EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000021519 (Gene tree)
Gene ID: 102168584
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 28943 bases
Position: chr1:143308977-143337919
Accession: 102168584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000024253	Nop52	PF05997.12	1.8e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000032113	RRP1B-201	4828	XM_018051765	ENSCHIP00000024253	735 (aa)	XP_017907254	UPI000847546A

Gene Model

Click here to download ENSCHIG00000021519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000021519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000021519	RRP1B	100	68.997	ENSG00000160208	RRP1B	100	68.997	Homo_sapiens
ENSCHIG00000021519	RRP1B	66	50.781	ENSAPOG00000007490	-	53	49.045	Acanthochromis_polyacanthus
ENSCHIG00000021519	RRP1B	73	78.571	ENSAMEG00000011401	RRP1B	74	78.571	Ailuropoda_melanoleuca
ENSCHIG00000021519	RRP1B	59	56.000	ENSAOCG00000017894	-	95	56.566	Amphiprion_ocellaris
ENSCHIG00000021519	RRP1B	66	46.875	ENSAPEG00000024150	-	53	46.795	Amphiprion_percula
ENSCHIG00000021519	RRP1B	94	45.765	ENSAPLG00000004310	RRP1B	100	45.890	Anas_platyrhynchos
ENSCHIG00000021519	RRP1B	100	67.062	ENSANAG00000034889	RRP1B	100	67.105	Aotus_nancymaae
ENSCHIG00000021519	RRP1B	100	92.402	ENSBTAG00000017418	RRP1B	100	92.402	Bos_taurus
ENSCHIG00000021519	RRP1B	51	49.206	ENSCJAG00000043205	RRP1	76	49.206	Callithrix_jacchus
ENSCHIG00000021519	RRP1B	100	65.526	ENSCJAG00000017077	RRP1B	100	65.395	Callithrix_jacchus
ENSCHIG00000021519	RRP1B	94	66.527	ENSCAFG00000010621	RRP1B	99	66.573	Canis_familiaris
ENSCHIG00000021519	RRP1B	100	66.930	ENSCAFG00020018901	RRP1B	100	67.368	Canis_lupus_dingo
ENSCHIG00000021519	RRP1B	100	57.143	ENSCPOG00000002396	RRP1B	100	57.276	Cavia_porcellus
ENSCHIG00000021519	RRP1B	100	66.887	ENSCCAG00000029384	RRP1B	100	66.887	Cebus_capucinus
ENSCHIG00000021519	RRP1B	54	47.772	ENSCCAG00000029828	RRP1	77	49.863	Cebus_capucinus
ENSCHIG00000021519	RRP1B	100	67.810	ENSCATG00000017423	RRP1B	100	67.810	Cercocebus_atys
ENSCHIG00000021519	RRP1B	50	47.838	ENSCLAG00000011639	RRP1	80	47.838	Chinchilla_lanigera
ENSCHIG00000021519	RRP1B	100	57.412	ENSCLAG00000005622	RRP1B	100	58.154	Chinchilla_lanigera
ENSCHIG00000021519	RRP1B	100	67.942	ENSCSAG00000007961	RRP1B	100	67.942	Chlorocebus_sabaeus
ENSCHIG00000021519	RRP1B	54	60.804	ENSCHOG00000002426	-	65	60.804	Choloepus_hoffmanni
ENSCHIG00000021519	RRP1B	99	49.545	ENSCPBG00000010310	RRP1B	98	48.693	Chrysemys_picta_bellii
ENSCHIG00000021519	RRP1B	100	67.546	ENSCANG00000040952	RRP1B	100	67.546	Colobus_angolensis_palliatus
ENSCHIG00000021519	RRP1B	100	60.502	ENSCGRG00001023882	-	100	60.502	Cricetulus_griseus_chok1gshd
ENSCHIG00000021519	RRP1B	100	60.898	ENSCGRG00001010889	-	100	60.898	Cricetulus_griseus_chok1gshd
ENSCHIG00000021519	RRP1B	57	45.581	ENSCGRG00001011920	Rrp1	88	47.089	Cricetulus_griseus_chok1gshd
ENSCHIG00000021519	RRP1B	94	59.944	ENSCGRG00000001553	Rrp1b	97	59.860	Cricetulus_griseus_crigri
ENSCHIG00000021519	RRP1B	57	45.581	ENSCGRG00000008915	Rrp1	88	47.089	Cricetulus_griseus_crigri
ENSCHIG00000021519	RRP1B	61	51.485	ENSCSEG00000020711	-	80	48.276	Cynoglossus_semilaevis
ENSCHIG00000021519	RRP1B	63	44.311	ENSDARG00000103337	rrp1	70	40.816	Danio_rerio
ENSCHIG00000021519	RRP1B	100	63.325	ENSDNOG00000032774	RRP1B	100	63.816	Dasypus_novemcinctus
ENSCHIG00000021519	RRP1B	59	45.671	ENSDNOG00000019880	RRP1	83	49.740	Dasypus_novemcinctus
ENSCHIG00000021519	RRP1B	93	55.446	ENSDORG00000005496	Rrp1b	100	56.011	Dipodomys_ordii
ENSCHIG00000021519	RRP1B	92	86.905	ENSETEG00000019489	RRP1B	91	86.905	Echinops_telfairi
ENSCHIG00000021519	RRP1B	100	73.677	ENSEASG00005001687	RRP1B	100	73.677	Equus_asinus_asinus
ENSCHIG00000021519	RRP1B	54	48.241	ENSEASG00005001673	RRP1	85	49.091	Equus_asinus_asinus
ENSCHIG00000021519	RRP1B	54	47.030	ENSECAG00000015703	RRP1	85	49.091	Equus_caballus
ENSCHIG00000021519	RRP1B	100	73.810	ENSECAG00000018018	RRP1B	100	73.810	Equus_caballus
ENSCHIG00000021519	RRP1B	64	52.756	ENSELUG00000015885	-	89	46.201	Esox_lucius
ENSCHIG00000021519	RRP1B	56	47.805	ENSFCAG00000008434	RRP1	81	50.000	Felis_catus
ENSCHIG00000021519	RRP1B	100	69.746	ENSFCAG00000010272	RRP1B	100	69.880	Felis_catus
ENSCHIG00000021519	RRP1B	92	44.321	ENSFALG00000002024	RRP1B	100	43.333	Ficedula_albicollis
ENSCHIG00000021519	RRP1B	96	58.357	ENSFDAG00000010899	RRP1B	96	58.357	Fukomys_damarensis
ENSCHIG00000021519	RRP1B	55	46.552	ENSFDAG00000013728	RRP1	85	47.089	Fukomys_damarensis
ENSCHIG00000021519	RRP1B	65	43.382	ENSFHEG00000016314	-	55	44.514	Fundulus_heteroclitus
ENSCHIG00000021519	RRP1B	62	48.598	ENSGMOG00000001953	-	69	48.598	Gadus_morhua
ENSCHIG00000021519	RRP1B	100	46.244	ENSGALG00000035696	RRP1B	100	45.325	Gallus_gallus
ENSCHIG00000021519	RRP1B	65	48.819	ENSGACG00000001438	rrp1	71	48.819	Gasterosteus_aculeatus
ENSCHIG00000021519	RRP1B	100	69.393	ENSGGOG00000012069	RRP1B	100	69.393	Gorilla_gorilla
ENSCHIG00000021519	RRP1B	99	57.067	ENSHGLG00000004968	RRP1B	100	58.411	Heterocephalus_glaber_female
ENSCHIG00000021519	RRP1B	75	64.890	ENSHGLG00100002232	RRP1B	78	62.611	Heterocephalus_glaber_male
ENSCHIG00000021519	RRP1B	67	43.919	ENSHCOG00000018388	-	62	43.919	Hippocampus_comes
ENSCHIG00000021519	RRP1B	59	50.000	ENSIPUG00000000673	-	73	42.969	Ictalurus_punctatus
ENSCHIG00000021519	RRP1B	57	46.838	ENSSTOG00000011116	RRP1	75	53.754	Ictidomys_tridecemlineatus
ENSCHIG00000021519	RRP1B	99	62.083	ENSSTOG00000011790	RRP1B	96	63.026	Ictidomys_tridecemlineatus
ENSCHIG00000021519	RRP1B	100	55.731	ENSJJAG00000021279	Rrp1b	100	54.737	Jaculus_jaculus
ENSCHIG00000021519	RRP1B	62	49.206	ENSKMAG00000005539	rrp1	55	44.086	Kryptolebias_marmoratus
ENSCHIG00000021519	RRP1B	66	52.846	ENSLACG00000017332	-	66	52.846	Latimeria_chalumnae
ENSCHIG00000021519	RRP1B	65	53.125	ENSLOCG00000004064	-	69	53.383	Lepisosteus_oculatus
ENSCHIG00000021519	RRP1B	88	59.792	ENSLAFG00000000766	RRP1B	95	68.493	Loxodonta_africana
ENSCHIG00000021519	RRP1B	53	48.259	ENSLAFG00000022901	RRP1	85	49.610	Loxodonta_africana
ENSCHIG00000021519	RRP1B	100	67.810	ENSMFAG00000039152	RRP1B	100	67.810	Macaca_fascicularis
ENSCHIG00000021519	RRP1B	100	65.786	ENSMMUG00000000104	RRP1B	100	65.786	Macaca_mulatta
ENSCHIG00000021519	RRP1B	100	67.678	ENSMNEG00000034269	RRP1B	100	67.678	Macaca_nemestrina
ENSCHIG00000021519	RRP1B	100	64.258	ENSMLEG00000040044	RRP1B	99	66.573	Mandrillus_leucophaeus
ENSCHIG00000021519	RRP1B	100	46.701	ENSMGAG00000014591	RRP1B	100	47.036	Meleagris_gallopavo
ENSCHIG00000021519	RRP1B	100	59.445	ENSMAUG00000021508	Rrp1b	100	59.313	Mesocricetus_auratus
ENSCHIG00000021519	RRP1B	100	69.129	ENSMICG00000004686	RRP1B	100	68.997	Microcebus_murinus
ENSCHIG00000021519	RRP1B	100	57.520	ENSMOCG00000001117	Rrp1b	100	57.992	Microtus_ochrogaster
ENSCHIG00000021519	RRP1B	100	61.749	ENSMODG00000021033	RRP1B	100	62.060	Monodelphis_domestica
ENSCHIG00000021519	RRP1B	51	44.800	ENSMALG00000010310	rrp1	96	44.800	Monopterus_albus
ENSCHIG00000021519	RRP1B	54	53.750	MGP_CAROLIEiJ_G0015508	Rrp1	94	41.753	Mus_caroli
ENSCHIG00000021519	RRP1B	100	57.580	MGP_CAROLIEiJ_G0021376	Rrp1b	100	57.447	Mus_caroli
ENSCHIG00000021519	RRP1B	54	53.750	ENSMUSG00000061032	Rrp1	94	41.495	Mus_musculus
ENSCHIG00000021519	RRP1B	100	56.821	ENSMUSG00000058392	Rrp1b	100	56.954	Mus_musculus
ENSCHIG00000021519	RRP1B	54	54.393	MGP_PahariEiJ_G0030921	Rrp1	87	48.161	Mus_pahari
ENSCHIG00000021519	RRP1B	100	56.574	MGP_PahariEiJ_G0023695	Rrp1b	100	58.112	Mus_pahari
ENSCHIG00000021519	RRP1B	54	53.750	MGP_SPRETEiJ_G0016321	Rrp1	79	41.495	Mus_spretus
ENSCHIG00000021519	RRP1B	100	56.821	MGP_SPRETEiJ_G0022290	Rrp1b	100	56.954	Mus_spretus
ENSCHIG00000021519	RRP1B	83	62.205	ENSMPUG00000009810	RRP1B	99	62.362	Mustela_putorius_furo
ENSCHIG00000021519	RRP1B	99	72.346	ENSMLUG00000007738	RRP1B	99	72.346	Myotis_lucifugus
ENSCHIG00000021519	RRP1B	100	58.453	ENSNGAG00000021073	Rrp1b	100	59.367	Nannospalax_galili
ENSCHIG00000021519	RRP1B	100	67.202	ENSNLEG00000001490	RRP1B	100	67.202	Nomascus_leucogenys
ENSCHIG00000021519	RRP1B	69	84.874	ENSMEUG00000003226	-	75	85.714	Notamacropus_eugenii
ENSCHIG00000021519	RRP1B	100	56.032	ENSODEG00000013177	RRP1B	100	56.032	Octodon_degus
ENSCHIG00000021519	RRP1B	99	52.590	ENSOANG00000006470	RRP1B	99	52.163	Ornithorhynchus_anatinus
ENSCHIG00000021519	RRP1B	94	54.031	ENSOCUG00000025931	RRP1B	100	53.780	Oryctolagus_cuniculus
ENSCHIG00000021519	RRP1B	61	52.874	ENSORLG00020007199	-	55	52.874	Oryzias_latipes_hni
ENSCHIG00000021519	RRP1B	68	44.772	ENSORLG00015004425	-	56	46.825	Oryzias_latipes_hsok
ENSCHIG00000021519	RRP1B	61	55.556	ENSOMEG00000016910	-	56	55.556	Oryzias_melastigma
ENSCHIG00000021519	RRP1B	51	47.938	ENSOGAG00000006105	RRP1	83	50.000	Otolemur_garnettii
ENSCHIG00000021519	RRP1B	98	60.000	ENSOGAG00000009872	RRP1B	83	74.468	Otolemur_garnettii
ENSCHIG00000021519	RRP1B	60	43.750	ENSOARG00000011434	RRP1	74	52.395	Ovis_aries
ENSCHIG00000021519	RRP1B	94	97.547	ENSOARG00000011314	RRP1B	100	97.547	Ovis_aries
ENSCHIG00000021519	RRP1B	94	67.413	ENSPPAG00000035319	RRP1B	99	67.318	Pan_paniscus
ENSCHIG00000021519	RRP1B	50	49.865	ENSPPRG00000010656	RRP1	81	49.865	Panthera_pardus
ENSCHIG00000021519	RRP1B	100	68.583	ENSPPRG00000010356	RRP1B	100	68.717	Panthera_pardus
ENSCHIG00000021519	RRP1B	73	75.912	ENSPTIG00000016894	RRP1B	89	76.642	Panthera_tigris_altaica
ENSCHIG00000021519	RRP1B	100	68.997	ENSPTRG00000013958	RRP1B	100	68.997	Pan_troglodytes
ENSCHIG00000021519	RRP1B	100	68.074	ENSPANG00000011090	RRP1B	100	68.074	Papio_anubis
ENSCHIG00000021519	RRP1B	81	51.471	ENSPKIG00000003422	-	61	51.471	Paramormyrops_kingsleyae
ENSCHIG00000021519	RRP1B	100	59.868	ENSPEMG00000022490	Rrp1b	100	60.186	Peromyscus_maniculatus_bairdii
ENSCHIG00000021519	RRP1B	100	61.599	ENSPCIG00000015513	RRP1B	100	60.944	Phascolarctos_cinereus
ENSCHIG00000021519	RRP1B	57	41.943	ENSPFOG00000007424	-	51	42.893	Poecilia_formosa
ENSCHIG00000021519	RRP1B	64	46.923	ENSPMEG00000007042	-	57	46.923	Poecilia_mexicana
ENSCHIG00000021519	RRP1B	73	47.656	ENSPREG00000015673	-	58	47.656	Poecilia_reticulata
ENSCHIG00000021519	RRP1B	100	68.470	ENSPPYG00000011470	RRP1B	100	68.470	Pongo_abelii
ENSCHIG00000021519	RRP1B	85	87.368	ENSPCAG00000013723	RRP1B	91	87.368	Procavia_capensis
ENSCHIG00000021519	RRP1B	100	68.344	ENSPCOG00000017927	RRP1B	100	68.575	Propithecus_coquereli
ENSCHIG00000021519	RRP1B	99	63.408	ENSPVAG00000001436	RRP1B	99	64.550	Pteropus_vampyrus
ENSCHIG00000021519	RRP1B	100	59.787	ENSRNOG00000001194	Rrp1b	100	59.787	Rattus_norvegicus
ENSCHIG00000021519	RRP1B	100	64.380	ENSRBIG00000041689	RRP1B	100	64.380	Rhinopithecus_bieti
ENSCHIG00000021519	RRP1B	100	68.206	ENSRROG00000031499	RRP1B	100	68.206	Rhinopithecus_roxellana
ENSCHIG00000021519	RRP1B	51	49.337	ENSSBOG00000034689	RRP1	81	49.337	Saimiri_boliviensis_boliviensis
ENSCHIG00000021519	RRP1B	94	62.938	ENSSBOG00000034727	RRP1B	99	62.938	Saimiri_boliviensis_boliviensis
ENSCHIG00000021519	RRP1B	100	61.961	ENSSHAG00000017789	RRP1B	100	60.784	Sarcophilus_harrisii
ENSCHIG00000021519	RRP1B	60	50.000	ENSSFOG00015003932	-	57	50.847	Scleropages_formosus
ENSCHIG00000021519	RRP1B	66	49.219	ENSSMAG00000016847	-	88	44.652	Scophthalmus_maximus
ENSCHIG00000021519	RRP1B	67	48.837	ENSSDUG00000000551	-	55	48.837	Seriola_dumerili
ENSCHIG00000021519	RRP1B	67	48.837	ENSSLDG00000002538	-	55	48.837	Seriola_lalandi_dorsalis
ENSCHIG00000021519	RRP1B	76	67.368	ENSSARG00000003108	-	75	67.368	Sorex_araneus
ENSCHIG00000021519	RRP1B	64	50.000	ENSSPAG00000005370	-	51	50.000	Stegastes_partitus
ENSCHIG00000021519	RRP1B	100	65.638	ENSSSCG00000021698	RRP1B	100	66.846	Sus_scrofa
ENSCHIG00000021519	RRP1B	94	45.144	ENSTGUG00000005926	RRP1B	100	44.890	Taeniopygia_guttata
ENSCHIG00000021519	RRP1B	68	48.276	ENSTNIG00000005053	rrp1	69	48.276	Tetraodon_nigroviridis
ENSCHIG00000021519	RRP1B	94	62.179	ENSTBEG00000000422	RRP1B	100	67.822	Tupaia_belangeri
ENSCHIG00000021519	RRP1B	100	73.620	ENSTTRG00000000723	RRP1B	100	73.890	Tursiops_truncatus
ENSCHIG00000021519	RRP1B	100	67.930	ENSUAMG00000026765	RRP1B	100	67.027	Ursus_americanus
ENSCHIG00000021519	RRP1B	67	76.923	ENSUMAG00000025510	RRP1B	92	79.200	Ursus_maritimus
ENSCHIG00000021519	RRP1B	94	66.434	ENSVVUG00000024509	RRP1B	99	66.480	Vulpes_vulpes
ENSCHIG00000021519	RRP1B	59	49.057	ENSXETG00000013683	rrp1b	84	49.057	Xenopus_tropicalis
ENSCHIG00000021519	RRP1B	70	45.865	ENSXMAG00000023123	-	58	45.865	Xiphophorus_maculatus