EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000020948 (Gene tree)
Gene ID: 102169138
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 13985 bases
Position: chr1:143449020-143463004
Accession: 102169138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000023326	Nop52	PF05997.12	5.8e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000031186	RRP1-201	1353	XM_018051796	ENSCHIP00000023326	450 (aa)	XP_017907285	UPI0008470E67

Gene Model

Click here to download ENSCHIG00000020948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020948	RRP1	99	65.385	ENSG00000160214	RRP1	96	95.349	Homo_sapiens
ENSCHIG00000020948	RRP1	80	49.593	ENSAMEG00000011401	RRP1B	50	48.780	Ailuropoda_melanoleuca
ENSCHIG00000020948	RRP1	98	67.401	ENSAMEG00000011448	RRP1	98	67.483	Ailuropoda_melanoleuca
ENSCHIG00000020948	RRP1	66	48.148	ENSACIG00000019121	rrp1	64	44.410	Amphilophus_citrinellus
ENSCHIG00000020948	RRP1	79	48.739	ENSAOCG00000017894	-	79	49.444	Amphiprion_ocellaris
ENSCHIG00000020948	RRP1	99	63.053	ENSANAG00000037815	RRP1	99	63.901	Aotus_nancymaae
ENSCHIG00000020948	RRP1	100	89.778	ENSBTAG00000003981	RRP1	100	89.111	Bos_taurus
ENSCHIG00000020948	RRP1	94	66.136	ENSCJAG00000043205	RRP1	90	66.136	Callithrix_jacchus
ENSCHIG00000020948	RRP1	98	67.991	ENSCAFG00000010646	RRP1	85	87.336	Canis_familiaris
ENSCHIG00000020948	RRP1	98	67.991	ENSCAFG00020018979	RRP1	99	68.000	Canis_lupus_dingo
ENSCHIG00000020948	RRP1	100	63.499	ENSTSYG00000012831	RRP1	100	63.283	Carlito_syrichta
ENSCHIG00000020948	RRP1	99	62.826	ENSCPOG00000038986	RRP1	99	64.758	Cavia_porcellus
ENSCHIG00000020948	RRP1	77	47.740	ENSCPOG00000002396	RRP1B	52	45.833	Cavia_porcellus
ENSCHIG00000020948	RRP1	75	52.023	ENSCCAG00000029384	RRP1B	51	52.478	Cebus_capucinus
ENSCHIG00000020948	RRP1	99	65.659	ENSCCAG00000029828	RRP1	99	65.443	Cebus_capucinus
ENSCHIG00000020948	RRP1	99	64.871	ENSCATG00000015632	RRP1	99	65.021	Cercocebus_atys
ENSCHIG00000020948	RRP1	94	65.972	ENSCLAG00000011639	RRP1	99	64.823	Chinchilla_lanigera
ENSCHIG00000020948	RRP1	73	76.877	ENSCSAG00000007936	RRP1	100	75.758	Chlorocebus_sabaeus
ENSCHIG00000020948	RRP1	70	35.135	ENSCING00000003304	-	73	32.945	Ciona_intestinalis
ENSCHIG00000020948	RRP1	89	60.784	ENSCANG00000042611	RRP1	84	59.653	Colobus_angolensis_palliatus
ENSCHIG00000020948	RRP1	99	64.000	ENSCGRG00001011920	Rrp1	99	62.222	Cricetulus_griseus_chok1gshd
ENSCHIG00000020948	RRP1	75	53.666	ENSCGRG00001023882	-	62	65.278	Cricetulus_griseus_chok1gshd
ENSCHIG00000020948	RRP1	99	64.000	ENSCGRG00000008915	Rrp1	99	62.222	Cricetulus_griseus_crigri
ENSCHIG00000020948	RRP1	79	47.778	ENSCSEG00000020711	-	80	43.155	Cynoglossus_semilaevis
ENSCHIG00000020948	RRP1	80	43.869	ENSCVAG00000017568	-	93	43.562	Cyprinodon_variegatus
ENSCHIG00000020948	RRP1	74	46.269	ENSDARG00000103337	rrp1	52	43.700	Danio_rerio
ENSCHIG00000020948	RRP1	100	67.238	ENSDNOG00000019880	RRP1	100	66.379	Dasypus_novemcinctus
ENSCHIG00000020948	RRP1	90	57.971	ENSDORG00000002104	Rrp1	100	57.933	Dipodomys_ordii
ENSCHIG00000020948	RRP1	72	61.963	ENSETEG00000002963	-	72	59.639	Echinops_telfairi
ENSCHIG00000020948	RRP1	98	71.041	ENSEASG00005001673	RRP1	99	71.041	Equus_asinus_asinus
ENSCHIG00000020948	RRP1	98	71.719	ENSECAG00000015703	RRP1	99	71.719	Equus_caballus
ENSCHIG00000020948	RRP1	79	43.799	ENSELUG00000015885	-	87	46.417	Esox_lucius
ENSCHIG00000020948	RRP1	91	71.602	ENSFCAG00000008434	RRP1	100	69.095	Felis_catus
ENSCHIG00000020948	RRP1	75	53.582	ENSFCAG00000010272	RRP1B	60	45.721	Felis_catus
ENSCHIG00000020948	RRP1	99	63.556	ENSFDAG00000013728	RRP1	99	62.222	Fukomys_damarensis
ENSCHIG00000020948	RRP1	79	43.137	ENSGMOG00000001953	-	54	41.823	Gadus_morhua
ENSCHIG00000020948	RRP1	80	44.875	ENSGACG00000001438	rrp1	55	43.490	Gasterosteus_aculeatus
ENSCHIG00000020948	RRP1	98	64.882	ENSGGOG00000000173	RRP1	99	65.368	Gorilla_gorilla
ENSCHIG00000020948	RRP1	94	66.434	ENSHGLG00000017085	RRP1	95	66.446	Heterocephalus_glaber_female
ENSCHIG00000020948	RRP1	74	45.014	ENSIPUG00000000673	-	71	41.444	Ictalurus_punctatus
ENSCHIG00000020948	RRP1	95	66.820	ENSSTOG00000011116	RRP1	98	66.359	Ictidomys_tridecemlineatus
ENSCHIG00000020948	RRP1	100	66.520	ENSJJAG00000018886	Rrp1	100	64.680	Jaculus_jaculus
ENSCHIG00000020948	RRP1	74	46.087	ENSKMAG00000005539	rrp1	51	46.686	Kryptolebias_marmoratus
ENSCHIG00000020948	RRP1	76	45.787	ENSLBEG00000021417	RRP1	93	45.989	Labrus_bergylta
ENSCHIG00000020948	RRP1	83	52.699	ENSLACG00000017332	-	52	51.948	Latimeria_chalumnae
ENSCHIG00000020948	RRP1	74	50.000	ENSLOCG00000004064	-	50	47.527	Lepisosteus_oculatus
ENSCHIG00000020948	RRP1	83	69.948	ENSLAFG00000022901	RRP1	100	62.716	Loxodonta_africana
ENSCHIG00000020948	RRP1	82	51.715	ENSLAFG00000000766	RRP1B	89	51.064	Loxodonta_africana
ENSCHIG00000020948	RRP1	99	66.102	ENSMFAG00000003202	RRP1	99	65.142	Macaca_fascicularis
ENSCHIG00000020948	RRP1	99	65.751	ENSMMUG00000012304	RRP1	99	65.142	Macaca_mulatta
ENSCHIG00000020948	RRP1	99	66.314	ENSMNEG00000031210	RRP1	99	65.142	Macaca_nemestrina
ENSCHIG00000020948	RRP1	90	62.963	ENSMLEG00000037797	RRP1	99	63.333	Mandrillus_leucophaeus
ENSCHIG00000020948	RRP1	99	54.889	ENSMAUG00000017653	Rrp1	98	53.556	Mesocricetus_auratus
ENSCHIG00000020948	RRP1	99	63.193	ENSMICG00000004700	RRP1	99	63.193	Microcebus_murinus
ENSCHIG00000020948	RRP1	100	53.939	ENSMOCG00000015687	Rrp1	100	53.535	Microtus_ochrogaster
ENSCHIG00000020948	RRP1	75	48.246	ENSMOCG00000001117	Rrp1b	51	44.681	Microtus_ochrogaster
ENSCHIG00000020948	RRP1	82	42.526	ENSMMOG00000019175	rrp1	98	43.299	Mola_mola
ENSCHIG00000020948	RRP1	77	60.795	ENSMODG00000021036	-	52	60.452	Monodelphis_domestica
ENSCHIG00000020948	RRP1	77	53.757	ENSMODG00000021033	RRP1B	56	47.344	Monodelphis_domestica
ENSCHIG00000020948	RRP1	79	45.983	ENSMALG00000010310	rrp1	93	45.429	Monopterus_albus
ENSCHIG00000020948	RRP1	73	50.742	MGP_CAROLIEiJ_G0021376	Rrp1b	53	66.667	Mus_caroli
ENSCHIG00000020948	RRP1	93	81.435	MGP_CAROLIEiJ_G0015508	Rrp1	80	82.096	Mus_caroli
ENSCHIG00000020948	RRP1	91	81.013	ENSMUSG00000061032	Rrp1	79	81.659	Mus_musculus
ENSCHIG00000020948	RRP1	73	51.632	ENSMUSG00000058392	Rrp1b	53	68.254	Mus_musculus
ENSCHIG00000020948	RRP1	92	81.857	MGP_PahariEiJ_G0030921	Rrp1	79	82.096	Mus_pahari
ENSCHIG00000020948	RRP1	75	52.023	MGP_PahariEiJ_G0023695	Rrp1b	60	62.500	Mus_pahari
ENSCHIG00000020948	RRP1	91	81.013	MGP_SPRETEiJ_G0016321	Rrp1	79	81.659	Mus_spretus
ENSCHIG00000020948	RRP1	73	52.522	MGP_SPRETEiJ_G0022290	Rrp1b	53	68.254	Mus_spretus
ENSCHIG00000020948	RRP1	91	62.687	ENSMPUG00000009826	RRP1	77	87.773	Mustela_putorius_furo
ENSCHIG00000020948	RRP1	99	65.261	ENSMLUG00000017788	RRP1	81	89.083	Myotis_lucifugus
ENSCHIG00000020948	RRP1	97	48.381	ENSNGAG00000022344	Rrp1	77	65.502	Nannospalax_galili
ENSCHIG00000020948	RRP1	81	47.312	ENSNGAG00000021073	Rrp1b	51	44.638	Nannospalax_galili
ENSCHIG00000020948	RRP1	99	63.889	ENSNLEG00000034734	RRP1	99	64.579	Nomascus_leucogenys
ENSCHIG00000020948	RRP1	81	63.085	ENSOPRG00000001319	RRP1	100	62.810	Ochotona_princeps
ENSCHIG00000020948	RRP1	75	60.651	ENSOANG00000006472	-	90	56.704	Ornithorhynchus_anatinus
ENSCHIG00000020948	RRP1	74	76.471	ENSOCUG00000022843	-	77	78.723	Oryctolagus_cuniculus
ENSCHIG00000020948	RRP1	75	52.212	ENSOGAG00000009872	RRP1B	51	49.854	Otolemur_garnettii
ENSCHIG00000020948	RRP1	99	63.858	ENSOGAG00000006105	RRP1	98	63.858	Otolemur_garnettii
ENSCHIG00000020948	RRP1	100	89.778	ENSOARG00000011434	RRP1	100	89.778	Ovis_aries
ENSCHIG00000020948	RRP1	99	65.171	ENSPPAG00000029050	RRP1	99	65.659	Pan_paniscus
ENSCHIG00000020948	RRP1	75	53.295	ENSPPRG00000010356	RRP1B	59	45.909	Panthera_pardus
ENSCHIG00000020948	RRP1	91	70.631	ENSPPRG00000010656	RRP1	100	68.212	Panthera_pardus
ENSCHIG00000020948	RRP1	83	59.530	ENSPTIG00000019473	RRP1	87	59.173	Panthera_tigris_altaica
ENSCHIG00000020948	RRP1	65	52.131	ENSPTIG00000016894	RRP1B	67	42.476	Panthera_tigris_altaica
ENSCHIG00000020948	RRP1	99	64.957	ENSPTRG00000013962	RRP1	99	65.443	Pan_troglodytes
ENSCHIG00000020948	RRP1	99	65.517	ENSPANG00000015097	RRP1	99	66.013	Papio_anubis
ENSCHIG00000020948	RRP1	76	38.527	ENSPMGG00000007512	-	88	38.005	Periophthalmus_magnuspinnatus
ENSCHIG00000020948	RRP1	94	64.237	ENSPEMG00000018421	Rrp1	99	64.430	Peromyscus_maniculatus_bairdii
ENSCHIG00000020948	RRP1	98	52.088	ENSPCIG00000015523	-	82	58.047	Phascolarctos_cinereus
ENSCHIG00000020948	RRP1	79	48.626	ENSPLAG00000016684	-	51	48.626	Poecilia_latipinna
ENSCHIG00000020948	RRP1	99	64.544	ENSPPYG00000011474	RRP1	99	64.488	Pongo_abelii
ENSCHIG00000020948	RRP1	52	71.795	ENSPCAG00000008370	-	99	53.867	Procavia_capensis
ENSCHIG00000020948	RRP1	99	63.877	ENSPCOG00000017706	RRP1	99	64.097	Propithecus_coquereli
ENSCHIG00000020948	RRP1	83	58.571	ENSPVAG00000009925	-	82	58.571	Pteropus_vampyrus
ENSCHIG00000020948	RRP1	100	61.538	ENSRNOG00000001203	Rrp1	100	61.926	Rattus_norvegicus
ENSCHIG00000020948	RRP1	99	64.544	ENSRBIG00000032082	RRP1	99	66.013	Rhinopithecus_bieti
ENSCHIG00000020948	RRP1	99	64.544	ENSRROG00000039799	RRP1	99	65.665	Rhinopithecus_roxellana
ENSCHIG00000020948	RRP1	90	69.586	ENSSBOG00000034689	RRP1	99	66.521	Saimiri_boliviensis_boliviensis
ENSCHIG00000020948	RRP1	68	58.576	ENSSHAG00000010304	-	94	57.980	Sarcophilus_harrisii
ENSCHIG00000020948	RRP1	69	46.224	ENSSFOG00015003932	-	54	43.909	Scleropages_formosus
ENSCHIG00000020948	RRP1	79	45.946	ENSSMAG00000016847	-	80	47.706	Scophthalmus_maximus
ENSCHIG00000020948	RRP1	75	54.571	ENSSPUG00000002834	RRP1B	50	48.492	Sphenodon_punctatus
ENSCHIG00000020948	RRP1	83	49.604	ENSSSCG00000021698	RRP1B	57	48.421	Sus_scrofa
ENSCHIG00000020948	RRP1	99	76.211	ENSSSCG00000037061	RRP1	100	76.652	Sus_scrofa
ENSCHIG00000020948	RRP1	76	47.965	ENSTRUG00000017592	rrp1	97	47.674	Takifugu_rubripes
ENSCHIG00000020948	RRP1	75	46.667	ENSTNIG00000005053	rrp1	55	47.262	Tetraodon_nigroviridis
ENSCHIG00000020948	RRP1	65	73.826	ENSTBEG00000001260	-	64	73.381	Tupaia_belangeri
ENSCHIG00000020948	RRP1	83	44.081	ENSTBEG00000000422	RRP1B	51	50.338	Tupaia_belangeri
ENSCHIG00000020948	RRP1	83	80.000	ENSTTRG00000011162	RRP1	82	80.000	Tursiops_truncatus
ENSCHIG00000020948	RRP1	72	59.271	ENSUAMG00000014189	-	97	58.663	Ursus_americanus
ENSCHIG00000020948	RRP1	86	49.875	ENSUAMG00000026765	RRP1B	57	49.373	Ursus_americanus
ENSCHIG00000020948	RRP1	89	65.764	ENSUMAG00000025507	RRP1	98	64.083	Ursus_maritimus
ENSCHIG00000020948	RRP1	73	48.538	ENSUMAG00000025510	RRP1B	65	47.953	Ursus_maritimus
ENSCHIG00000020948	RRP1	67	58.333	ENSVVUG00000024498	-	77	57.692	Vulpes_vulpes