EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000020607 (Gene tree)
Gene ID: 102189899
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 9489 bases
Position: chr19:44840739-44850227
Accession: 102189899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000022744	RRM_1	PF00076.22	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000030604	RDM1-201	849	XM_005693955	ENSCHIP00000022744	282 (aa)	XP_005694012	UPI000847A366

Gene Model

Click here to download ENSCHIG00000020607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020607's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020607	RDM1	100	78.723	ENSG00000278023	RDM1	97	88.722	Homo_sapiens
ENSCHIG00000020607	RDM1	64	37.158	ENSAPOG00000021886	zgc:103564	70	37.158	Acanthochromis_polyacanthus
ENSCHIG00000020607	RDM1	89	32.016	ENSAPEG00000008929	zgc:103564	92	32.016	Amphiprion_percula
ENSCHIG00000020607	RDM1	87	52.016	ENSAPLG00000004384	RDM1	94	52.016	Anas_platyrhynchos
ENSCHIG00000020607	RDM1	98	46.975	ENSACAG00000012989	-	100	47.500	Anolis_carolinensis
ENSCHIG00000020607	RDM1	100	77.305	ENSANAG00000032752	RDM1	96	86.466	Aotus_nancymaae
ENSCHIG00000020607	RDM1	100	95.745	ENSBTAG00000000030	RDM1	99	95.745	Bos_taurus
ENSCHIG00000020607	RDM1	90	79.842	ENSCJAG00000015031	RDM1	96	87.970	Callithrix_jacchus
ENSCHIG00000020607	RDM1	89	74.708	ENSCAFG00000015160	-	100	74.708	Canis_familiaris
ENSCHIG00000020607	RDM1	99	67.986	ENSCPOG00000001495	-	96	67.986	Cavia_porcellus
ENSCHIG00000020607	RDM1	97	77.289	ENSCCAG00000035763	RDM1	96	86.466	Cebus_capucinus
ENSCHIG00000020607	RDM1	100	80.496	ENSCATG00000044451	RDM1	98	88.148	Cercocebus_atys
ENSCHIG00000020607	RDM1	94	75.758	ENSCSAG00000006209	RDM1	99	75.758	Chlorocebus_sabaeus
ENSCHIG00000020607	RDM1	79	54.709	ENSCPBG00000009105	RDM1	93	53.659	Chrysemys_picta_bellii
ENSCHIG00000020607	RDM1	100	79.433	ENSCANG00000041322	RDM1	98	86.667	Colobus_angolensis_palliatus
ENSCHIG00000020607	RDM1	97	71.429	ENSCGRG00001015927	Rdm1	99	70.819	Cricetulus_griseus_chok1gshd
ENSCHIG00000020607	RDM1	91	35.659	ENSCVAG00000001956	zgc:103564	92	35.659	Cyprinodon_variegatus
ENSCHIG00000020607	RDM1	89	82.470	ENSDNOG00000045224	-	93	82.470	Dasypus_novemcinctus
ENSCHIG00000020607	RDM1	68	83.505	ENSEASG00005010554	RDM1	69	83.505	Equus_asinus_asinus
ENSCHIG00000020607	RDM1	94	81.181	ENSECAG00000022182	RDM1	96	81.181	Equus_caballus
ENSCHIG00000020607	RDM1	89	73.200	ENSEEUG00000006127	RDM1	99	73.200	Erinaceus_europaeus
ENSCHIG00000020607	RDM1	81	85.526	ENSFCAG00000043429	RDM1	96	87.970	Felis_catus
ENSCHIG00000020607	RDM1	98	52.518	ENSGALG00000000243	RDM1	97	52.518	Gallus_gallus
ENSCHIG00000020607	RDM1	91	50.769	ENSGAGG00000000293	-	78	52.800	Gopherus_agassizii
ENSCHIG00000020607	RDM1	100	79.433	ENSGGOG00000010584	RDM1	96	88.722	Gorilla_gorilla
ENSCHIG00000020607	RDM1	99	34.843	ENSHCOG00000002518	-	93	36.531	Hippocampus_comes
ENSCHIG00000020607	RDM1	100	78.369	ENSSTOG00000022491	RDM1	99	78.369	Ictidomys_tridecemlineatus
ENSCHIG00000020607	RDM1	100	77.817	ENSLAFG00000029300	RDM1	99	77.817	Loxodonta_africana
ENSCHIG00000020607	RDM1	100	80.142	ENSMFAG00000032968	RDM1	98	88.148	Macaca_fascicularis
ENSCHIG00000020607	RDM1	100	80.496	ENSMMUG00000006847	RDM1	98	88.148	Macaca_mulatta
ENSCHIG00000020607	RDM1	100	80.142	ENSMNEG00000039977	RDM1	98	88.148	Macaca_nemestrina
ENSCHIG00000020607	RDM1	100	80.142	ENSMLEG00000041158	RDM1	98	88.148	Mandrillus_leucophaeus
ENSCHIG00000020607	RDM1	92	49.237	ENSMGAG00000008774	RDM1	96	52.632	Meleagris_gallopavo
ENSCHIG00000020607	RDM1	99	71.174	ENSMAUG00000018559	Rdm1	99	71.174	Mesocricetus_auratus
ENSCHIG00000020607	RDM1	100	81.915	ENSMICG00000038651	RDM1	98	87.681	Microcebus_murinus
ENSCHIG00000020607	RDM1	98	69.314	ENSMOCG00000015095	Rdm1	99	69.314	Microtus_ochrogaster
ENSCHIG00000020607	RDM1	98	64.621	ENSMODG00000011101	RDM1	100	64.621	Monodelphis_domestica
ENSCHIG00000020607	RDM1	99	71.886	MGP_CAROLIEiJ_G0017226	Rdm1	99	71.886	Mus_caroli
ENSCHIG00000020607	RDM1	99	71.530	ENSMUSG00000010362	Rdm1	99	71.530	Mus_musculus
ENSCHIG00000020607	RDM1	99	71.174	MGP_PahariEiJ_G0018356	Rdm1	99	71.174	Mus_pahari
ENSCHIG00000020607	RDM1	99	71.530	MGP_SPRETEiJ_G0018069	Rdm1	99	71.530	Mus_spretus
ENSCHIG00000020607	RDM1	100	84.155	ENSMPUG00000008363	RDM1	99	84.155	Mustela_putorius_furo
ENSCHIG00000020607	RDM1	100	80.142	ENSNLEG00000014173	RDM1	98	88.148	Nomascus_leucogenys
ENSCHIG00000020607	RDM1	89	65.476	ENSMEUG00000015826	RDM1	100	65.476	Notamacropus_eugenii
ENSCHIG00000020607	RDM1	90	75.591	ENSOCUG00000022704	RDM1	97	75.591	Oryctolagus_cuniculus
ENSCHIG00000020607	RDM1	100	79.787	ENSOGAG00000011332	RDM1	99	79.787	Otolemur_garnettii
ENSCHIG00000020607	RDM1	100	80.142	ENSPPAG00000029969	RDM1	99	80.142	Pan_paniscus
ENSCHIG00000020607	RDM1	100	80.142	ENSPTRG00000009031	RDM1	98	88.806	Pan_troglodytes
ENSCHIG00000020607	RDM1	100	80.142	ENSPANG00000022933	RDM1	98	87.407	Papio_anubis
ENSCHIG00000020607	RDM1	97	71.429	ENSPEMG00000018985	Rdm1	98	71.583	Peromyscus_maniculatus_bairdii
ENSCHIG00000020607	RDM1	100	78.723	ENSPPYG00000008198	RDM1	99	78.723	Pongo_abelii
ENSCHIG00000020607	RDM1	100	80.142	ENSPCOG00000017995	RDM1	98	82.609	Propithecus_coquereli
ENSCHIG00000020607	RDM1	89	87.302	ENSPVAG00000001116	RDM1	100	87.302	Pteropus_vampyrus
ENSCHIG00000020607	RDM1	99	71.530	ENSRNOG00000020751	Rdm1	99	71.530	Rattus_norvegicus
ENSCHIG00000020607	RDM1	100	78.369	ENSRBIG00000030000	RDM1	98	87.407	Rhinopithecus_bieti
ENSCHIG00000020607	RDM1	100	78.723	ENSRROG00000035242	RDM1	98	87.407	Rhinopithecus_roxellana
ENSCHIG00000020607	RDM1	98	70.036	ENSSHAG00000013584	RDM1	100	70.036	Sarcophilus_harrisii
ENSCHIG00000020607	RDM1	93	50.000	ENSSPUG00000010941	RDM1	96	50.000	Sphenodon_punctatus
ENSCHIG00000020607	RDM1	99	33.096	ENSSPAG00000011690	-	92	34.496	Stegastes_partitus
ENSCHIG00000020607	RDM1	80	78.319	ENSSSCG00000017574	-	94	78.319	Sus_scrofa
ENSCHIG00000020607	RDM1	89	60.800	ENSTBEG00000010030	RDM1	98	60.800	Tupaia_belangeri
ENSCHIG00000020607	RDM1	100	85.106	ENSUAMG00000027279	RDM1	99	85.106	Ursus_americanus
ENSCHIG00000020607	RDM1	100	85.106	ENSUMAG00000015423	RDM1	97	85.106	Ursus_maritimus