EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000021040 (Gene tree)
Gene ID: 102189876
Gene Symbol: -
Alias: -
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 10453 bases
Position: chr12:54225759-54236211
Accession: 102189876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000023494	zf-C2H2	PF00096.26	2.1e-30	1	7
ENSCHIP00000023494	zf-C2H2	PF00096.26	2.1e-30	2	7
ENSCHIP00000023494	zf-C2H2	PF00096.26	2.1e-30	3	7
ENSCHIP00000023494	zf-C2H2	PF00096.26	2.1e-30	4	7
ENSCHIP00000023494	zf-C2H2	PF00096.26	2.1e-30	5	7
ENSCHIP00000023494	zf-C2H2	PF00096.26	2.1e-30	6	7
ENSCHIP00000023494	zf-C2H2	PF00096.26	2.1e-30	7	7
ENSCHIP00000023494	zf-met	PF12874.7	7.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000031354	-	1269	XM_013968228	ENSCHIP00000023494	422 (aa)	XP_013823682	UPI0008466325

Gene Model

Click here to download ENSCHIG00000021040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000021040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000021040	-	85	98.599	ENSCHIG00000010341	-	100	98.599
ENSCHIG00000021040	-	62	36.641	ENSCHIG00000014415	ZNF81	68	36.641

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000021040	-	84	81.742	ENSAMEG00000015824	GTF3A	98	82.022	Ailuropoda_melanoleuca
ENSCHIG00000021040	-	85	96.919	ENSBTAG00000012600	GTF3A	100	96.919	Bos_taurus
ENSCHIG00000021040	-	84	81.180	ENSCAFG00000006794	GTF3A	98	81.180	Canis_familiaris
ENSCHIG00000021040	-	77	77.204	ENSTSYG00000004206	GTF3A	98	77.508	Carlito_syrichta
ENSCHIG00000021040	-	74	80.505	ENSCAPG00000015862	GTF3A	99	79.297	Cavia_aperea
ENSCHIG00000021040	-	77	78.659	ENSCPOG00000010143	GTF3A	99	79.573	Cavia_porcellus
ENSCHIG00000021040	-	74	81.150	ENSCLAG00000003912	GTF3A	95	82.748	Chinchilla_lanigera
ENSCHIG00000021040	-	84	77.159	ENSDNOG00000037405	-	98	70.574	Dasypus_novemcinctus
ENSCHIG00000021040	-	65	79.703	ENSETEG00000003225	GTF3A	81	74.009	Echinops_telfairi
ENSCHIG00000021040	-	87	79.620	ENSEASG00005022495	-	94	74.118	Equus_asinus_asinus
ENSCHIG00000021040	-	76	72.755	ENSEASG00005013216	-	86	72.755	Equus_asinus_asinus
ENSCHIG00000021040	-	87	80.541	ENSECAG00000014803	GTF3A	94	75.000	Equus_caballus
ENSCHIG00000021040	-	77	77.846	ENSECAG00000024825	-	75	77.846	Equus_caballus
ENSCHIG00000021040	-	84	78.273	ENSEEUG00000004307	GTF3A	96	74.680	Erinaceus_europaeus
ENSCHIG00000021040	-	84	82.682	ENSFCAG00000006982	GTF3A	83	82.682	Felis_catus
ENSCHIG00000021040	-	73	83.654	ENSFDAG00000016841	GTF3A	96	83.974	Fukomys_damarensis
ENSCHIG00000021040	-	73	84.244	ENSHGLG00000004173	GTF3A	97	84.887	Heterocephalus_glaber_female
ENSCHIG00000021040	-	73	84.244	ENSHGLG00100011561	GTF3A	97	84.887	Heterocephalus_glaber_male
ENSCHIG00000021040	-	74	82.109	ENSSTOG00000013853	GTF3A	100	83.387	Ictidomys_tridecemlineatus
ENSCHIG00000021040	-	73	76.351	ENSJJAG00000011501	Gtf3a	95	76.351	Jaculus_jaculus
ENSCHIG00000021040	-	84	74.656	ENSLAFG00000027315	GTF3A	98	74.656	Loxodonta_africana
ENSCHIG00000021040	-	84	76.536	ENSMAUG00000016253	Gtf3a	95	77.493	Mesocricetus_auratus
ENSCHIG00000021040	-	84	78.889	ENSMICG00000014763	GTF3A	97	80.000	Microcebus_murinus
ENSCHIG00000021040	-	80	80.000	MGP_CAROLIEiJ_G0028031	Gtf3a	97	78.012	Mus_caroli
ENSCHIG00000021040	-	80	80.000	ENSMUSG00000016503	Gtf3a	93	80.000	Mus_musculus
ENSCHIG00000021040	-	78	79.940	MGP_PahariEiJ_G0024597	Gtf3a	94	79.503	Mus_pahari
ENSCHIG00000021040	-	83	78.409	MGP_SPRETEiJ_G0029029	Gtf3a	97	78.409	Mus_spretus
ENSCHIG00000021040	-	85	80.886	ENSMPUG00000005835	GTF3A	98	81.163	Mustela_putorius_furo
ENSCHIG00000021040	-	78	85.152	ENSMLUG00000002158	GTF3A	99	85.455	Myotis_lucifugus
ENSCHIG00000021040	-	84	80.447	ENSNLEG00000000331	GTF3A	98	80.726	Nomascus_leucogenys
ENSCHIG00000021040	-	76	55.864	ENSMEUG00000010089	GTF3A	97	55.389	Notamacropus_eugenii
ENSCHIG00000021040	-	84	70.787	ENSOPRG00000000854	-	94	66.921	Ochotona_princeps
ENSCHIG00000021040	-	93	74.055	ENSODEG00000006725	GTF3A	92	75.063	Octodon_degus
ENSCHIG00000021040	-	84	80.618	ENSOCUG00000011713	GTF3A	81	80.618	Oryctolagus_cuniculus
ENSCHIG00000021040	-	84	78.830	ENSOGAG00000014589	GTF3A	98	79.666	Otolemur_garnettii
ENSCHIG00000021040	-	86	94.215	ENSOARG00000012551	GTF3A	100	94.215	Ovis_aries
ENSCHIG00000021040	-	84	83.146	ENSPPRG00000002368	GTF3A	98	83.146	Panthera_pardus
ENSCHIG00000021040	-	76	82.131	ENSPTIG00000018958	GTF3A	80	82.131	Panthera_tigris_altaica
ENSCHIG00000021040	-	70	53.913	ENSPSIG00000011722	GTF3A	84	53.913	Pelodiscus_sinensis
ENSCHIG00000021040	-	82	79.830	ENSPPYG00000005235	GTF3A	98	80.114	Pongo_abelii
ENSCHIG00000021040	-	84	77.008	ENSPCOG00000016742	GTF3A	92	71.801	Propithecus_coquereli
ENSCHIG00000021040	-	96	73.464	ENSPVAG00000012837	GTF3A	94	73.464	Pteropus_vampyrus
ENSCHIG00000021040	-	84	72.905	ENSRROG00000043264	GTF3A	98	73.184	Rhinopithecus_roxellana
ENSCHIG00000021040	-	76	75.078	ENSSHAG00000016965	GTF3A	93	73.716	Sarcophilus_harrisii
ENSCHIG00000021040	-	74	71.246	ENSSARG00000010692	GTF3A	86	71.885	Sorex_araneus
ENSCHIG00000021040	-	72	68.404	ENSSPUG00000005307	GTF3A	91	64.497	Sphenodon_punctatus
ENSCHIG00000021040	-	71	44.554	ENSTRUG00000005241	gtf3ab	87	44.884	Takifugu_rubripes
ENSCHIG00000021040	-	67	82.812	ENSTBEG00000012075	GTF3A	61	82.812	Tupaia_belangeri
ENSCHIG00000021040	-	93	73.935	ENSTTRG00000008538	GTF3A	95	73.935	Tursiops_truncatus
ENSCHIG00000021040	-	84	81.461	ENSUAMG00000019189	GTF3A	98	81.742	Ursus_americanus
ENSCHIG00000021040	-	77	79.939	ENSUMAG00000016941	GTF3A	100	83.389	Ursus_maritimus
ENSCHIG00000021040	-	74	81.818	ENSVPAG00000004995	GTF3A	96	82.168	Vicugna_pacos
ENSCHIG00000021040	-	84	80.282	ENSVVUG00000009197	GTF3A	98	80.282	Vulpes_vulpes