EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000022196 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1208 bases
Position: chr6:56293138-56294345
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000025399	RRM_1	PF00076.22	6.1e-13	1	1
ENSCHIP00000025399	RRM_3	PF08777.11	4.8e-27	1	1
ENSCHIP00000025399	La	PF05383.17	4.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000033261	-	1179	-	ENSCHIP00000025399	392 (aa)	-	UPI000D195590

Gene Model

Click here to download ENSCHIG00000022196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000022196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000022196	-	100	93.580	ENSCHIG00000022624	-	100	93.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000022196	-	100	87.990	ENSG00000138385	SSB	100	95.109	Homo_sapiens
ENSCHIG00000022196	-	82	57.317	ENSAPOG00000003448	ssb	100	52.020	Acanthochromis_polyacanthus
ENSCHIG00000022196	-	100	85.714	ENSAMEG00000010507	SSB	100	85.714	Ailuropoda_melanoleuca
ENSCHIG00000022196	-	83	57.879	ENSACIG00000001738	ssb	88	61.789	Amphilophus_citrinellus
ENSCHIG00000022196	-	82	58.769	ENSAOCG00000020398	ssb	100	52.778	Amphiprion_ocellaris
ENSCHIG00000022196	-	82	58.769	ENSAPEG00000020395	ssb	100	52.778	Amphiprion_percula
ENSCHIG00000022196	-	99	53.713	ENSATEG00000016884	ssb	100	54.208	Anabas_testudineus
ENSCHIG00000022196	-	100	66.901	ENSAPLG00000006109	SSB	100	68.384	Anas_platyrhynchos
ENSCHIG00000022196	-	100	63.054	ENSACAG00000017008	SSB	99	63.300	Anolis_carolinensis
ENSCHIG00000022196	-	100	80.000	ENSANAG00000027195	-	100	80.000	Aotus_nancymaae
ENSCHIG00000022196	-	99	51.378	ENSACLG00000010798	ssb	100	50.743	Astatotilapia_calliptera
ENSCHIG00000022196	-	82	56.173	ENSAMXG00000012606	ssb	100	51.582	Astyanax_mexicanus
ENSCHIG00000022196	-	100	92.346	ENSBTAG00000008716	SSB	100	92.346	Bos_taurus
ENSCHIG00000022196	-	75	34.219	WBGene00016653	C44E4.4	91	31.768	Caenorhabditis_elegans
ENSCHIG00000022196	-	100	87.654	ENSCJAG00000045073	SSB	100	87.654	Callithrix_jacchus
ENSCHIG00000022196	-	100	88.424	ENSCAFG00000012418	SSB	100	88.424	Canis_familiaris
ENSCHIG00000022196	-	100	88.424	ENSCAFG00020002900	SSB	100	88.424	Canis_lupus_dingo
ENSCHIG00000022196	-	100	89.136	ENSTSYG00000000097	SSB	100	89.136	Carlito_syrichta
ENSCHIG00000022196	-	100	89.383	ENSCPOG00000003338	SSB	100	89.383	Cavia_porcellus
ENSCHIG00000022196	-	100	88.148	ENSCCAG00000035147	SSB	100	88.148	Cebus_capucinus
ENSCHIG00000022196	-	100	68.148	ENSCATG00000036701	SSB	100	68.148	Cercocebus_atys
ENSCHIG00000022196	-	100	66.914	ENSCATG00000042909	-	100	66.914	Cercocebus_atys
ENSCHIG00000022196	-	100	88.889	ENSCLAG00000015617	-	100	88.889	Chinchilla_lanigera
ENSCHIG00000022196	-	98	80.556	ENSCSAG00000018390	-	100	80.556	Chlorocebus_sabaeus
ENSCHIG00000022196	-	100	88.395	ENSCSAG00000015200	SSB	89	88.395	Chlorocebus_sabaeus
ENSCHIG00000022196	-	100	88.148	ENSCHOG00000007763	SSB	100	88.148	Choloepus_hoffmanni
ENSCHIG00000022196	-	100	72.861	ENSCPBG00000006519	SSB	100	73.350	Chrysemys_picta_bellii
ENSCHIG00000022196	-	98	69.095	ENSCANG00000028838	-	95	69.095	Colobus_angolensis_palliatus
ENSCHIG00000022196	-	100	88.889	ENSCANG00000027695	SSB	100	88.889	Colobus_angolensis_palliatus
ENSCHIG00000022196	-	100	76.485	ENSCANG00000033240	-	100	76.485	Colobus_angolensis_palliatus
ENSCHIG00000022196	-	100	73.775	ENSCGRG00001024831	Ssb	100	75.245	Cricetulus_griseus_chok1gshd
ENSCHIG00000022196	-	100	73.775	ENSCGRG00000005387	Ssb	100	75.245	Cricetulus_griseus_crigri
ENSCHIG00000022196	-	98	54.250	ENSCSEG00000011599	ssb	99	55.000	Cynoglossus_semilaevis
ENSCHIG00000022196	-	99	54.187	ENSCVAG00000021558	ssb	100	54.300	Cyprinodon_variegatus
ENSCHIG00000022196	-	98	53.616	ENSDARG00000029252	ssb	99	54.975	Danio_rerio
ENSCHIG00000022196	-	100	87.901	ENSDNOG00000013450	SSB	100	87.901	Dasypus_novemcinctus
ENSCHIG00000022196	-	100	79.167	ENSDORG00000005543	Ssb	100	79.167	Dipodomys_ordii
ENSCHIG00000022196	-	86	33.621	FBgn0011638	La	92	32.796	Drosophila_melanogaster
ENSCHIG00000022196	-	60	90.050	ENSETEG00000004614	-	61	90.050	Echinops_telfairi
ENSCHIG00000022196	-	81	49.068	ENSEBUG00000001237	ssb	87	48.235	Eptatretus_burgeri
ENSCHIG00000022196	-	100	90.123	ENSEASG00005022835	SSB	100	90.123	Equus_asinus_asinus
ENSCHIG00000022196	-	100	90.633	ENSECAG00000018495	SSB	100	90.633	Equus_caballus
ENSCHIG00000022196	-	84	81.481	ENSEEUG00000008077	SSB	78	73.267	Erinaceus_europaeus
ENSCHIG00000022196	-	83	61.747	ENSELUG00000020929	ssb	100	57.037	Esox_lucius
ENSCHIG00000022196	-	100	88.670	ENSFCAG00000011601	SSB	100	88.670	Felis_catus
ENSCHIG00000022196	-	100	71.007	ENSFALG00000000930	SSB	100	71.007	Ficedula_albicollis
ENSCHIG00000022196	-	100	88.395	ENSFDAG00000000598	SSB	100	88.395	Fukomys_damarensis
ENSCHIG00000022196	-	65	54.580	ENSFHEG00000003268	ssb	89	52.249	Fundulus_heteroclitus
ENSCHIG00000022196	-	97	52.854	ENSGMOG00000002664	ssb	99	52.985	Gadus_morhua
ENSCHIG00000022196	-	100	71.324	ENSGALG00000009677	SSB	100	71.324	Gallus_gallus
ENSCHIG00000022196	-	99	52.217	ENSGAFG00000002749	ssb	100	52.709	Gambusia_affinis
ENSCHIG00000022196	-	99	51.716	ENSGACG00000005107	ssb	100	51.961	Gasterosteus_aculeatus
ENSCHIG00000022196	-	100	72.127	ENSGAGG00000007807	SSB	100	72.616	Gopherus_agassizii
ENSCHIG00000022196	-	100	74.321	ENSGGOG00000024891	-	100	74.321	Gorilla_gorilla
ENSCHIG00000022196	-	61	83.333	ENSGGOG00000023471	-	100	83.333	Gorilla_gorilla
ENSCHIG00000022196	-	99	50.627	ENSHBUG00000006584	ssb	100	50.248	Haplochromis_burtoni
ENSCHIG00000022196	-	100	80.344	ENSHGLG00000004478	-	100	80.344	Heterocephalus_glaber_female
ENSCHIG00000022196	-	100	81.235	ENSHGLG00000005832	-	100	81.235	Heterocephalus_glaber_female
ENSCHIG00000022196	-	100	87.379	ENSHGLG00000017580	-	100	87.379	Heterocephalus_glaber_female
ENSCHIG00000022196	-	100	87.379	ENSHGLG00100003084	-	100	87.379	Heterocephalus_glaber_male
ENSCHIG00000022196	-	100	76.790	ENSHGLG00100008767	-	100	76.790	Heterocephalus_glaber_male
ENSCHIG00000022196	-	97	50.370	ENSHCOG00000019011	ssb	99	51.385	Hippocampus_comes
ENSCHIG00000022196	-	81	61.059	ENSIPUG00000003681	SSB	99	54.975	Ictalurus_punctatus
ENSCHIG00000022196	-	100	89.136	ENSSTOG00000008416	SSB	100	89.136	Ictidomys_tridecemlineatus
ENSCHIG00000022196	-	99	64.646	ENSJJAG00000016250	-	99	64.646	Jaculus_jaculus
ENSCHIG00000022196	-	100	76.019	ENSJJAG00000023158	-	100	76.019	Jaculus_jaculus
ENSCHIG00000022196	-	99	53.350	ENSKMAG00000017317	ssb	100	53.846	Kryptolebias_marmoratus
ENSCHIG00000022196	-	98	51.621	ENSLBEG00000017345	ssb	100	52.228	Labrus_bergylta
ENSCHIG00000022196	-	99	63.145	ENSLACG00000014056	SSB	99	64.461	Latimeria_chalumnae
ENSCHIG00000022196	-	98	61.845	ENSLOCG00000007933	ssb	99	63.591	Lepisosteus_oculatus
ENSCHIG00000022196	-	76	68.439	ENSLAFG00000026721	-	99	68.439	Loxodonta_africana
ENSCHIG00000022196	-	100	81.991	ENSLAFG00000000867	-	100	83.175	Loxodonta_africana
ENSCHIG00000022196	-	100	74.752	ENSLAFG00000028909	-	100	74.752	Loxodonta_africana
ENSCHIG00000022196	-	100	88.642	ENSMFAG00000039066	SSB	100	88.642	Macaca_fascicularis
ENSCHIG00000022196	-	90	77.809	ENSMFAG00000041478	-	99	77.809	Macaca_fascicularis
ENSCHIG00000022196	-	99	62.283	ENSMMUG00000039889	-	100	62.283	Macaca_mulatta
ENSCHIG00000022196	-	100	76.750	ENSMMUG00000011724	-	97	76.750	Macaca_mulatta
ENSCHIG00000022196	-	100	88.642	ENSMMUG00000023051	SSB	100	88.642	Macaca_mulatta
ENSCHIG00000022196	-	90	77.809	ENSMNEG00000034698	-	99	77.809	Macaca_nemestrina
ENSCHIG00000022196	-	100	77.150	ENSMNEG00000028321	SSB	85	98.261	Macaca_nemestrina
ENSCHIG00000022196	-	100	88.642	ENSMLEG00000035717	SSB	100	88.642	Mandrillus_leucophaeus
ENSCHIG00000022196	-	100	65.909	ENSMLEG00000042644	-	100	65.909	Mandrillus_leucophaeus
ENSCHIG00000022196	-	82	60.245	ENSMAMG00000004800	ssb	100	54.591	Mastacembelus_armatus
ENSCHIG00000022196	-	99	51.378	ENSMZEG00005005749	ssb	100	50.743	Maylandia_zebra
ENSCHIG00000022196	-	100	70.343	ENSMGAG00000010328	SSB	99	74.146	Meleagris_gallopavo
ENSCHIG00000022196	-	99	89.082	ENSMICG00000028252	-	99	89.082	Microcebus_murinus
ENSCHIG00000022196	-	98	85.530	ENSMICG00000033304	-	96	85.530	Microcebus_murinus
ENSCHIG00000022196	-	100	49.148	ENSMODG00000019271	-	100	49.148	Monodelphis_domestica
ENSCHIG00000022196	-	100	74.265	ENSMODG00000008227	-	100	74.755	Monodelphis_domestica
ENSCHIG00000022196	-	84	77.987	ENSMODG00000007027	-	99	77.987	Monodelphis_domestica
ENSCHIG00000022196	-	83	58.912	ENSMALG00000008045	ssb	86	56.267	Monopterus_albus
ENSCHIG00000022196	-	100	74.038	MGP_CAROLIEiJ_G0023629	-	100	89.130	Mus_caroli
ENSCHIG00000022196	-	100	73.317	ENSMUSG00000068882	Ssb	100	89.130	Mus_musculus
ENSCHIG00000022196	-	100	73.012	MGP_PahariEiJ_G0025081	-	100	89.130	Mus_pahari
ENSCHIG00000022196	-	100	73.317	MGP_SPRETEiJ_G0024551	Ssb	100	89.130	Mus_spretus
ENSCHIG00000022196	-	100	89.383	ENSMPUG00000000785	SSB	100	89.383	Mustela_putorius_furo
ENSCHIG00000022196	-	100	84.173	ENSMLUG00000016316	SSB	100	84.173	Myotis_lucifugus
ENSCHIG00000022196	-	99	51.880	ENSNBRG00000012661	ssb	100	51.485	Neolamprologus_brichardi
ENSCHIG00000022196	-	100	65.271	ENSNLEG00000028754	-	100	65.764	Nomascus_leucogenys
ENSCHIG00000022196	-	100	88.889	ENSNLEG00000004958	SSB	100	88.889	Nomascus_leucogenys
ENSCHIG00000022196	-	63	82.661	ENSMEUG00000001650	-	100	82.661	Notamacropus_eugenii
ENSCHIG00000022196	-	71	62.069	ENSOPRG00000008475	-	100	65.517	Ochotona_princeps
ENSCHIG00000022196	-	93	86.685	ENSODEG00000004202	-	100	86.685	Octodon_degus
ENSCHIG00000022196	-	83	56.535	ENSONIG00000008776	ssb	100	50.743	Oreochromis_niloticus
ENSCHIG00000022196	-	100	77.778	ENSOANG00000008543	SSB	100	77.778	Ornithorhynchus_anatinus
ENSCHIG00000022196	-	100	88.148	ENSOCUG00000010396	SSB	100	88.148	Oryctolagus_cuniculus
ENSCHIG00000022196	-	99	53.563	ENSORLG00000017208	ssb	100	54.568	Oryzias_latipes
ENSCHIG00000022196	-	83	59.878	ENSORLG00020022574	ssb	100	54.187	Oryzias_latipes_hni
ENSCHIG00000022196	-	99	53.580	ENSORLG00015016592	ssb	100	54.074	Oryzias_latipes_hsok
ENSCHIG00000022196	-	81	60.185	ENSOMEG00000003193	ssb	100	54.815	Oryzias_melastigma
ENSCHIG00000022196	-	100	82.938	ENSOGAG00000029768	SSB	100	82.938	Otolemur_garnettii
ENSCHIG00000022196	-	100	93.580	ENSOARG00000002906	SSB	100	93.580	Ovis_aries
ENSCHIG00000022196	-	97	68.274	ENSPPAG00000006189	-	96	71.774	Pan_paniscus
ENSCHIG00000022196	-	100	87.990	ENSPPAG00000042673	SSB	100	87.990	Pan_paniscus
ENSCHIG00000022196	-	100	73.580	ENSPPAG00000032427	-	100	86.047	Pan_paniscus
ENSCHIG00000022196	-	100	88.670	ENSPPRG00000006599	SSB	100	88.670	Panthera_pardus
ENSCHIG00000022196	-	100	88.424	ENSPTIG00000011021	SSB	97	88.424	Panthera_tigris_altaica
ENSCHIG00000022196	-	100	87.990	ENSPTRG00000012620	SSB	100	87.990	Pan_troglodytes
ENSCHIG00000022196	-	100	70.398	ENSPTRG00000042880	-	100	70.398	Pan_troglodytes
ENSCHIG00000022196	-	98	61.013	ENSPANG00000031877	-	94	61.013	Papio_anubis
ENSCHIG00000022196	-	100	88.642	ENSPANG00000007440	SSB	100	88.642	Papio_anubis
ENSCHIG00000022196	-	100	66.000	ENSPANG00000034126	-	100	66.500	Papio_anubis
ENSCHIG00000022196	-	98	58.647	ENSPKIG00000019325	ssb	99	58.313	Paramormyrops_kingsleyae
ENSCHIG00000022196	-	100	71.638	ENSPSIG00000002265	SSB	93	72.127	Pelodiscus_sinensis
ENSCHIG00000022196	-	74	54.576	ENSPMGG00000020075	ssb	87	51.198	Periophthalmus_magnuspinnatus
ENSCHIG00000022196	-	83	46.970	ENSPMAG00000002982	ssb	100	41.026	Petromyzon_marinus
ENSCHIG00000022196	-	100	77.094	ENSPCIG00000028591	-	100	77.340	Phascolarctos_cinereus
ENSCHIG00000022196	-	99	53.202	ENSPFOG00000009650	ssb	100	53.448	Poecilia_formosa
ENSCHIG00000022196	-	83	58.434	ENSPLAG00000020498	ssb	100	53.202	Poecilia_latipinna
ENSCHIG00000022196	-	99	53.448	ENSPMEG00000001051	ssb	100	53.202	Poecilia_mexicana
ENSCHIG00000022196	-	83	58.133	ENSPREG00000003708	ssb	99	53.646	Poecilia_reticulata
ENSCHIG00000022196	-	100	88.889	ENSPPYG00000012919	SSB	100	88.889	Pongo_abelii
ENSCHIG00000022196	-	94	83.947	ENSPCAG00000010276	SSB	100	83.947	Procavia_capensis
ENSCHIG00000022196	-	100	77.778	ENSPCOG00000023189	-	100	77.778	Propithecus_coquereli
ENSCHIG00000022196	-	100	85.679	ENSPCOG00000015741	-	100	85.679	Propithecus_coquereli
ENSCHIG00000022196	-	87	89.518	ENSPVAG00000006615	SSB	100	89.518	Pteropus_vampyrus
ENSCHIG00000022196	-	99	51.378	ENSPNYG00000006444	ssb	100	50.743	Pundamilia_nyererei
ENSCHIG00000022196	-	82	58.333	ENSPNAG00000011708	ssb	100	53.790	Pygocentrus_nattereri
ENSCHIG00000022196	-	100	73.798	ENSRNOG00000007998	Ssb	100	73.798	Rattus_norvegicus
ENSCHIG00000022196	-	100	74.442	ENSRNOG00000011606	AABR07061825.1	100	74.442	Rattus_norvegicus
ENSCHIG00000022196	-	100	74.390	ENSRBIG00000041972	SSB	88	98.261	Rhinopithecus_bieti
ENSCHIG00000022196	-	100	64.286	ENSRBIG00000029918	-	100	64.532	Rhinopithecus_bieti
ENSCHIG00000022196	-	89	80.110	ENSRBIG00000041608	-	98	80.110	Rhinopithecus_bieti
ENSCHIG00000022196	-	93	74.339	ENSRBIG00000041232	-	98	74.339	Rhinopithecus_bieti
ENSCHIG00000022196	-	97	78.803	ENSRROG00000034102	-	98	79.146	Rhinopithecus_roxellana
ENSCHIG00000022196	-	100	88.889	ENSRROG00000040346	SSB	100	88.889	Rhinopithecus_roxellana
ENSCHIG00000022196	-	100	73.399	ENSRROG00000007149	-	100	73.399	Rhinopithecus_roxellana
ENSCHIG00000022196	-	98	75.696	ENSRROG00000031684	-	100	75.696	Rhinopithecus_roxellana
ENSCHIG00000022196	-	100	88.642	ENSSBOG00000027204	SSB	100	88.642	Saimiri_boliviensis_boliviensis
ENSCHIG00000022196	-	100	77.340	ENSSHAG00000018062	SSB	100	77.586	Sarcophilus_harrisii
ENSCHIG00000022196	-	99	57.245	ENSSFOG00015000550	ssb	100	59.413	Scleropages_formosus
ENSCHIG00000022196	-	98	51.157	ENSSMAG00000013885	ssb	99	51.554	Scophthalmus_maximus
ENSCHIG00000022196	-	99	53.333	ENSSDUG00000020117	ssb	100	53.846	Seriola_dumerili
ENSCHIG00000022196	-	99	52.000	ENSSLDG00000002525	ssb	100	51.750	Seriola_lalandi_dorsalis
ENSCHIG00000022196	-	94	79.373	ENSSARG00000007747	SSB	100	79.373	Sorex_araneus
ENSCHIG00000022196	-	100	70.443	ENSSPUG00000012112	SSB	100	71.675	Sphenodon_punctatus
ENSCHIG00000022196	-	81	58.951	ENSSPAG00000005696	ssb	100	53.283	Stegastes_partitus
ENSCHIG00000022196	-	98	74.430	ENSSSCG00000015938	SSB	98	75.253	Sus_scrofa
ENSCHIG00000022196	-	100	70.803	ENSTGUG00000007942	SSB	100	70.803	Taeniopygia_guttata
ENSCHIG00000022196	-	82	59.021	ENSTRUG00000017839	ssb	100	53.980	Takifugu_rubripes
ENSCHIG00000022196	-	87	58.501	ENSTNIG00000000915	ssb	94	58.501	Tetraodon_nigroviridis
ENSCHIG00000022196	-	82	98.261	ENSTBEG00000009056	SSB	82	98.261	Tupaia_belangeri
ENSCHIG00000022196	-	100	88.916	ENSTTRG00000002152	SSB	100	88.916	Tursiops_truncatus
ENSCHIG00000022196	-	93	89.390	ENSUAMG00000027833	SSB	99	89.390	Ursus_americanus
ENSCHIG00000022196	-	100	88.916	ENSUMAG00000013907	SSB	100	88.916	Ursus_maritimus
ENSCHIG00000022196	-	100	88.642	ENSVPAG00000007183	SSB	100	88.642	Vicugna_pacos
ENSCHIG00000022196	-	100	88.424	ENSVVUG00000016573	SSB	78	88.424	Vulpes_vulpes
ENSCHIG00000022196	-	99	56.313	ENSXETG00000025402	ssb	92	57.935	Xenopus_tropicalis
ENSCHIG00000022196	-	83	55.589	ENSXCOG00000019109	ssb	99	51.697	Xiphophorus_couchianus
ENSCHIG00000022196	-	99	52.463	ENSXMAG00000004888	ssb	100	52.956	Xiphophorus_maculatus