EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000021295 (Gene tree)
Gene ID: 102175074
Gene Symbol: GPATCH4
Alias: DKFZP434F1735|FLJ20249|GPATC4
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 4088 bases
Position: chr3:105881643-105885730
Accession: 102175074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000023882	G-patch	PF01585.23	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000031742	GPATCH4-201	1276	XM_005677341	ENSCHIP00000023882	405 (aa)	XP_005677398	UPI0008466CB4
ENSCHIT00000031748	GPATCH4-202	1185	-	ENSCHIP00000023888	394 (aa)	-	UPI000D197249

Gene Model

Click here to download ENSCHIG00000021295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000021295's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000021295	GPATCH4	85	75.354	ENSG00000160818	GPATCH4	95	91.150	Homo_sapiens
ENSCHIG00000021295	GPATCH4	94	65.455	ENSAMEG00000014829	GPATCH4	91	65.128	Ailuropoda_melanoleuca
ENSCHIG00000021295	GPATCH4	95	69.727	ENSANAG00000035354	GPATCH4	94	71.143	Aotus_nancymaae
ENSCHIG00000021295	GPATCH4	71	36.393	ENSACLG00000010456	gpatch4	58	53.000	Astatotilapia_calliptera
ENSCHIG00000021295	GPATCH4	100	92.195	ENSBTAG00000000406	GPATCH4	100	91.951	Bos_taurus
ENSCHIG00000021295	GPATCH4	83	73.487	ENSCJAG00000006048	GPATCH4	92	90.179	Callithrix_jacchus
ENSCHIG00000021295	GPATCH4	94	62.113	ENSCAFG00000016788	GPATCH4	79	64.773	Canis_familiaris
ENSCHIG00000021295	GPATCH4	83	73.851	ENSCCAG00000036114	GPATCH4	92	90.179	Cebus_capucinus
ENSCHIG00000021295	GPATCH4	95	73.232	ENSCATG00000042152	GPATCH4	98	77.143	Cercocebus_atys
ENSCHIG00000021295	GPATCH4	95	64.359	ENSCLAG00000002967	-	89	63.590	Chinchilla_lanigera
ENSCHIG00000021295	GPATCH4	99	68.852	ENSCSAG00000002161	GPATCH4	88	72.265	Chlorocebus_sabaeus
ENSCHIG00000021295	GPATCH4	82	74.269	ENSCANG00000030031	GPATCH4	98	77.143	Colobus_angolensis_palliatus
ENSCHIG00000021295	GPATCH4	98	54.009	ENSCGRG00001016898	Gpatch4	98	53.286	Cricetulus_griseus_chok1gshd
ENSCHIG00000021295	GPATCH4	85	61.932	ENSCGRG00000008399	Gpatch4	84	61.236	Cricetulus_griseus_crigri
ENSCHIG00000021295	GPATCH4	95	70.332	ENSDNOG00000034673	GPATCH4	87	70.361	Dasypus_novemcinctus
ENSCHIG00000021295	GPATCH4	95	60.152	ENSETEG00000000659	-	88	59.137	Echinops_telfairi
ENSCHIG00000021295	GPATCH4	95	70.437	ENSEASG00005018284	GPATCH4	87	70.180	Equus_asinus_asinus
ENSCHIG00000021295	GPATCH4	95	70.437	ENSECAG00000011135	GPATCH4	97	74.487	Equus_caballus
ENSCHIG00000021295	GPATCH4	94	60.260	ENSEEUG00000003221	-	81	60.563	Erinaceus_europaeus
ENSCHIG00000021295	GPATCH4	71	75.427	ENSFCAG00000006554	GPATCH4	92	69.208	Felis_catus
ENSCHIG00000021295	GPATCH4	89	34.232	ENSFHEG00000003097	gpatch4	52	46.535	Fundulus_heteroclitus
ENSCHIG00000021295	GPATCH4	83	76.081	ENSGGOG00000000753	GPATCH4	92	79.259	Gorilla_gorilla
ENSCHIG00000021295	GPATCH4	56	40.496	ENSHBUG00000009675	gpatch4	58	53.000	Haplochromis_burtoni
ENSCHIG00000021295	GPATCH4	93	62.694	ENSSTOG00000020510	GPATCH4	89	86.325	Ictidomys_tridecemlineatus
ENSCHIG00000021295	GPATCH4	56	40.408	ENSLBEG00000009364	-	59	47.179	Labrus_bergylta
ENSCHIG00000021295	GPATCH4	87	61.732	ENSLAFG00000028327	-	91	56.608	Loxodonta_africana
ENSCHIG00000021295	GPATCH4	84	74.929	ENSMFAG00000030965	GPATCH4	98	77.857	Macaca_fascicularis
ENSCHIG00000021295	GPATCH4	95	72.727	ENSMMUG00000002624	GPATCH4	98	77.143	Macaca_mulatta
ENSCHIG00000021295	GPATCH4	89	70.699	ENSMNEG00000028844	GPATCH4	98	76.429	Macaca_nemestrina
ENSCHIG00000021295	GPATCH4	84	74.359	ENSMLEG00000037909	GPATCH4	92	78.519	Mandrillus_leucophaeus
ENSCHIG00000021295	GPATCH4	50	43.243	ENSMZEG00005017452	gpatch4	53	45.146	Maylandia_zebra
ENSCHIG00000021295	GPATCH4	87	73.204	ENSMICG00000013624	GPATCH4	96	73.757	Microcebus_murinus
ENSCHIG00000021295	GPATCH4	52	63.380	ENSMICG00000038615	-	92	66.667	Microcebus_murinus
ENSCHIG00000021295	GPATCH4	56	39.600	ENSMMOG00000017095	gpatch4	76	59.756	Mola_mola
ENSCHIG00000021295	GPATCH4	62	58.594	ENSMODG00000016818	-	69	63.590	Monodelphis_domestica
ENSCHIG00000021295	GPATCH4	87	64.146	MGP_CAROLIEiJ_G0025152	Gpatch4	82	82.051	Mus_caroli
ENSCHIG00000021295	GPATCH4	87	62.185	ENSMUSG00000028069	Gpatch4	78	82.353	Mus_musculus
ENSCHIG00000021295	GPATCH4	86	63.231	MGP_PahariEiJ_G0026595	-	82	82.564	Mus_pahari
ENSCHIG00000021295	GPATCH4	87	61.050	MGP_SPRETEiJ_G0026093	Gpatch4	78	82.888	Mus_spretus
ENSCHIG00000021295	GPATCH4	94	63.144	ENSMPUG00000004136	-	89	63.117	Mustela_putorius_furo
ENSCHIG00000021295	GPATCH4	95	70.180	ENSMLUG00000009571	GPATCH4	87	69.054	Myotis_lucifugus
ENSCHIG00000021295	GPATCH4	83	75.000	ENSNLEG00000027678	GPATCH4	92	75.000	Nomascus_leucogenys
ENSCHIG00000021295	GPATCH4	57	53.017	ENSMEUG00000006861	-	71	57.513	Notamacropus_eugenii
ENSCHIG00000021295	GPATCH4	100	57.743	ENSOPRG00000000586	GPATCH4	86	63.918	Ochotona_princeps
ENSCHIG00000021295	GPATCH4	95	66.240	ENSOGAG00000006698	-	91	68.939	Otolemur_garnettii
ENSCHIG00000021295	GPATCH4	100	98.030	ENSOARG00000006123	GPATCH4	100	98.030	Ovis_aries
ENSCHIG00000021295	GPATCH4	88	74.114	ENSPPAG00000028364	-	92	79.259	Pan_paniscus
ENSCHIG00000021295	GPATCH4	71	73.973	ENSPPRG00000002106	GPATCH4	92	67.435	Panthera_pardus
ENSCHIG00000021295	GPATCH4	73	73.244	ENSPTIG00000006717	GPATCH4	79	87.387	Panthera_tigris_altaica
ENSCHIG00000021295	GPATCH4	88	74.114	ENSPTRG00000001464	GPATCH4	92	79.259	Pan_troglodytes
ENSCHIG00000021295	GPATCH4	84	74.929	ENSPANG00000018543	GPATCH4	98	77.143	Papio_anubis
ENSCHIG00000021295	GPATCH4	59	47.791	ENSPSIG00000011317	GPATCH4	69	56.122	Pelodiscus_sinensis
ENSCHIG00000021295	GPATCH4	95	72.040	ENSPPYG00000000711	-	88	72.040	Pongo_abelii
ENSCHIG00000021295	GPATCH4	93	62.533	ENSPVAG00000007505	-	90	61.003	Pteropus_vampyrus
ENSCHIG00000021295	GPATCH4	71	36.393	ENSPNYG00000018461	gpatch4	52	45.588	Pundamilia_nyererei
ENSCHIG00000021295	GPATCH4	87	66.573	ENSRNOG00000018969	Gpatch4	86	66.852	Rattus_norvegicus
ENSCHIG00000021295	GPATCH4	71	78.983	ENSRBIG00000005742	GPATCH4	98	77.143	Rhinopithecus_bieti
ENSCHIG00000021295	GPATCH4	99	69.321	ENSRROG00000044157	GPATCH4	98	77.143	Rhinopithecus_roxellana
ENSCHIG00000021295	GPATCH4	95	69.849	ENSSBOG00000024840	GPATCH4	88	68.090	Saimiri_boliviensis_boliviensis
ENSCHIG00000021295	GPATCH4	55	58.952	ENSSHAG00000015436	-	70	62.245	Sarcophilus_harrisii
ENSCHIG00000021295	GPATCH4	78	52.681	ENSSARG00000008606	-	98	45.980	Sorex_araneus
ENSCHIG00000021295	GPATCH4	95	76.845	ENSSSCG00000006481	GPATCH4	88	73.537	Sus_scrofa
ENSCHIG00000021295	GPATCH4	94	72.021	ENSTTRG00000001113	GPATCH4	85	72.021	Tursiops_truncatus
ENSCHIG00000021295	GPATCH4	94	66.321	ENSUAMG00000013407	GPATCH4	89	65.810	Ursus_americanus
ENSCHIG00000021295	GPATCH4	94	65.803	ENSUMAG00000017797	GPATCH4	89	65.039	Ursus_maritimus
ENSCHIG00000021295	GPATCH4	94	57.794	ENSVVUG00000006004	-	88	79.832	Vulpes_vulpes
ENSCHIG00000021295	GPATCH4	55	38.800	ENSXCOG00000003911	gpatch4	53	43.719	Xiphophorus_couchianus
ENSCHIG00000021295	GPATCH4	52	37.860	ENSXMAG00000024520	gpatch4	53	43.842	Xiphophorus_maculatus