EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000021134 (Gene tree)
Gene ID: 102168507
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 15523 bases
Position: chr24:50090852-50106374
Accession: 102168507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000023655	MBD	PF01429.19	2.8e-16	1	1
ENSCHIP00000023647	MBD	PF01429.19	3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000031507	MBD1-201	3738	XM_005697202	ENSCHIP00000023647	630 (aa)	XP_005697259	UPI000D1945E1
ENSCHIT00000031515	MBD1-202	3407	XM_005697201	ENSCHIP00000023655	605 (aa)	XP_005697258	UPI000D192150

Gene Model

Click here to download ENSCHIG00000021134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000021134's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000021134	MBD1	100	86.529	ENSG00000141644	MBD1	99	92.517	Homo_sapiens
ENSCHIG00000021134	MBD1	63	35.678	ENSAPOG00000012810	mbd1b	51	36.548	Acanthochromis_polyacanthus
ENSCHIG00000021134	MBD1	100	88.608	ENSAMEG00000000238	MBD1	96	88.924	Ailuropoda_melanoleuca
ENSCHIG00000021134	MBD1	65	44.203	ENSACAG00000006091	-	100	43.951	Anolis_carolinensis
ENSCHIG00000021134	MBD1	100	86.212	ENSANAG00000036253	MBD1	100	86.054	Aotus_nancymaae
ENSCHIG00000021134	MBD1	59	36.364	ENSACLG00000021383	mbd1b	50	37.129	Astatotilapia_calliptera
ENSCHIG00000021134	MBD1	100	98.415	ENSBTAG00000003801	MBD1	100	98.415	Bos_taurus
ENSCHIG00000021134	MBD1	100	84.292	ENSCJAG00000004959	MBD1	100	84.137	Callithrix_jacchus
ENSCHIG00000021134	MBD1	100	87.975	ENSCAFG00000018928	MBD1	96	88.449	Canis_familiaris
ENSCHIG00000021134	MBD1	99	87.340	ENSCAFG00020024272	MBD1	97	87.821	Canis_lupus_dingo
ENSCHIG00000021134	MBD1	100	85.737	ENSTSYG00000000509	MBD1	100	85.578	Carlito_syrichta
ENSCHIG00000021134	MBD1	98	64.653	ENSCAPG00000015782	MBD1	96	64.350	Cavia_aperea
ENSCHIG00000021134	MBD1	100	72.162	ENSCPOG00000001671	MBD1	100	69.829	Cavia_porcellus
ENSCHIG00000021134	MBD1	100	84.304	ENSCCAG00000034600	MBD1	100	76.032	Cebus_capucinus
ENSCHIG00000021134	MBD1	100	86.688	ENSCATG00000029959	MBD1	100	86.529	Cercocebus_atys
ENSCHIG00000021134	MBD1	100	83.360	ENSCLAG00000007457	MBD1	89	83.360	Chinchilla_lanigera
ENSCHIG00000021134	MBD1	100	86.634	ENSCSAG00000018070	MBD1	100	86.469	Chlorocebus_sabaeus
ENSCHIG00000021134	MBD1	100	86.688	ENSCANG00000033425	MBD1	100	86.529	Colobus_angolensis_palliatus
ENSCHIG00000021134	MBD1	100	72.787	ENSCGRG00001014843	Mbd1	100	72.295	Cricetulus_griseus_chok1gshd
ENSCHIG00000021134	MBD1	99	51.037	ENSCGRG00000014135	Mbd1	96	64.329	Cricetulus_griseus_crigri
ENSCHIG00000021134	MBD1	100	81.487	ENSDNOG00000015998	MBD1	100	82.808	Dasypus_novemcinctus
ENSCHIG00000021134	MBD1	99	67.559	ENSDORG00000013917	Mbd1	97	77.982	Dipodomys_ordii
ENSCHIG00000021134	MBD1	100	90.190	ENSEASG00005003857	MBD1	100	90.190	Equus_asinus_asinus
ENSCHIG00000021134	MBD1	100	89.621	ENSECAG00000011497	MBD1	80	89.621	Equus_caballus
ENSCHIG00000021134	MBD1	100	88.924	ENSFCAG00000015730	MBD1	100	89.241	Felis_catus
ENSCHIG00000021134	MBD1	99	69.856	ENSFDAG00000011085	MBD1	96	69.856	Fukomys_damarensis
ENSCHIG00000021134	MBD1	100	86.371	ENSGGOG00000016966	MBD1	100	86.212	Gorilla_gorilla
ENSCHIG00000021134	MBD1	100	83.677	ENSHGLG00000008740	MBD1	100	83.677	Heterocephalus_glaber_female
ENSCHIG00000021134	MBD1	84	87.948	ENSHGLG00100005198	MBD1	100	88.197	Heterocephalus_glaber_male
ENSCHIG00000021134	MBD1	100	80.519	ENSSTOG00000007780	MBD1	100	79.837	Ictidomys_tridecemlineatus
ENSCHIG00000021134	MBD1	98	66.833	ENSJJAG00000022859	Mbd1	96	66.332	Jaculus_jaculus
ENSCHIG00000021134	MBD1	65	40.152	ENSLACG00000002414	-	52	62.500	Latimeria_chalumnae
ENSCHIG00000021134	MBD1	99	75.497	ENSLAFG00000031328	MBD1	97	75.000	Loxodonta_africana
ENSCHIG00000021134	MBD1	100	87.322	ENSMFAG00000026335	MBD1	100	86.529	Macaca_fascicularis
ENSCHIG00000021134	MBD1	100	87.322	ENSMMUG00000009050	MBD1	100	86.529	Macaca_mulatta
ENSCHIG00000021134	MBD1	100	87.322	ENSMNEG00000038822	MBD1	100	86.529	Macaca_nemestrina
ENSCHIG00000021134	MBD1	100	86.688	ENSMLEG00000043121	MBD1	100	86.529	Mandrillus_leucophaeus
ENSCHIG00000021134	MBD1	59	36.364	ENSMZEG00005010421	mbd1b	50	37.129	Maylandia_zebra
ENSCHIG00000021134	MBD1	100	84.740	ENSMICG00000006414	MBD1	100	86.310	Microcebus_murinus
ENSCHIG00000021134	MBD1	66	41.259	ENSMODG00000001286	-	57	42.079	Monodelphis_domestica
ENSCHIG00000021134	MBD1	99	65.293	ENSMUSG00000024561	Mbd1	97	64.865	Mus_musculus
ENSCHIG00000021134	MBD1	100	65.823	MGP_PahariEiJ_G0019128	Mbd1	100	65.714	Mus_pahari
ENSCHIG00000021134	MBD1	98	66.882	MGP_SPRETEiJ_G0023304	Mbd1	99	66.451	Mus_spretus
ENSCHIG00000021134	MBD1	100	88.133	ENSMPUG00000008843	MBD1	96	88.449	Mustela_putorius_furo
ENSCHIG00000021134	MBD1	100	87.956	ENSMLUG00000008286	MBD1	96	87.797	Myotis_lucifugus
ENSCHIG00000021134	MBD1	98	66.667	ENSNGAG00000011412	Mbd1	96	66.007	Nannospalax_galili
ENSCHIG00000021134	MBD1	98	68.581	ENSNLEG00000032711	-	88	63.682	Nomascus_leucogenys
ENSCHIG00000021134	MBD1	100	86.634	ENSNLEG00000011661	-	100	85.974	Nomascus_leucogenys
ENSCHIG00000021134	MBD1	100	72.442	ENSOPRG00000007647	MBD1	100	72.442	Ochotona_princeps
ENSCHIG00000021134	MBD1	99	69.717	ENSODEG00000018451	MBD1	97	72.027	Octodon_degus
ENSCHIG00000021134	MBD1	59	36.364	ENSONIG00000020289	mbd1b	52	35.922	Oreochromis_niloticus
ENSCHIG00000021134	MBD1	85	47.538	ENSOANG00000014593	-	100	44.784	Ornithorhynchus_anatinus
ENSCHIG00000021134	MBD1	100	81.775	ENSOCUG00000006554	MBD1	100	82.092	Oryctolagus_cuniculus
ENSCHIG00000021134	MBD1	100	82.527	ENSOGAG00000003784	MBD1	96	81.719	Otolemur_garnettii
ENSCHIG00000021134	MBD1	100	99.367	ENSOARG00000004218	MBD1	95	99.367	Ovis_aries
ENSCHIG00000021134	MBD1	100	86.304	ENSPPAG00000038886	MBD1	100	86.139	Pan_paniscus
ENSCHIG00000021134	MBD1	100	89.082	ENSPPRG00000021387	MBD1	100	89.399	Panthera_pardus
ENSCHIG00000021134	MBD1	100	88.924	ENSPTIG00000021231	MBD1	100	89.241	Panthera_tigris_altaica
ENSCHIG00000021134	MBD1	100	86.371	ENSPTRG00000010021	MBD1	100	86.212	Pan_troglodytes
ENSCHIG00000021134	MBD1	100	86.529	ENSPANG00000010867	MBD1	100	86.371	Papio_anubis
ENSCHIG00000021134	MBD1	99	59.319	ENSPEMG00000022630	Mbd1	97	58.766	Peromyscus_maniculatus_bairdii
ENSCHIG00000021134	MBD1	96	48.161	ENSPCIG00000027937	-	79	46.266	Phascolarctos_cinereus
ENSCHIG00000021134	MBD1	57	53.846	ENSPMEG00000024145	mbd1b	50	56.667	Poecilia_mexicana
ENSCHIG00000021134	MBD1	100	87.129	ENSPPYG00000009158	MBD1	91	86.304	Pongo_abelii
ENSCHIG00000021134	MBD1	99	76.238	ENSPCAG00000001648	MBD1	93	87.500	Procavia_capensis
ENSCHIG00000021134	MBD1	100	87.479	ENSPCOG00000012450	MBD1	100	89.602	Propithecus_coquereli
ENSCHIG00000021134	MBD1	99	51.864	ENSRNOG00000024104	Mbd1	96	49.191	Rattus_norvegicus
ENSCHIG00000021134	MBD1	100	80.349	ENSRBIG00000041294	MBD1	100	80.190	Rhinopithecus_bieti
ENSCHIG00000021134	MBD1	100	86.529	ENSRROG00000032517	MBD1	100	86.371	Rhinopithecus_roxellana
ENSCHIG00000021134	MBD1	98	87.015	ENSSBOG00000027169	MBD1	100	76.825	Saimiri_boliviensis_boliviensis
ENSCHIG00000021134	MBD1	76	47.222	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSCHIG00000021134	MBD1	100	88.284	ENSSSCG00000004516	MBD1	100	88.284	Sus_scrofa
ENSCHIG00000021134	MBD1	68	81.250	ENSTBEG00000012651	-	68	81.250	Tupaia_belangeri
ENSCHIG00000021134	MBD1	100	87.974	ENSTTRG00000015523	MBD1	100	88.303	Tursiops_truncatus
ENSCHIG00000021134	MBD1	100	84.653	ENSUAMG00000004752	MBD1	100	82.838	Ursus_americanus
ENSCHIG00000021134	MBD1	100	88.138	ENSUMAG00000002947	MBD1	100	88.468	Ursus_maritimus