EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000020582 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 3223 bases
Position: chrLWLT01000021.1:47018389-47021611
Accession: 102190396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000022705	KH_1	PF00013.29	3.5e-13	1	1
ENSCHIP00000022712	KH_1	PF00013.29	4.2e-13	1	1
ENSCHIP00000022705	DEAD	PF00270.29	2e-40	1	1
ENSCHIP00000022712	DEAD	PF00270.29	2.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000030565	-	1830	-	ENSCHIP00000022705	609 (aa)	-	UPI000D194699
ENSCHIT00000030572	-	1839	XM_005701026	ENSCHIP00000022712	612 (aa)	XP_005701083	UPI000D18B8FB

Gene Model

Click here to download ENSCHIG00000020582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000020582	-	59	31.351	ENSCHIG00000000047	-	65	31.316
ENSCHIG00000020582	-	70	32.952	ENSCHIG00000006275	DDX52	76	32.819
ENSCHIG00000020582	-	68	36.830	ENSCHIG00000009756	DDX41	66	36.830
ENSCHIG00000020582	-	57	35.376	ENSCHIG00000019910	DDX49	73	35.376
ENSCHIG00000020582	-	58	33.149	ENSCHIG00000026114	DDX6	73	33.149
ENSCHIG00000020582	-	72	43.919	ENSCHIG00000011800	DDX5	71	43.820
ENSCHIG00000020582	-	62	32.718	ENSCHIG00000026798	DDX54	52	30.769
ENSCHIG00000020582	-	60	34.060	ENSCHIG00000026011	DDX47	77	34.060
ENSCHIG00000020582	-	66	37.864	ENSCHIG00000015567	DDX4	55	38.481
ENSCHIG00000020582	-	57	30.446	ENSCHIG00000009658	DDX28	69	30.446
ENSCHIG00000020582	-	63	32.031	ENSCHIG00000024284	EIF4A3	91	32.031
ENSCHIG00000020582	-	68	38.839	ENSCHIG00000018783	DDX23	54	38.631
ENSCHIG00000020582	-	60	39.637	ENSCHIG00000024903	-	61	38.519
ENSCHIG00000020582	-	57	30.435	ENSCHIG00000006239	-	76	30.435
ENSCHIG00000020582	-	56	33.799	ENSCHIG00000019280	DDX18	54	33.799
ENSCHIG00000020582	-	57	35.196	ENSCHIG00000000285	DDX50	50	35.196
ENSCHIG00000020582	-	61	31.536	ENSCHIG00000022153	EIF4A1	90	31.536
ENSCHIG00000020582	-	71	33.032	ENSCHIG00000014558	DDX59	68	33.032
ENSCHIG00000020582	-	96	69.949	ENSCHIG00000017351	-	88	70.855
ENSCHIG00000020582	-	72	45.455	ENSCHIG00000021332	DDX17	87	45.263
ENSCHIG00000020582	-	62	38.889	ENSCHIG00000010585	-	60	38.889
ENSCHIG00000020582	-	59	31.159	ENSCHIG00000020011	DDX31	56	31.159
ENSCHIG00000020582	-	61	32.075	ENSCHIG00000012317	EIF4A2	89	32.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020582	-	94	76.379	ENSAMEG00000019953	-	98	74.037	Ailuropoda_melanoleuca
ENSCHIG00000020582	-	95	93.857	ENSBTAG00000046635	-	94	93.966	Bos_taurus
ENSCHIG00000020582	-	63	77.165	ENSCAFG00020005312	-	82	76.963	Canis_lupus_dingo
ENSCHIG00000020582	-	99	65.723	ENSCPOG00000013960	-	96	65.566	Cavia_porcellus
ENSCHIG00000020582	-	94	70.084	ENSCLAG00000017424	-	89	69.167	Chinchilla_lanigera
ENSCHIG00000020582	-	99	74.837	ENSEASG00005001728	-	93	75.327	Equus_asinus_asinus
ENSCHIG00000020582	-	99	73.052	ENSECAG00000035665	-	97	74.673	Equus_caballus
ENSCHIG00000020582	-	99	72.890	ENSECAG00000037015	DDX53	97	74.510	Equus_caballus
ENSCHIG00000020582	-	52	84.848	ENSEEUG00000008838	-	70	84.848	Erinaceus_europaeus
ENSCHIG00000020582	-	78	70.168	ENSFDAG00000020660	-	95	69.691	Fukomys_damarensis
ENSCHIG00000020582	-	68	68.916	ENSFDAG00000018215	-	87	70.000	Fukomys_damarensis
ENSCHIG00000020582	-	95	74.315	ENSSTOG00000027719	-	78	73.765	Ictidomys_tridecemlineatus
ENSCHIG00000020582	-	99	73.083	ENSLAFG00000011531	-	97	72.920	Loxodonta_africana
ENSCHIG00000020582	-	94	80.556	ENSMPUG00000019441	-	95	80.311	Mustela_putorius_furo
ENSCHIG00000020582	-	93	71.652	ENSMLUG00000022233	-	98	69.732	Myotis_lucifugus
ENSCHIG00000020582	-	100	67.840	ENSMLUG00000022321	-	97	69.305	Myotis_lucifugus
ENSCHIG00000020582	-	100	70.436	ENSOCUG00000004437	-	97	70.598	Oryctolagus_cuniculus
ENSCHIG00000020582	-	93	74.341	ENSOGAG00000026282	-	92	73.529	Otolemur_garnettii
ENSCHIG00000020582	-	99	98.363	ENSOARG00000016525	-	100	98.363	Ovis_aries
ENSCHIG00000020582	-	92	79.682	ENSPPRG00000011327	-	97	74.331	Panthera_pardus
ENSCHIG00000020582	-	92	79.859	ENSPTIG00000001243	-	97	74.606	Panthera_tigris_altaica
ENSCHIG00000020582	-	99	74.673	ENSPVAG00000001484	-	97	75.327	Pteropus_vampyrus
ENSCHIG00000020582	-	99	77.288	ENSSSCG00000012169	-	97	77.288	Sus_scrofa
ENSCHIG00000020582	-	57	50.142	ENSTBEG00000001513	-	88	50.000	Tupaia_belangeri
ENSCHIG00000020582	-	94	73.921	ENSTBEG00000014650	-	90	74.868	Tupaia_belangeri
ENSCHIG00000020582	-	100	69.055	ENSTTRG00000016514	-	97	69.055	Tursiops_truncatus
ENSCHIG00000020582	-	94	80.172	ENSUAMG00000000177	-	94	77.387	Ursus_americanus
ENSCHIG00000020582	-	61	85.523	ENSUMAG00000011448	-	89	81.772	Ursus_maritimus
ENSCHIG00000020582	-	99	77.124	ENSVPAG00000007860	-	97	77.124	Vicugna_pacos
ENSCHIG00000020582	-	95	76.199	ENSVVUG00000012789	-	96	74.450	Vulpes_vulpes