EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCHIG00000020638 (Gene tree)
Gene ID
102172962
Gene Symbol
SF3A3
Alias
PRP9|PRPF9|SAP61|SF3a60
Full Name
splicing factor 3a subunit 3
Gene Type
protein_coding
Species
Capra_hircus
Status
putative
Strand
Minus strand
Length
24411 bases
Position
chr3:12806675-12831085
Accession
102172962
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHIP00000022859SF3a60_bindingdPF12108.81.6e-1511
ENSCHIP00000022832SF3a60_bindingdPF12108.81.7e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHIT00000030692SF3A3-2012324XM_005678676ENSCHIP00000022832501 (aa)XP_005678733UPI000057F858
ENSCHIT00000030719SF3A3-2021476-ENSCHIP00000022859491 (aa)-UPI000D197444
Gene Model
Click here to download ENSCHIG00000020638's gene model file
Pathways
Pathway IDPathway NameSource
chx03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020638's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHIG00000020638SF3A310099.601ENSG00000183431SF3A310099.601Homo_sapiens
ENSCHIG00000020638SF3A310091.018ENSAPOG00000015608sf3a310091.018Acanthochromis_polyacanthus
ENSCHIG00000020638SF3A310099.800ENSAMEG00000001262SF3A310099.800Ailuropoda_melanoleuca
ENSCHIG00000020638SF3A39585.404ENSACIG00000009061sf3a39985.404Amphilophus_citrinellus
ENSCHIG00000020638SF3A310091.617ENSAOCG00000013954sf3a310091.617Amphiprion_ocellaris
ENSCHIG00000020638SF3A310091.617ENSAPEG00000007297sf3a310091.617Amphiprion_percula
ENSCHIG00000020638SF3A310090.818ENSATEG00000008754sf3a310090.818Anabas_testudineus
ENSCHIG00000020638SF3A39497.441ENSAPLG00000014900SF3A310097.441Anas_platyrhynchos
ENSCHIG00000020638SF3A310096.008ENSACAG00000017058SF3A310096.008Anolis_carolinensis
ENSCHIG00000020638SF3A310077.046ENSANAG00000036903-10077.046Aotus_nancymaae
ENSCHIG00000020638SF3A39995.382ENSANAG00000014878SF3A310095.382Aotus_nancymaae
ENSCHIG00000020638SF3A310091.617ENSACLG00000017977sf3a310091.617Astatotilapia_calliptera
ENSCHIG00000020638SF3A310091.617ENSAMXG00000016855sf3a38791.617Astyanax_mexicanus
ENSCHIG00000020638SF3A3100100.000ENSBTAG00000007299SF3A3100100.000Bos_taurus
ENSCHIG00000020638SF3A310052.087WBGene00011758T13H5.410052.087Caenorhabditis_elegans
ENSCHIG00000020638SF3A310099.601ENSCJAG00000002176SF3A310099.601Callithrix_jacchus
ENSCHIG00000020638SF3A310099.800ENSCAFG00000003222-10099.800Canis_familiaris
ENSCHIG00000020638SF3A310099.800ENSCAFG00000000683-10099.800Canis_familiaris
ENSCHIG00000020638SF3A310099.800ENSCAFG00020006186SF3A310099.800Canis_lupus_dingo
ENSCHIG00000020638SF3A310093.413ENSTSYG00000008417SF3A310093.413Carlito_syrichta
ENSCHIG00000020638SF3A38763.616ENSCAPG00000003466SF3A310060.641Cavia_aperea
ENSCHIG00000020638SF3A310099.601ENSCPOG00000008660SF3A310099.601Cavia_porcellus
ENSCHIG00000020638SF3A310099.601ENSCCAG00000033732SF3A310099.601Cebus_capucinus
ENSCHIG00000020638SF3A310071.173ENSCCAG00000034048-10067.992Cebus_capucinus
ENSCHIG00000020638SF3A310099.601ENSCATG00000043496SF3A310099.601Cercocebus_atys
ENSCHIG00000020638SF3A310073.904ENSCATG00000043537-10074.502Cercocebus_atys
ENSCHIG00000020638SF3A39482.303ENSCATG00000041660-10082.516Cercocebus_atys
ENSCHIG00000020638SF3A310099.202ENSCLAG00000010838SF3A310099.202Chinchilla_lanigera
ENSCHIG00000020638SF3A39599.580ENSCSAG00000001120SF3A310099.580Chlorocebus_sabaeus
ENSCHIG00000020638SF3A38089.418ENSCHOG00000006849SF3A38089.418Choloepus_hoffmanni
ENSCHIG00000020638SF3A37069.318ENSCPBG00000007472-9569.318Chrysemys_picta_bellii
ENSCHIG00000020638SF3A310090.631ENSCPBG00000018291-10090.631Chrysemys_picta_bellii
ENSCHIG00000020638SF3A310067.530ENSCING00000002730-10067.530Ciona_intestinalis
ENSCHIG00000020638SF3A310068.064ENSCSAVG00000005063-10068.064Ciona_savignyi
ENSCHIG00000020638SF3A310070.459ENSCANG00000035535-10070.459Colobus_angolensis_palliatus
ENSCHIG00000020638SF3A310099.601ENSCANG00000042083SF3A310099.601Colobus_angolensis_palliatus
ENSCHIG00000020638SF3A310099.002ENSCGRG00001011320Sf3a310099.002Cricetulus_griseus_chok1gshd
ENSCHIG00000020638SF3A310099.002ENSCGRG00000012156Sf3a310099.002Cricetulus_griseus_crigri
ENSCHIG00000020638SF3A310089.621ENSCSEG00000010401sf3a310089.621Cynoglossus_semilaevis
ENSCHIG00000020638SF3A39489.339ENSCVAG00000010239sf3a39589.339Cyprinodon_variegatus
ENSCHIG00000020638SF3A310091.018ENSDARG00000100114sf3a310091.647Danio_rerio
ENSCHIG00000020638SF3A39199.562ENSDNOG00000046628SF3A39999.562Dasypus_novemcinctus
ENSCHIG00000020638SF3A310099.800ENSDORG00000008798Sf3a310099.800Dipodomys_ordii
ENSCHIG00000020638SF3A310064.625FBgn0014366noi10064.427Drosophila_melanogaster
ENSCHIG00000020638SF3A310080.716ENSEBUG00000015411sf3a39281.113Eptatretus_burgeri
ENSCHIG00000020638SF3A310099.800ENSEASG00005012906SF3A310099.800Equus_asinus_asinus
ENSCHIG00000020638SF3A310099.800ENSECAG00000017333SF3A310099.800Equus_caballus
ENSCHIG00000020638SF3A310088.822ENSELUG00000010024sf3a310088.822Esox_lucius
ENSCHIG00000020638SF3A310099.800ENSFCAG00000027772SF3A310099.800Felis_catus
ENSCHIG00000020638SF3A310097.206ENSFALG00000001003SF3A310097.206Ficedula_albicollis
ENSCHIG00000020638SF3A310099.601ENSFDAG00000020908SF3A310099.601Fukomys_damarensis
ENSCHIG00000020638SF3A310089.621ENSFHEG00000019107sf3a310089.621Fundulus_heteroclitus
ENSCHIG00000020638SF3A310089.222ENSGMOG00000015540sf3a310089.222Gadus_morhua
ENSCHIG00000020638SF3A310097.206ENSGALG00000001540SF3A310097.206Gallus_gallus
ENSCHIG00000020638SF3A310090.220ENSGAFG00000002320sf3a310090.220Gambusia_affinis
ENSCHIG00000020638SF3A310091.018ENSGACG00000007842sf3a310091.018Gasterosteus_aculeatus
ENSCHIG00000020638SF3A310097.405ENSGAGG00000014980SF3A310097.405Gopherus_agassizii
ENSCHIG00000020638SF3A310099.601ENSGGOG00000013928SF3A310099.601Gorilla_gorilla
ENSCHIG00000020638SF3A310077.445ENSGGOG00000022611-10076.846Gorilla_gorilla
ENSCHIG00000020638SF3A310091.617ENSHBUG00000018158sf3a310091.886Haplochromis_burtoni
ENSCHIG00000020638SF3A310099.401ENSHGLG00000012502SF3A310099.401Heterocephalus_glaber_female
ENSCHIG00000020638SF3A310099.401ENSHGLG00100010546SF3A310099.401Heterocephalus_glaber_male
ENSCHIG00000020638SF3A310089.022ENSHCOG00000015109sf3a310089.022Hippocampus_comes
ENSCHIG00000020638SF3A310090.419ENSIPUG00000011603sf3a310090.419Ictalurus_punctatus
ENSCHIG00000020638SF3A310099.202ENSSTOG00000001691SF3A310099.202Ictidomys_tridecemlineatus
ENSCHIG00000020638SF3A310099.401ENSJJAG00000012404Sf3a310099.401Jaculus_jaculus
ENSCHIG00000020638SF3A310090.020ENSKMAG00000007632sf3a310090.020Kryptolebias_marmoratus
ENSCHIG00000020638SF3A310083.267ENSLBEG00000000816sf3a310083.267Labrus_bergylta
ENSCHIG00000020638SF3A310092.814ENSLOCG00000003273sf3a310092.814Lepisosteus_oculatus
ENSCHIG00000020638SF3A310087.026ENSLAFG00000008094SF3A310087.026Loxodonta_africana
ENSCHIG00000020638SF3A39481.876ENSMFAG00000036706-10082.090Macaca_fascicularis
ENSCHIG00000020638SF3A310099.601ENSMFAG00000043047SF3A310099.601Macaca_fascicularis
ENSCHIG00000020638SF3A310099.601ENSMMUG00000023199SF3A310099.601Macaca_mulatta
ENSCHIG00000020638SF3A310079.283ENSMMUG00000038820-10079.482Macaca_mulatta
ENSCHIG00000020638SF3A39478.891ENSMNEG00000028686-10079.104Macaca_nemestrina
ENSCHIG00000020638SF3A310099.601ENSMNEG00000044291SF3A310099.601Macaca_nemestrina
ENSCHIG00000020638SF3A310073.108ENSMLEG00000028631-10073.705Mandrillus_leucophaeus
ENSCHIG00000020638SF3A310083.234ENSMLEG00000036714-10083.433Mandrillus_leucophaeus
ENSCHIG00000020638SF3A310099.601ENSMLEG00000030641SF3A310099.601Mandrillus_leucophaeus
ENSCHIG00000020638SF3A310091.218ENSMAMG00000001942sf3a310091.218Mastacembelus_armatus
ENSCHIG00000020638SF3A310091.617ENSMZEG00005016987sf3a310091.617Maylandia_zebra
ENSCHIG00000020638SF3A310092.339ENSMGAG00000002875SF3A310092.339Meleagris_gallopavo
ENSCHIG00000020638SF3A310094.611ENSMICG00000001485-10094.611Microcebus_murinus
ENSCHIG00000020638SF3A39196.725ENSMICG00000026541-10096.725Microcebus_murinus
ENSCHIG00000020638SF3A310093.214ENSMICG00000043548-10093.214Microcebus_murinus
ENSCHIG00000020638SF3A39591.789ENSMOCG00000014565-9790.316Microtus_ochrogaster
ENSCHIG00000020638SF3A310095.210ENSMOCG00000019939-10095.210Microtus_ochrogaster
ENSCHIG00000020638SF3A310091.417ENSMMOG00000014307sf3a310091.417Mola_mola
ENSCHIG00000020638SF3A310091.218ENSMODG00000024045-10091.218Monodelphis_domestica
ENSCHIG00000020638SF3A310078.447ENSMODG00000017729-10077.476Monodelphis_domestica
ENSCHIG00000020638SF3A310090.818ENSMALG00000004836sf3a310091.228Monopterus_albus
ENSCHIG00000020638SF3A310099.002MGP_CAROLIEiJ_G0026449Sf3a310099.002Mus_caroli
ENSCHIG00000020638SF3A310099.002ENSMUSG00000028902Sf3a310099.002Mus_musculus
ENSCHIG00000020638SF3A310093.214MGP_PahariEiJ_G0028780Sf3a310093.214Mus_pahari
ENSCHIG00000020638SF3A310099.002MGP_SPRETEiJ_G0027428Sf3a310099.002Mus_spretus
ENSCHIG00000020638SF3A310099.401ENSMLUG00000000991SF3A310099.401Myotis_lucifugus
ENSCHIG00000020638SF3A310092.814ENSNGAG00000018032Sf3a310092.814Nannospalax_galili
ENSCHIG00000020638SF3A310090.419ENSNLEG00000011720SF3A310090.419Nomascus_leucogenys
ENSCHIG00000020638SF3A310099.401ENSOPRG00000012785SF3A310099.401Ochotona_princeps
ENSCHIG00000020638SF3A310083.865ENSODEG00000000937-10086.454Octodon_degus
ENSCHIG00000020638SF3A310096.208ENSODEG00000006854-10096.208Octodon_degus
ENSCHIG00000020638SF3A310087.026ENSODEG00000018393-10086.826Octodon_degus
ENSCHIG00000020638SF3A310094.212ENSODEG00000007470-10094.212Octodon_degus
ENSCHIG00000020638SF3A38992.184ENSONIG00000010296sf3a310092.184Oreochromis_niloticus
ENSCHIG00000020638SF3A39498.507ENSOANG00000002473SF3A310098.507Ornithorhynchus_anatinus
ENSCHIG00000020638SF3A310099.401ENSOCUG00000005407SF3A310099.401Oryctolagus_cuniculus
ENSCHIG00000020638SF3A310089.820ENSORLG00000008175sf3a310089.820Oryzias_latipes
ENSCHIG00000020638SF3A310089.621ENSORLG00020013708sf3a310089.621Oryzias_latipes_hni
ENSCHIG00000020638SF3A310089.621ENSORLG00015004104sf3a310089.621Oryzias_latipes_hsok
ENSCHIG00000020638SF3A310089.820ENSOMEG00000020177sf3a310089.820Oryzias_melastigma
ENSCHIG00000020638SF3A3100100.000ENSOARG00000019950SF3A3100100.000Ovis_aries
ENSCHIG00000020638SF3A310076.846ENSPPAG00000039955-10076.248Pan_paniscus
ENSCHIG00000020638SF3A310099.601ENSPPAG00000034066SF3A310099.601Pan_paniscus
ENSCHIG00000020638SF3A310099.800ENSPPRG00000001258SF3A310099.800Panthera_pardus
ENSCHIG00000020638SF3A310099.800ENSPTIG00000007515SF3A310099.800Panthera_tigris_altaica
ENSCHIG00000020638SF3A310099.601ENSPTRG00000000559SF3A310099.601Pan_troglodytes
ENSCHIG00000020638SF3A310077.844ENSPTRG00000046013-10077.246Pan_troglodytes
ENSCHIG00000020638SF3A310073.253ENSPANG00000031214-10072.255Papio_anubis
ENSCHIG00000020638SF3A310099.601ENSPANG00000021859SF3A310099.601Papio_anubis
ENSCHIG00000020638SF3A310086.228ENSPANG00000029393-10086.427Papio_anubis
ENSCHIG00000020638SF3A310092.216ENSPKIG00000004719sf3a310092.216Paramormyrops_kingsleyae
ENSCHIG00000020638SF3A310094.632ENSPSIG00000004273SF3A310094.632Pelodiscus_sinensis
ENSCHIG00000020638SF3A39190.153ENSPMGG00000003610sf3a39490.153Periophthalmus_magnuspinnatus
ENSCHIG00000020638SF3A310099.002ENSPEMG00000020805Sf3a310099.002Peromyscus_maniculatus_bairdii
ENSCHIG00000020638SF3A35480.000ENSPMAG00000001044sf3a39880.000Petromyzon_marinus
ENSCHIG00000020638SF3A310099.002ENSPCIG00000025719SF3A310099.002Phascolarctos_cinereus
ENSCHIG00000020638SF3A310090.220ENSPFOG00000005284sf3a310090.220Poecilia_formosa
ENSCHIG00000020638SF3A39986.922ENSPLAG00000003979sf3a39286.922Poecilia_latipinna
ENSCHIG00000020638SF3A37886.945ENSPMEG00000021132sf3a38886.945Poecilia_mexicana
ENSCHIG00000020638SF3A310090.020ENSPREG00000013802sf3a310090.020Poecilia_reticulata
ENSCHIG00000020638SF3A310096.607ENSPPYG00000001519SF3A310096.607Pongo_abelii
ENSCHIG00000020638SF3A310092.615ENSPCAG00000010734SF3A310092.615Procavia_capensis
ENSCHIG00000020638SF3A310082.435ENSPCOG00000017131-10082.435Propithecus_coquereli
ENSCHIG00000020638SF3A310087.500ENSPCOG00000020389-10087.500Propithecus_coquereli
ENSCHIG00000020638SF3A310087.226ENSPVAG00000010158SF3A310087.226Pteropus_vampyrus
ENSCHIG00000020638SF3A310091.617ENSPNYG00000000786sf3a310091.617Pundamilia_nyererei
ENSCHIG00000020638SF3A310091.417ENSPNAG00000010298sf3a310091.417Pygocentrus_nattereri
ENSCHIG00000020638SF3A310099.002ENSRNOG00000007629Sf3a310099.002Rattus_norvegicus
ENSCHIG00000020638SF3A310072.056ENSRBIG00000043833-10072.056Rhinopithecus_bieti
ENSCHIG00000020638SF3A310073.054ENSRBIG00000041123-10073.253Rhinopithecus_bieti
ENSCHIG00000020638SF3A310099.601ENSRBIG00000043567SF3A310099.601Rhinopithecus_bieti
ENSCHIG00000020638SF3A310099.601ENSRROG00000033888SF3A310099.601Rhinopithecus_roxellana
ENSCHIG00000020638SF3A39479.744ENSRROG00000032346-10079.957Rhinopithecus_roxellana
ENSCHIG00000020638SF3A310072.056ENSSBOG00000026932-10070.459Saimiri_boliviensis_boliviensis
ENSCHIG00000020638SF3A39592.264ENSSBOG00000032688SF3A3100100.000Saimiri_boliviensis_boliviensis
ENSCHIG00000020638SF3A39299.115ENSSHAG00000014530SF3A310099.117Sarcophilus_harrisii
ENSCHIG00000020638SF3A310092.016ENSSFOG00015005975sf3a310092.016Scleropages_formosus
ENSCHIG00000020638SF3A310090.818ENSSMAG00000020213sf3a310090.818Scophthalmus_maximus
ENSCHIG00000020638SF3A310088.024ENSSDUG00000011590sf3a310088.024Seriola_dumerili
ENSCHIG00000020638SF3A310091.617ENSSLDG00000020635sf3a310091.617Seriola_lalandi_dorsalis
ENSCHIG00000020638SF3A310096.607ENSSPUG00000004010SF3A310096.607Sphenodon_punctatus
ENSCHIG00000020638SF3A310091.218ENSSPAG00000018653sf3a310091.218Stegastes_partitus
ENSCHIG00000020638SF3A310099.800ENSSSCG00000003643SF3A310099.800Sus_scrofa
ENSCHIG00000020638SF3A38996.789ENSTGUG00000001466SF3A310096.789Taeniopygia_guttata
ENSCHIG00000020638SF3A310089.820ENSTRUG00000009089sf3a310089.820Takifugu_rubripes
ENSCHIG00000020638SF3A310089.066ENSTNIG00000009800sf3a310089.066Tetraodon_nigroviridis
ENSCHIG00000020638SF3A310086.826ENSTBEG00000007614SF3A310086.826Tupaia_belangeri
ENSCHIG00000020638SF3A310099.601ENSTTRG00000013519SF3A310099.601Tursiops_truncatus
ENSCHIG00000020638SF3A310099.800ENSUAMG00000006134SF3A310099.800Ursus_americanus
ENSCHIG00000020638SF3A310099.800ENSUMAG00000021250SF3A310099.800Ursus_maritimus
ENSCHIG00000020638SF3A367100.000ENSVPAG00000004778SF3A373100.000Vicugna_pacos
ENSCHIG00000020638SF3A310096.008ENSVVUG00000022908SF3A310096.008Vulpes_vulpes
ENSCHIG00000020638SF3A310093.014ENSXETG00000022923sf3a310093.014Xenopus_tropicalis
ENSCHIG00000020638SF3A310090.220ENSXMAG00000017165sf3a310090.220Xiphophorus_maculatus

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