78	44.099	ENSSPUG00000009917	-	57	43.085	Sphenodon_punctatus
ENSCHIG00000020434	-	78	54.658	ENSSPUG00000009833	-	86	46.444	Sphenodon_punctatus
ENSCHIG00000020434	-	91	72.015	ENSSSCG00000039407	-	84	73.256	Sus_scrofa
ENSCHIG00000020434	-	96	62.676	ENSTBEG00000000035	-	88	63.774	Tupaia_belangeri
ENSCHIG00000020434	-	94	76.071	ENSTTRG00000003204	-	92	77.491	Tursiops_truncatus
ENSCHIG00000020434	-	81	80.120	ENSTTRG00000011008	-	99	77.824	Tursiops_truncatus
ENSCHIG00000020434	-	99	64.384	ENSUMAG00000018133	-	88	64.384	Ursus_maritimus
ENSCHIG00000020434	-	94	72.438	ENSVPAG00000011693	-	89	73.626	Vicugna_pacos