EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000021052 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1869 bases
Position: chr14:87809700-87811568
Accession: 106502806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000023515	RRM_1	PF00076.22	4.2e-59	1	4
ENSCHIP00000023515	RRM_1	PF00076.22	4.2e-59	2	4
ENSCHIP00000023515	RRM_1	PF00076.22	4.2e-59	3	4
ENSCHIP00000023515	RRM_1	PF00076.22	4.2e-59	4	4
ENSCHIP00000023521	RRM_1	PF00076.22	1.1e-43	1	3
ENSCHIP00000023521	RRM_1	PF00076.22	1.1e-43	2	3
ENSCHIP00000023521	RRM_1	PF00076.22	1.1e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000031381	-	1425	-	ENSCHIP00000023521	474 (aa)	-	UPI000D192B60
ENSCHIT00000031375	-	1851	XM_018058810	ENSCHIP00000023515	616 (aa)	XP_017914299	UPI000D194696

Gene Model

Click here to download ENSCHIG00000021052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000021052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000021052	-	77	62.143	ENSCHIG00000012665	-	73	68.245
ENSCHIG00000021052	-	54	33.871	ENSCHIG00000020214	TIA1	93	33.858
ENSCHIG00000021052	-	87	77.876	ENSCHIG00000012143	-	92	77.876
ENSCHIG00000021052	-	83	98.252	ENSCHIG00000010894	-	69	98.673
ENSCHIG00000021052	-	55	30.072	ENSCHIG00000023714	PABPC1	96	30.000
ENSCHIG00000021052	-	55	30.072	ENSCHIG00000019398	-	54	30.072
ENSCHIG00000021052	-	89	68.558	ENSCHIG00000003401	-	85	79.646
ENSCHIG00000021052	-	90	84.507	ENSCHIG00000026149	-	74	88.391

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000021052	-	94	96.503	ENSG00000115053	NCL	100	88.851	Homo_sapiens
ENSCHIG00000021052	-	96	96.853	ENSAMEG00000016289	NCL	75	96.903	Ailuropoda_melanoleuca
ENSCHIG00000021052	-	90	96.503	ENSANAG00000035814	-	74	96.460	Aotus_nancymaae
ENSCHIG00000021052	-	100	70.464	ENSANAG00000024378	-	81	78.030	Aotus_nancymaae
ENSCHIG00000021052	-	84	80.750	ENSBTAG00000051320	-	86	81.886	Bos_taurus
ENSCHIG00000021052	-	94	97.909	ENSBTAG00000016174	NCL	74	98.673	Bos_taurus
ENSCHIG00000021052	-	87	84.541	ENSBTAG00000026909	-	95	92.642	Bos_taurus
ENSCHIG00000021052	-	100	83.058	ENSBTAG00000050728	-	81	92.958	Bos_taurus
ENSCHIG00000021052	-	100	96.503	ENSCJAG00000013538	NCL	79	96.460	Callithrix_jacchus
ENSCHIG00000021052	-	97	96.154	ENSCAFG00000011037	NCL	91	96.903	Canis_familiaris
ENSCHIG00000021052	-	86	96.853	ENSCAFG00020023145	NCL	86	96.903	Canis_lupus_dingo
ENSCHIG00000021052	-	81	95.595	ENSTSYG00000004355	-	74	96.018	Carlito_syrichta
ENSCHIG00000021052	-	75	81.395	ENSTSYG00000036886	-	54	81.941	Carlito_syrichta
ENSCHIG00000021052	-	85	94.521	ENSTSYG00000029779	-	98	92.667	Carlito_syrichta
ENSCHIG00000021052	-	94	94.755	ENSCAPG00000009405	NCL	74	94.248	Cavia_aperea
ENSCHIG00000021052	-	96	94.425	ENSCPOG00000001034	NCL	92	94.248	Cavia_porcellus
ENSCHIG00000021052	-	50	86.432	ENSCCAG00000000551	-	93	70.479	Cebus_capucinus
ENSCHIG00000021052	-	66	93.007	ENSCCAG00000021040	-	74	96.460	Cebus_capucinus
ENSCHIG00000021052	-	100	96.503	ENSCATG00000037033	NCL	92	96.460	Cercocebus_atys
ENSCHIG00000021052	-	94	94.425	ENSCLAG00000013080	NCL	92	94.248	Chinchilla_lanigera
ENSCHIG00000021052	-	70	93.636	ENSCSAG00000006660	NCL	95	93.622	Chlorocebus_sabaeus
ENSCHIG00000021052	-	59	80.163	ENSCHOG00000012860	NCL	79	84.444	Choloepus_hoffmanni
ENSCHIG00000021052	-	61	92.063	ENSCANG00000036756	NCL	92	90.909	Colobus_angolensis_palliatus
ENSCHIG00000021052	-	83	81.858	ENSCGRG00001022350	-	95	81.532	Cricetulus_griseus_chok1gshd
ENSCHIG00000021052	-	51	92.070	ENSCGRG00001024315	-	68	92.070	Cricetulus_griseus_chok1gshd
ENSCHIG00000021052	-	72	92.070	ENSCGRG00000017894	-	77	92.070	Cricetulus_griseus_crigri
ENSCHIG00000021052	-	81	81.858	ENSCGRG00000000507	-	53	81.532	Cricetulus_griseus_crigri
ENSCHIG00000021052	-	100	70.251	ENSDNOG00000010783	-	77	95.614	Dasypus_novemcinctus
ENSCHIG00000021052	-	94	81.944	ENSDNOG00000046347	-	85	78.685	Dasypus_novemcinctus
ENSCHIG00000021052	-	79	78.873	ENSDORG00000023596	-	52	77.698	Dipodomys_ordii
ENSCHIG00000021052	-	86	85.043	ENSDORG00000012513	-	82	85.408	Dipodomys_ordii
ENSCHIG00000021052	-	89	59.292	ENSETEG00000008139	-	99	58.127	Echinops_telfairi
ENSCHIG00000021052	-	72	92.952	ENSETEG00000018937	-	73	88.391	Echinops_telfairi
ENSCHIG00000021052	-	72	59.243	ENSETEG00000008553	-	79	62.933	Echinops_telfairi
ENSCHIG00000021052	-	60	87.798	ENSETEG00000014756	-	86	87.863	Echinops_telfairi
ENSCHIG00000021052	-	90	97.203	ENSEASG00005008488	NCL	100	85.417	Equus_asinus_asinus
ENSCHIG00000021052	-	94	96.864	ENSECAG00000021868	NCL	87	97.345	Equus_caballus
ENSCHIG00000021052	-	77	89.823	ENSEEUG00000005913	NCL	62	74.603	Erinaceus_europaeus
ENSCHIG00000021052	-	95	96.503	ENSFCAG00000027622	NCL	73	94.195	Felis_catus
ENSCHIG00000021052	-	93	94.774	ENSFDAG00000014291	NCL	92	94.690	Fukomys_damarensis
ENSCHIG00000021052	-	94	96.503	ENSGGOG00000004300	NCL	100	84.631	Gorilla_gorilla
ENSCHIG00000021052	-	99	94.774	ENSHGLG00000002031	-	92	94.690	Heterocephalus_glaber_female
ENSCHIG00000021052	-	90	81.364	ENSHGLG00000005133	-	88	81.416	Heterocephalus_glaber_female
ENSCHIG00000021052	-	77	89.286	ENSHGLG00000011069	-	56	89.381	Heterocephalus_glaber_female
ENSCHIG00000021052	-	90	74.957	ENSHGLG00100000745	-	60	88.053	Heterocephalus_glaber_male
ENSCHIG00000021052	-	99	94.425	ENSHGLG00100014537	-	92	94.248	Heterocephalus_glaber_male
ENSCHIG00000021052	-	100	84.472	ENSJJAG00000016165	Ncl	93	78.243	Jaculus_jaculus
ENSCHIG00000021052	-	91	78.761	ENSLAFG00000013061	NCL	77	81.102	Loxodonta_africana
ENSCHIG00000021052	-	94	96.503	ENSMFAG00000040385	NCL	85	96.460	Macaca_fascicularis
ENSCHIG00000021052	-	94	96.503	ENSMMUG00000018094	NCL	100	84.646	Macaca_mulatta
ENSCHIG00000021052	-	64	96.503	ENSMNEG00000023839	NCL	91	96.460	Macaca_nemestrina
ENSCHIG00000021052	-	100	96.503	ENSMLEG00000028935	NCL	92	96.460	Mandrillus_leucophaeus
ENSCHIG00000021052	-	90	80.258	ENSMICG00000029975	-	86	78.431	Microcebus_murinus
ENSCHIG00000021052	-	98	96.503	ENSMICG00000002538	-	76	96.460	Microcebus_murinus
ENSCHIG00000021052	-	85	87.225	MGP_CAROLIEiJ_G0014362	Ncl	92	87.225	Mus_caroli
ENSCHIG00000021052	-	81	87.225	ENSMUSG00000026234	Ncl	92	87.225	Mus_musculus
ENSCHIG00000021052	-	86	84.367	MGP_PahariEiJ_G0027599	Ncl	72	84.367	Mus_pahari
ENSCHIG00000021052	-	82	87.225	MGP_SPRETEiJ_G0015164	Ncl	75	87.225	Mus_spretus
ENSCHIG00000021052	-	100	96.167	ENSMLUG00000014547	NCL	77	96.903	Myotis_lucifugus
ENSCHIG00000021052	-	81	92.070	ENSNGAG00000002454	-	74	86.548	Nannospalax_galili
ENSCHIG00000021052	-	81	72.432	ENSNGAG00000006188	-	73	70.712	Nannospalax_galili
ENSCHIG00000021052	-	81	85.263	ENSNLEG00000014107	-	85	69.091	Nomascus_leucogenys
ENSCHIG00000021052	-	77	91.556	ENSODEG00000002748	-	59	89.785	Octodon_degus
ENSCHIG00000021052	-	89	74.265	ENSODEG00000007803	-	56	71.324	Octodon_degus
ENSCHIG00000021052	-	80	86.726	ENSODEG00000002441	-	83	86.726	Octodon_degus
ENSCHIG00000021052	-	97	89.547	ENSODEG00000003281	-	90	89.860	Octodon_degus
ENSCHIG00000021052	-	92	93.007	ENSOCUG00000004312	NCL	67	90.888	Oryctolagus_cuniculus
ENSCHIG00000021052	-	81	96.018	ENSOGAG00000027852	NCL	78	96.018	Otolemur_garnettii
ENSCHIG00000021052	-	75	96.875	ENSOARG00000013710	-	63	94.879	Ovis_aries
ENSCHIG00000021052	-	55	96.943	ENSOARG00000020709	-	92	96.943	Ovis_aries
ENSCHIG00000021052	-	76	76.654	ENSOARG00000004072	-	61	78.364	Ovis_aries
ENSCHIG00000021052	-	86	89.583	ENSOARG00000013270	-	65	93.407	Ovis_aries
ENSCHIG00000021052	-	94	96.503	ENSPPAG00000011619	NCL	100	84.836	Pan_paniscus
ENSCHIG00000021052	-	98	96.503	ENSPPRG00000012603	NCL	73	93.931	Panthera_pardus
ENSCHIG00000021052	-	97	96.503	ENSPTIG00000010393	NCL	72	93.931	Panthera_tigris_altaica
ENSCHIG00000021052	-	100	96.503	ENSPTRG00000013025	NCL	100	84.836	Pan_troglodytes
ENSCHIG00000021052	-	94	96.503	ENSPANG00000010292	NCL	74	96.460	Papio_anubis
ENSCHIG00000021052	-	94	96.503	ENSPPYG00000013265	NCL	74	96.460	Pongo_abelii
ENSCHIG00000021052	-	87	92.825	ENSPCOG00000004160	-	94	92.920	Propithecus_coquereli
ENSCHIG00000021052	-	87	96.903	ENSPCOG00000003051	-	91	96.903	Propithecus_coquereli
ENSCHIG00000021052	-	94	96.516	ENSPVAG00000000297	NCL	92	96.903	Pteropus_vampyrus
ENSCHIG00000021052	-	81	91.189	ENSRNOG00000018273	Ncl	92	91.189	Rattus_norvegicus
ENSCHIG00000021052	-	80	96.460	ENSRBIG00000037525	-	74	96.460	Rhinopithecus_bieti
ENSCHIG00000021052	-	70	95.502	ENSRBIG00000035396	-	93	95.575	Rhinopithecus_bieti
ENSCHIG00000021052	-	99	88.028	ENSRROG00000036103	-	86	94.915	Rhinopithecus_roxellana
ENSCHIG00000021052	-	84	96.460	ENSRROG00000028756	-	74	96.460	Rhinopithecus_roxellana
ENSCHIG00000021052	-	90	89.860	ENSSBOG00000027549	-	100	76.640	Saimiri_boliviensis_boliviensis
ENSCHIG00000021052	-	90	96.503	ENSSBOG00000029193	-	73	92.876	Saimiri_boliviensis_boliviensis
ENSCHIG00000021052	-	85	64.916	ENSSBOG00000023094	-	89	65.770	Saimiri_boliviensis_boliviensis
ENSCHIG00000021052	-	83	96.460	ENSSSCG00000016275	NCL	92	96.460	Sus_scrofa
ENSCHIG00000021052	-	81	85.088	ENSTBEG00000001546	-	75	80.211	Tupaia_belangeri
ENSCHIG00000021052	-	85	74.737	ENSTBEG00000002469	-	66	79.714	Tupaia_belangeri
ENSCHIG00000021052	-	81	95.154	ENSTTRG00000009094	NCL	68	95.575	Tursiops_truncatus
ENSCHIG00000021052	-	81	96.853	ENSUAMG00000005639	NCL	87	94.533	Ursus_americanus
ENSCHIG00000021052	-	99	96.853	ENSUMAG00000015789	NCL	92	96.903	Ursus_maritimus
ENSCHIG00000021052	-	93	87.324	ENSVPAG00000001796	NCL	69	87.324	Vicugna_pacos
ENSCHIG00000021052	-	90	96.154	ENSVVUG00000025564	NCL	54	96.018	Vulpes_vulpes