EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000022096 (Gene tree)
Gene ID: 102176083
Gene Symbol: SRSF4
Alias: SFRS4|SRP75
Full Name: serine and arginine rich splicing factor 4
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 26128 bases
Position: chr2:11572124-11598251
Accession: 102176083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000025302	RRM_1	PF00076.22	1.9e-31	1	2
ENSCHIP00000025302	RRM_1	PF00076.22	1.9e-31	2	2
ENSCHIP00000025294	RRM_1	PF00076.22	2.9e-31	1	2
ENSCHIP00000025294	RRM_1	PF00076.22	2.9e-31	2	2
ENSCHIP00000025288	RRM_1	PF00076.22	3e-31	1	2
ENSCHIP00000025288	RRM_1	PF00076.22	3e-31	2	2
ENSCHIP00000025280	RRM_1	PF00076.22	3.7e-31	1	2
ENSCHIP00000025280	RRM_1	PF00076.22	3.7e-31	2	2
ENSCHIP00000025309	RRM_1	PF00076.22	5.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000033172	SRSF4-205	462	-	ENSCHIP00000025309	153 (aa)	-	UPI000D18E6E4
ENSCHIT00000033141	SRSF4-201	2849	XM_018057177	ENSCHIP00000025280	517 (aa)	XP_017912666	UPI0008463569
ENSCHIT00000033150	SRSF4-202	1446	XM_018057187	ENSCHIP00000025288	481 (aa)	XP_017912676	UPI000D190C62
ENSCHIT00000033156	SRSF4-203	1419	-	ENSCHIP00000025294	472 (aa)	-	UPI000D1933D7
ENSCHIT00000033164	SRSF4-204	1218	-	ENSCHIP00000025302	405 (aa)	-	UPI000D18D06F

Gene Model

Click here to download ENSCHIG00000022096's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG
chx05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000022096's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000022096	SRSF4	99	86.275	ENSG00000116350	SRSF4	95	86.275	Homo_sapiens
ENSCHIG00000022096	SRSF4	72	59.468	ENSAPOG00000020244	srsf4	67	73.016	Acanthochromis_polyacanthus
ENSCHIG00000022096	SRSF4	93	81.526	ENSAMEG00000000594	SRSF4	67	100.000	Ailuropoda_melanoleuca
ENSCHIG00000022096	SRSF4	63	70.428	ENSACIG00000018649	srsf4	90	85.950	Amphilophus_citrinellus
ENSCHIG00000022096	SRSF4	80	97.887	ENSAPLG00000006595	-	58	83.984	Anas_platyrhynchos
ENSCHIG00000022096	SRSF4	99	87.582	ENSANAG00000037134	SRSF4	95	87.582	Aotus_nancymaae
ENSCHIG00000022096	SRSF4	68	63.669	ENSAMXG00000034811	srsf4	81	80.723	Astyanax_mexicanus
ENSCHIG00000022096	SRSF4	93	91.942	ENSBTAG00000013309	SRSF4	100	92.734	Bos_taurus
ENSCHIG00000022096	SRSF4	99	87.582	ENSCJAG00000047192	SRSF4	95	87.582	Callithrix_jacchus
ENSCHIG00000022096	SRSF4	86	79.249	ENSCAFG00000011669	SRSF4	90	81.210	Canis_familiaris
ENSCHIG00000022096	SRSF4	86	82.705	ENSCAFG00020023963	SRSF4	88	82.276	Canis_lupus_dingo
ENSCHIG00000022096	SRSF4	99	82.353	ENSTSYG00000007903	SRSF4	95	82.353	Carlito_syrichta
ENSCHIG00000022096	SRSF4	93	70.661	ENSCAPG00000014747	SRSF4	91	67.406	Cavia_aperea
ENSCHIG00000022096	SRSF4	94	72.990	ENSCPOG00000036234	SRSF4	92	74.891	Cavia_porcellus
ENSCHIG00000022096	SRSF4	99	87.582	ENSCCAG00000033585	SRSF4	95	87.582	Cebus_capucinus
ENSCHIG00000022096	SRSF4	99	86.275	ENSCATG00000031440	SRSF4	95	86.275	Cercocebus_atys
ENSCHIG00000022096	SRSF4	94	77.320	ENSCLAG00000009008	SRSF4	66	100.000	Chinchilla_lanigera
ENSCHIG00000022096	SRSF4	93	76.139	ENSCSAG00000001022	SRSF4	92	79.046	Chlorocebus_sabaeus
ENSCHIG00000022096	SRSF4	86	76.044	ENSCHOG00000013858	SRSF4	92	72.931	Choloepus_hoffmanni
ENSCHIG00000022096	SRSF4	54	94.681	ENSCPBG00000009020	SRSF4	58	93.471	Chrysemys_picta_bellii
ENSCHIG00000022096	SRSF4	53	54.661	ENSCING00000020631	-	96	57.872	Ciona_intestinalis
ENSCHIG00000022096	SRSF4	61	43.582	ENSCING00000024718	-	71	51.119	Ciona_intestinalis
ENSCHIG00000022096	SRSF4	64	56.667	ENSCSAVG00000002581	-	97	60.076	Ciona_savignyi
ENSCHIG00000022096	SRSF4	99	86.275	ENSCANG00000028667	SRSF4	95	86.275	Colobus_angolensis_palliatus
ENSCHIG00000022096	SRSF4	58	100.000	ENSCGRG00001021115	Srsf4	92	79.837	Cricetulus_griseus_chok1gshd
ENSCHIG00000022096	SRSF4	51	80.080	ENSCGRG00000014137	Srsf4	91	78.242	Cricetulus_griseus_crigri
ENSCHIG00000022096	SRSF4	93	81.366	ENSDNOG00000047961	SRSF4	64	83.616	Dasypus_novemcinctus
ENSCHIG00000022096	SRSF4	58	99.435	ENSDORG00000002459	Srsf4	92	73.362	Dipodomys_ordii
ENSCHIG00000022096	SRSF4	51	56.371	FBgn0004587	B52	96	62.308	Drosophila_melanogaster
ENSCHIG00000022096	SRSF4	52	55.556	ENSEBUG00000005588	srsf4	67	54.231	Eptatretus_burgeri
ENSCHIG00000022096	SRSF4	53	56.221	ENSEBUG00000001681	srsf4	67	63.128	Eptatretus_burgeri
ENSCHIG00000022096	SRSF4	89	100.000	ENSEASG00005010168	SRSF4	92	81.616	Equus_asinus_asinus
ENSCHIG00000022096	SRSF4	89	100.000	ENSECAG00000021350	SRSF4	92	81.616	Equus_caballus
ENSCHIG00000022096	SRSF4	93	72.727	ENSEEUG00000008479	SRSF4	92	80.124	Erinaceus_europaeus
ENSCHIG00000022096	SRSF4	62	55.786	ENSELUG00000017551	srsf4	95	71.212	Esox_lucius
ENSCHIG00000022096	SRSF4	88	100.000	ENSFCAG00000027821	SRSF4	92	83.539	Felis_catus
ENSCHIG00000022096	SRSF4	93	70.323	ENSFALG00000001346	SRSF4	61	84.932	Ficedula_albicollis
ENSCHIG00000022096	SRSF4	60	76.531	ENSFDAG00000007332	SRSF4	62	78.049	Fukomys_damarensis
ENSCHIG00000022096	SRSF4	93	71.806	ENSGALG00000050314	SRSF4	61	85.616	Gallus_gallus
ENSCHIG00000022096	SRSF4	68	59.286	ENSGAFG00000018496	srsf4	69	85.507	Gambusia_affinis
ENSCHIG00000022096	SRSF4	51	79.327	ENSGACG00000002389	srsf4	82	71.374	Gasterosteus_aculeatus
ENSCHIG00000022096	SRSF4	54	94.681	ENSGAGG00000014836	SRSF4	58	93.471	Gopherus_agassizii
ENSCHIG00000022096	SRSF4	99	86.275	ENSGGOG00000002444	SRSF4	95	86.275	Gorilla_gorilla
ENSCHIG00000022096	SRSF4	96	71.121	ENSHGLG00000011842	SRSF4	92	75.556	Heterocephalus_glaber_female
ENSCHIG00000022096	SRSF4	96	71.121	ENSHGLG00100017279	SRSF4	92	75.556	Heterocephalus_glaber_male
ENSCHIG00000022096	SRSF4	60	89.394	ENSHCOG00000012540	srsf4	97	71.103	Hippocampus_comes
ENSCHIG00000022096	SRSF4	93	80.287	ENSSTOG00000015908	SRSF4	60	97.279	Ictidomys_tridecemlineatus
ENSCHIG00000022096	SRSF4	67	82.222	ENSJJAG00000022153	Srsf4	92	73.684	Jaculus_jaculus
ENSCHIG00000022096	SRSF4	53	65.625	ENSKMAG00000013631	srsf4	81	74.879	Kryptolebias_marmoratus
ENSCHIG00000022096	SRSF4	88	94.898	ENSLAFG00000002575	SRSF4	58	99.296	Loxodonta_africana
ENSCHIG00000022096	SRSF4	99	86.275	ENSMFAG00000041784	SRSF4	95	86.275	Macaca_fascicularis
ENSCHIG00000022096	SRSF4	99	86.275	ENSMMUG00000007110	SRSF4	95	86.275	Macaca_mulatta
ENSCHIG00000022096	SRSF4	99	86.275	ENSMNEG00000034931	SRSF4	95	86.275	Macaca_nemestrina
ENSCHIG00000022096	SRSF4	99	86.275	ENSMLEG00000031619	SRSF4	95	86.275	Mandrillus_leucophaeus
ENSCHIG00000022096	SRSF4	57	85.507	ENSMAMG00000004888	srsf4	96	70.656	Mastacembelus_armatus
ENSCHIG00000022096	SRSF4	93	71.586	ENSMGAG00000002400	SRSF4	61	85.616	Meleagris_gallopavo
ENSCHIG00000022096	SRSF4	90	100.000	ENSMAUG00000021940	Srsf4	92	80.368	Mesocricetus_auratus
ENSCHIG00000022096	SRSF4	99	82.692	ENSMICG00000043567	SRSF4	95	82.692	Microcebus_murinus
ENSCHIG00000022096	SRSF4	94	74.845	ENSMOCG00000013319	Srsf4	92	80.448	Microtus_ochrogaster
ENSCHIG00000022096	SRSF4	81	61.027	ENSMMOG00000013653	srsf4	97	86.765	Mola_mola
ENSCHIG00000022096	SRSF4	53	99.435	ENSMODG00000011052	SRSF4	91	94.539	Monodelphis_domestica
ENSCHIG00000022096	SRSF4	54	71.364	ENSMALG00000013392	srsf4	86	70.866	Monopterus_albus
ENSCHIG00000022096	SRSF4	91	100.000	MGP_CAROLIEiJ_G0026555	Srsf4	92	78.776	Mus_caroli
ENSCHIG00000022096	SRSF4	85	100.000	ENSMUSG00000028911	Srsf4	92	78.571	Mus_musculus
ENSCHIG00000022096	SRSF4	61	100.000	MGP_PahariEiJ_G0028887	Srsf4	92	79.303	Mus_pahari
ENSCHIG00000022096	SRSF4	85	100.000	MGP_SPRETEiJ_G0027535	Srsf4	92	79.184	Mus_spretus
ENSCHIG00000022096	SRSF4	89	100.000	ENSMPUG00000015470	SRSF4	67	100.000	Mustela_putorius_furo
ENSCHIG00000022096	SRSF4	57	100.000	ENSMLUG00000014770	SRSF4	92	81.328	Myotis_lucifugus
ENSCHIG00000022096	SRSF4	93	79.503	ENSNGAG00000012225	Srsf4	92	100.000	Nannospalax_galili
ENSCHIG00000022096	SRSF4	99	86.275	ENSNLEG00000009916	SRSF4	95	86.275	Nomascus_leucogenys
ENSCHIG00000022096	SRSF4	96	78.156	ENSOPRG00000010098	SRSF4	93	72.052	Ochotona_princeps
ENSCHIG00000022096	SRSF4	87	100.000	ENSODEG00000003230	SRSF4	66	100.000	Octodon_degus
ENSCHIG00000022096	SRSF4	85	62.169	ENSOANG00000015169	SRSF4	56	86.611	Ornithorhynchus_anatinus
ENSCHIG00000022096	SRSF4	93	71.522	ENSOCUG00000001837	SRSF4	60	95.270	Oryctolagus_cuniculus
ENSCHIG00000022096	SRSF4	53	60.690	ENSOMEG00000005541	srsf4	51	87.151	Oryzias_melastigma
ENSCHIG00000022096	SRSF4	93	80.328	ENSOGAG00000015515	SRSF4	92	81.557	Otolemur_garnettii
ENSCHIG00000022096	SRSF4	99	86.275	ENSPPAG00000028357	SRSF4	95	86.275	Pan_paniscus
ENSCHIG00000022096	SRSF4	88	100.000	ENSPPRG00000016248	SRSF4	92	83.539	Panthera_pardus
ENSCHIG00000022096	SRSF4	99	86.275	ENSPTRG00000000445	SRSF4	95	86.275	Pan_troglodytes
ENSCHIG00000022096	SRSF4	99	86.275	ENSPANG00000021937	SRSF4	95	86.275	Papio_anubis
ENSCHIG00000022096	SRSF4	61	74.671	ENSPEMG00000003365	Srsf4	91	76.063	Peromyscus_maniculatus_bairdii
ENSCHIG00000022096	SRSF4	50	77.670	ENSPLAG00000008812	srsf4	77	74.436	Poecilia_latipinna
ENSCHIG00000022096	SRSF4	93	75.488	ENSPPYG00000001629	SRSF4	92	77.439	Pongo_abelii
ENSCHIG00000022096	SRSF4	89	99.438	ENSPCAG00000009879	SRSF4	92	76.434	Procavia_capensis
ENSCHIG00000022096	SRSF4	99	82.051	ENSPCOG00000027341	SRSF4	95	82.051	Propithecus_coquereli
ENSCHIG00000022096	SRSF4	75	73.554	ENSPVAG00000012500	SRSF4	67	73.554	Pteropus_vampyrus
ENSCHIG00000022096	SRSF4	58	95.017	ENSRNOG00000010007	Srsf4	92	80.041	Rattus_norvegicus
ENSCHIG00000022096	SRSF4	99	85.621	ENSRBIG00000035789	SRSF4	95	85.621	Rhinopithecus_bieti
ENSCHIG00000022096	SRSF4	99	85.621	ENSRROG00000029463	SRSF4	95	85.621	Rhinopithecus_roxellana
ENSCHIG00000022096	SRSF4	99	86.928	ENSSBOG00000027098	SRSF4	95	86.928	Saimiri_boliviensis_boliviensis
ENSCHIG00000022096	SRSF4	53	90.253	ENSSHAG00000012407	SRSF4	90	92.748	Sarcophilus_harrisii
ENSCHIG00000022096	SRSF4	74	63.192	ENSSMAG00000001707	srsf4	98	60.656	Scophthalmus_maximus
ENSCHIG00000022096	SRSF4	57	66.914	ENSSDUG00000007387	srsf4	54	87.640	Seriola_dumerili
ENSCHIG00000022096	SRSF4	65	54.962	ENSSLDG00000009745	srsf4	98	56.985	Seriola_lalandi_dorsalis
ENSCHIG00000022096	SRSF4	51	70.076	ENSSARG00000001277	SRSF4	53	75.417	Sorex_araneus
ENSCHIG00000022096	SRSF4	61	86.792	ENSSPUG00000015318	-	57	86.957	Sphenodon_punctatus
ENSCHIG00000022096	SRSF4	51	85.507	ENSSPAG00000014538	srsf4	83	85.950	Stegastes_partitus
ENSCHIG00000022096	SRSF4	83	89.744	ENSSSCG00000003589	SRSF4	94	86.404	Sus_scrofa
ENSCHIG00000022096	SRSF4	80	97.183	ENSTGUG00000000765	SRSF4	57	82.031	Taeniopygia_guttata
ENSCHIG00000022096	SRSF4	54	67.626	ENSTRUG00000011891	srsf4	83	65.441	Takifugu_rubripes
ENSCHIG00000022096	SRSF4	91	100.000	ENSTTRG00000002572	SRSF4	92	84.836	Tursiops_truncatus
ENSCHIG00000022096	SRSF4	93	84.568	ENSUAMG00000006106	SRSF4	92	83.537	Ursus_americanus
ENSCHIG00000022096	SRSF4	86	82.927	ENSVVUG00000012690	SRSF4	90	81.996	Vulpes_vulpes