EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000021910 (Gene tree)
Gene ID: 102189595
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 1329 bases
Position: chr12:54401617-54402945
Accession: 102189595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000024920	RNA_pol_L_2	PF13656.6	5.2e-28	1	1
ENSCHIP00000024920	RNA_pol_L	PF01193.24	9.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000032781	POLR1D-201	402	XM_018056591	ENSCHIP00000024920	133 (aa)	XP_017912080	UPI0005FAF342

Gene Model

Click here to download ENSCHIG00000021910's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03020	RNA polymerase	KEGG
chx04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000021910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000021910	POLR1D	77	33.010	ENSCHIG00000009008	-	85	33.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000021910	POLR1D	100	95.489	ENSG00000186184	POLR1D	100	96.552	Homo_sapiens
ENSCHIG00000021910	POLR1D	83	66.667	ENSAPOG00000021882	polr1d	98	66.667	Acanthochromis_polyacanthus
ENSCHIG00000021910	POLR1D	94	96.800	ENSAMEG00000019095	POLR1D	100	96.800	Ailuropoda_melanoleuca
ENSCHIG00000021910	POLR1D	80	71.296	ENSACIG00000013328	polr1d	94	71.296	Amphilophus_citrinellus
ENSCHIG00000021910	POLR1D	84	66.071	ENSAOCG00000018500	polr1d	98	66.071	Amphiprion_ocellaris
ENSCHIG00000021910	POLR1D	79	68.571	ENSAPEG00000009489	polr1d	92	68.571	Amphiprion_percula
ENSCHIG00000021910	POLR1D	80	67.290	ENSATEG00000019322	polr1d	94	67.290	Anabas_testudineus
ENSCHIG00000021910	POLR1D	83	66.667	ENSACAG00000015753	POLR1D	96	66.667	Anolis_carolinensis
ENSCHIG00000021910	POLR1D	100	96.241	ENSANAG00000024486	POLR1D	100	96.241	Aotus_nancymaae
ENSCHIG00000021910	POLR1D	80	71.028	ENSACLG00000023805	polr1d	94	71.028	Astatotilapia_calliptera
ENSCHIG00000021910	POLR1D	80	68.868	ENSAMXG00000036118	polr1d	92	68.868	Astyanax_mexicanus
ENSCHIG00000021910	POLR1D	100	98.496	ENSBTAG00000008642	POLR1D	100	98.496	Bos_taurus
ENSCHIG00000021910	POLR1D	100	98.496	ENSBTAG00000033252	-	100	98.496	Bos_taurus
ENSCHIG00000021910	POLR1D	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSCHIG00000021910	POLR1D	100	95.489	ENSCJAG00000044669	POLR1D	100	95.489	Callithrix_jacchus
ENSCHIG00000021910	POLR1D	100	96.992	ENSCAFG00000006755	POLR1D	100	96.992	Canis_familiaris
ENSCHIG00000021910	POLR1D	96	80.769	ENSTSYG00000034852	-	98	81.513	Carlito_syrichta
ENSCHIG00000021910	POLR1D	93	92.742	ENSTSYG00000026817	-	93	92.742	Carlito_syrichta
ENSCHIG00000021910	POLR1D	96	52.344	ENSCAPG00000006058	-	99	52.344	Cavia_aperea
ENSCHIG00000021910	POLR1D	96	54.688	ENSCPOG00000030450	-	99	54.688	Cavia_porcellus
ENSCHIG00000021910	POLR1D	100	77.444	ENSCCAG00000020191	-	100	77.444	Cebus_capucinus
ENSCHIG00000021910	POLR1D	100	94.737	ENSCCAG00000021349	-	100	94.737	Cebus_capucinus
ENSCHIG00000021910	POLR1D	100	83.459	ENSCATG00000022900	-	100	83.459	Cercocebus_atys
ENSCHIG00000021910	POLR1D	100	93.985	ENSCATG00000030710	-	100	93.985	Cercocebus_atys
ENSCHIG00000021910	POLR1D	93	94.355	ENSCLAG00000017623	POLR1D	100	94.355	Chinchilla_lanigera
ENSCHIG00000021910	POLR1D	73	79.381	ENSCPBG00000004719	POLR1D	96	79.381	Chrysemys_picta_bellii
ENSCHIG00000021910	POLR1D	100	93.985	ENSCANG00000028632	-	100	93.985	Colobus_angolensis_palliatus
ENSCHIG00000021910	POLR1D	100	90.977	ENSCANG00000037694	-	100	90.977	Colobus_angolensis_palliatus
ENSCHIG00000021910	POLR1D	100	94.737	ENSCGRG00001021251	Polr1d	100	94.737	Cricetulus_griseus_chok1gshd
ENSCHIG00000021910	POLR1D	100	94.737	ENSCGRG00000011639	Polr1d	100	94.737	Cricetulus_griseus_crigri
ENSCHIG00000021910	POLR1D	78	70.192	ENSCSEG00000018268	polr1d	91	69.159	Cynoglossus_semilaevis
ENSCHIG00000021910	POLR1D	79	72.381	ENSCVAG00000018527	polr1d	92	72.381	Cyprinodon_variegatus
ENSCHIG00000021910	POLR1D	83	66.364	ENSDARG00000037570	polr1d	98	66.364	Danio_rerio
ENSCHIG00000021910	POLR1D	100	90.299	ENSDNOG00000046247	-	100	90.299	Dasypus_novemcinctus
ENSCHIG00000021910	POLR1D	100	92.481	ENSDNOG00000043676	-	100	92.481	Dasypus_novemcinctus
ENSCHIG00000021910	POLR1D	100	93.985	ENSDORG00000029155	Polr1d	100	93.985	Dipodomys_ordii
ENSCHIG00000021910	POLR1D	65	44.186	FBgn0086447	l(2)37Cg	81	44.186	Drosophila_melanogaster
ENSCHIG00000021910	POLR1D	93	88.710	ENSETEG00000012797	POLR1D	100	88.710	Echinops_telfairi
ENSCHIG00000021910	POLR1D	65	71.264	ENSEBUG00000011748	polr1d	61	71.264	Eptatretus_burgeri
ENSCHIG00000021910	POLR1D	96	95.312	ENSEASG00005022487	POLR1D	99	95.312	Equus_asinus_asinus
ENSCHIG00000021910	POLR1D	93	96.774	ENSEEUG00000013144	POLR1D	100	96.774	Erinaceus_europaeus
ENSCHIG00000021910	POLR1D	80	70.755	ENSELUG00000005105	rpac2	93	70.755	Esox_lucius
ENSCHIG00000021910	POLR1D	100	95.489	ENSFCAG00000030162	POLR1D	100	95.489	Felis_catus
ENSCHIG00000021910	POLR1D	72	77.083	ENSFALG00000011463	POLR1D	95	77.083	Ficedula_albicollis
ENSCHIG00000021910	POLR1D	100	93.233	ENSFDAG00000004463	POLR1D	100	93.233	Fukomys_damarensis
ENSCHIG00000021910	POLR1D	80	74.074	ENSFHEG00000015410	polr1d	94	74.074	Fundulus_heteroclitus
ENSCHIG00000021910	POLR1D	83	68.750	ENSGAFG00000001693	polr1d	92	72.381	Gambusia_affinis
ENSCHIG00000021910	POLR1D	88	67.797	ENSGACG00000018585	polr1d	100	67.797	Gasterosteus_aculeatus
ENSCHIG00000021910	POLR1D	80	80.189	ENSGAGG00000008503	POLR1D	93	80.189	Gopherus_agassizii
ENSCHIG00000021910	POLR1D	100	95.489	ENSGGOG00000004235	POLR1D	100	95.489	Gorilla_gorilla
ENSCHIG00000021910	POLR1D	80	71.028	ENSHBUG00000002111	polr1d	94	71.028	Haplochromis_burtoni
ENSCHIG00000021910	POLR1D	100	93.233	ENSHGLG00000003202	POLR1D	100	93.233	Heterocephalus_glaber_female
ENSCHIG00000021910	POLR1D	100	93.233	ENSHGLG00100009393	POLR1D	100	93.233	Heterocephalus_glaber_male
ENSCHIG00000021910	POLR1D	80	69.159	ENSHCOG00000003258	polr1d	94	69.159	Hippocampus_comes
ENSCHIG00000021910	POLR1D	87	67.241	ENSIPUG00000014810	polr1d	97	67.241	Ictalurus_punctatus
ENSCHIG00000021910	POLR1D	100	96.241	ENSSTOG00000013877	POLR1D	100	96.241	Ictidomys_tridecemlineatus
ENSCHIG00000021910	POLR1D	97	87.970	ENSJJAG00000022671	-	100	91.667	Jaculus_jaculus
ENSCHIG00000021910	POLR1D	95	73.810	ENSJJAG00000021667	-	75	73.810	Jaculus_jaculus
ENSCHIG00000021910	POLR1D	80	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSCHIG00000021910	POLR1D	79	72.381	ENSLBEG00000015919	polr1d	92	72.381	Labrus_bergylta
ENSCHIG00000021910	POLR1D	87	65.517	ENSLACG00000006810	POLR1D	96	65.517	Latimeria_chalumnae
ENSCHIG00000021910	POLR1D	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSCHIG00000021910	POLR1D	100	87.970	ENSLAFG00000032290	POLR1D	100	87.970	Loxodonta_africana
ENSCHIG00000021910	POLR1D	94	93.600	ENSMFAG00000045264	POLR1D	97	93.600	Macaca_fascicularis
ENSCHIG00000021910	POLR1D	100	75.188	ENSMMUG00000041570	-	100	75.188	Macaca_mulatta
ENSCHIG00000021910	POLR1D	87	95.690	ENSMMUG00000020386	POLR1D	100	95.690	Macaca_mulatta
ENSCHIG00000021910	POLR1D	100	78.195	ENSMNEG00000038120	-	100	78.195	Macaca_nemestrina
ENSCHIG00000021910	POLR1D	100	94.737	ENSMNEG00000008630	-	100	94.737	Macaca_nemestrina
ENSCHIG00000021910	POLR1D	100	84.211	ENSMLEG00000032251	-	100	84.211	Mandrillus_leucophaeus
ENSCHIG00000021910	POLR1D	100	94.737	ENSMLEG00000041048	-	100	94.737	Mandrillus_leucophaeus
ENSCHIG00000021910	POLR1D	76	70.297	ENSMAMG00000014834	polr1d	94	70.297	Mastacembelus_armatus
ENSCHIG00000021910	POLR1D	75	74.000	ENSMZEG00005006638	polr1d	88	74.000	Maylandia_zebra
ENSCHIG00000021910	POLR1D	80	68.807	ENSMGAG00000005322	POLR1D	100	68.807	Meleagris_gallopavo
ENSCHIG00000021910	POLR1D	100	94.737	ENSMAUG00000001946	Polr1d	100	94.737	Mesocricetus_auratus
ENSCHIG00000021910	POLR1D	99	78.030	ENSMICG00000007349	-	100	78.030	Microcebus_murinus
ENSCHIG00000021910	POLR1D	100	95.489	ENSMICG00000016883	-	100	95.489	Microcebus_murinus
ENSCHIG00000021910	POLR1D	99	92.424	ENSMOCG00000021288	Polr1d	99	92.424	Microtus_ochrogaster
ENSCHIG00000021910	POLR1D	80	68.224	ENSMMOG00000009605	polr1d	94	68.224	Mola_mola
ENSCHIG00000021910	POLR1D	80	83.962	ENSMODG00000023881	POLR1D	93	83.962	Monodelphis_domestica
ENSCHIG00000021910	POLR1D	80	67.290	ENSMALG00000010652	polr1d	94	67.290	Monopterus_albus
ENSCHIG00000021910	POLR1D	100	87.970	MGP_CAROLIEiJ_G0028034	Polr1d	100	87.970	Mus_caroli
ENSCHIG00000021910	POLR1D	100	87.970	ENSMUSG00000029642	Polr1d	100	87.970	Mus_musculus
ENSCHIG00000021910	POLR1D	100	87.218	MGP_PahariEiJ_G0024600	Polr1d	100	87.218	Mus_pahari
ENSCHIG00000021910	POLR1D	100	88.722	MGP_SPRETEiJ_G0029032	Polr1d	100	88.722	Mus_spretus
ENSCHIG00000021910	POLR1D	99	85.606	ENSMLUG00000004118	-	99	85.606	Myotis_lucifugus
ENSCHIG00000021910	POLR1D	100	96.241	ENSMLUG00000027169	-	100	96.241	Myotis_lucifugus
ENSCHIG00000021910	POLR1D	87	95.690	ENSNGAG00000006014	Polr1d	100	95.690	Nannospalax_galili
ENSCHIG00000021910	POLR1D	80	71.028	ENSNBRG00000020327	polr1d	94	71.028	Neolamprologus_brichardi
ENSCHIG00000021910	POLR1D	100	95.489	ENSNLEG00000000358	POLR1D	100	95.489	Nomascus_leucogenys
ENSCHIG00000021910	POLR1D	100	78.947	ENSODEG00000014801	-	100	78.947	Octodon_degus
ENSCHIG00000021910	POLR1D	100	93.233	ENSODEG00000005294	-	100	93.233	Octodon_degus
ENSCHIG00000021910	POLR1D	79	81.905	ENSOANG00000008708	-	97	81.905	Ornithorhynchus_anatinus
ENSCHIG00000021910	POLR1D	100	95.489	ENSOCUG00000015706	POLR1D	82	95.489	Oryctolagus_cuniculus
ENSCHIG00000021910	POLR1D	80	69.811	ENSORLG00000010257	polr1d	93	69.811	Oryzias_latipes
ENSCHIG00000021910	POLR1D	83	67.568	ENSORLG00020000533	polr1d	75	67.568	Oryzias_latipes_hni
ENSCHIG00000021910	POLR1D	85	68.142	ENSORLG00015013267	polr1d	75	68.142	Oryzias_latipes_hsok
ENSCHIG00000021910	POLR1D	86	67.826	ENSOMEG00000014912	polr1d	77	67.826	Oryzias_melastigma
ENSCHIG00000021910	POLR1D	100	93.985	ENSOGAG00000014601	POLR1D	100	93.985	Otolemur_garnettii
ENSCHIG00000021910	POLR1D	94	100.000	ENSOARG00000017005	POLR1D	96	100.000	Ovis_aries
ENSCHIG00000021910	POLR1D	100	94.737	ENSPPAG00000028138	POLR1D	100	94.737	Pan_paniscus
ENSCHIG00000021910	POLR1D	99	95.455	ENSPPRG00000003381	POLR1D	99	95.455	Panthera_pardus
ENSCHIG00000021910	POLR1D	93	95.161	ENSPTIG00000018137	POLR1D	93	95.161	Panthera_tigris_altaica
ENSCHIG00000021910	POLR1D	100	95.489	ENSPTRG00000005734	POLR1D	100	95.489	Pan_troglodytes
ENSCHIG00000021910	POLR1D	100	94.737	ENSPANG00000020259	-	100	94.737	Papio_anubis
ENSCHIG00000021910	POLR1D	100	83.459	ENSPANG00000035051	-	100	83.459	Papio_anubis
ENSCHIG00000021910	POLR1D	86	60.870	ENSPKIG00000021891	polr1d	90	51.327	Paramormyrops_kingsleyae
ENSCHIG00000021910	POLR1D	87	74.359	ENSPSIG00000011822	POLR1D	91	74.359	Pelodiscus_sinensis
ENSCHIG00000021910	POLR1D	93	58.400	ENSPMGG00000012998	POLR1D	93	58.400	Periophthalmus_magnuspinnatus
ENSCHIG00000021910	POLR1D	84	67.857	ENSPMGG00000010359	polr1d	97	67.857	Periophthalmus_magnuspinnatus
ENSCHIG00000021910	POLR1D	100	89.474	ENSPEMG00000006336	-	100	89.474	Peromyscus_maniculatus_bairdii
ENSCHIG00000021910	POLR1D	82	59.633	ENSPMAG00000004228	polr1d	92	59.633	Petromyzon_marinus
ENSCHIG00000021910	POLR1D	80	83.962	ENSPCIG00000001673	POLR1D	93	83.962	Phascolarctos_cinereus
ENSCHIG00000021910	POLR1D	79	72.381	ENSPFOG00000023343	polr1d	92	73.750	Poecilia_formosa
ENSCHIG00000021910	POLR1D	79	72.381	ENSPLAG00000009675	polr1d	92	72.381	Poecilia_latipinna
ENSCHIG00000021910	POLR1D	79	72.381	ENSPMEG00000004628	polr1d	92	72.381	Poecilia_mexicana
ENSCHIG00000021910	POLR1D	79	72.381	ENSPREG00000022032	polr1d	92	72.381	Poecilia_reticulata
ENSCHIG00000021910	POLR1D	100	95.489	ENSPCOG00000028175	POLR1D	100	95.489	Propithecus_coquereli
ENSCHIG00000021910	POLR1D	80	71.028	ENSPNYG00000000107	polr1d	94	71.028	Pundamilia_nyererei
ENSCHIG00000021910	POLR1D	76	68.317	ENSPNAG00000001512	polr1d	87	67.308	Pygocentrus_nattereri
ENSCHIG00000021910	POLR1D	100	94.737	ENSRBIG00000036378	-	100	94.737	Rhinopithecus_bieti
ENSCHIG00000021910	POLR1D	100	90.977	ENSRBIG00000000336	-	100	90.977	Rhinopithecus_bieti
ENSCHIG00000021910	POLR1D	100	91.729	ENSRROG00000026751	-	100	91.729	Rhinopithecus_roxellana
ENSCHIG00000021910	POLR1D	100	94.737	ENSRROG00000042232	-	100	94.737	Rhinopithecus_roxellana
ENSCHIG00000021910	POLR1D	89	46.218	YNL113W	RPC19	84	46.218	Saccharomyces_cerevisiae
ENSCHIG00000021910	POLR1D	86	90.351	ENSSBOG00000030146	-	84	90.351	Saimiri_boliviensis_boliviensis
ENSCHIG00000021910	POLR1D	100	96.241	ENSSBOG00000028482	-	100	96.241	Saimiri_boliviensis_boliviensis
ENSCHIG00000021910	POLR1D	86	77.193	ENSSHAG00000001190	POLR1D	88	77.193	Sarcophilus_harrisii
ENSCHIG00000021910	POLR1D	82	73.394	ENSSFOG00015011375	polr1d	96	73.394	Scleropages_formosus
ENSCHIG00000021910	POLR1D	80	68.224	ENSSMAG00000011861	polr1d	94	68.224	Scophthalmus_maximus
ENSCHIG00000021910	POLR1D	80	67.290	ENSSDUG00000011930	polr1d	94	67.290	Seriola_dumerili
ENSCHIG00000021910	POLR1D	86	62.609	ENSSLDG00000023871	polr1d	97	62.609	Seriola_lalandi_dorsalis
ENSCHIG00000021910	POLR1D	100	95.489	ENSSARG00000007840	POLR1D	100	95.489	Sorex_araneus
ENSCHIG00000021910	POLR1D	79	76.190	ENSSPUG00000005786	POLR1D	95	72.973	Sphenodon_punctatus
ENSCHIG00000021910	POLR1D	79	71.429	ENSSPAG00000011764	polr1d	92	71.429	Stegastes_partitus
ENSCHIG00000021910	POLR1D	100	93.985	ENSSSCG00000009310	POLR1D	100	93.985	Sus_scrofa
ENSCHIG00000021910	POLR1D	72	77.083	ENSTGUG00000005450	POLR1D	100	77.083	Taeniopygia_guttata
ENSCHIG00000021910	POLR1D	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSCHIG00000021910	POLR1D	93	93.548	ENSTBEG00000007006	POLR1D	100	93.548	Tupaia_belangeri
ENSCHIG00000021910	POLR1D	100	96.992	ENSUAMG00000011413	POLR1D	100	96.992	Ursus_americanus
ENSCHIG00000021910	POLR1D	93	96.774	ENSUMAG00000016968	POLR1D	97	96.774	Ursus_maritimus
ENSCHIG00000021910	POLR1D	100	96.992	ENSVVUG00000009216	POLR1D	100	96.992	Vulpes_vulpes
ENSCHIG00000021910	POLR1D	74	74.490	ENSXCOG00000011731	polr1d	75	74.490	Xiphophorus_couchianus
ENSCHIG00000021910	POLR1D	74	74.490	ENSXMAG00000017538	polr1d	75	74.490	Xiphophorus_maculatus