EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000022271 (Gene tree)
Gene ID: 102182649
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 3491 bases
Position: chr3:103692339-103695829
Accession: 102182649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000025571	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000033433	-	612	XM_005677469	ENSCHIP00000025571	203 (aa)	XP_005677526	UPI00084713E4

Gene Model

Click here to download ENSCHIG00000022271's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000022271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000022271	-	79	39.506	ENSCHIG00000004808	HRAS	85	39.506
ENSCHIG00000022271	-	81	38.788	ENSCHIG00000009815	RAB23	69	38.788
ENSCHIG00000022271	-	80	40.476	ENSCHIG00000002776	RAB9B	83	40.476
ENSCHIG00000022271	-	81	32.121	ENSCHIG00000017350	RHEB	87	32.121
ENSCHIG00000022271	-	91	36.757	ENSCHIG00000026575	KRAS	97	37.306
ENSCHIG00000022271	-	95	39.062	ENSCHIG00000025419	-	89	39.062
ENSCHIG00000022271	-	80	30.588	ENSCHIG00000024365	RASL11B	68	30.588
ENSCHIG00000022271	-	91	53.886	ENSCHIG00000015549	RAB1B	96	53.886
ENSCHIG00000022271	-	62	31.429	ENSCHIG00000010007	ARFRP1	67	31.429
ENSCHIG00000022271	-	89	36.735	ENSCHIG00000001895	RAB9A	95	36.735
ENSCHIG00000022271	-	79	42.236	ENSCHIG00000012960	RAB5C	75	42.236
ENSCHIG00000022271	-	86	43.750	ENSCHIG00000008749	RAB18	85	43.750
ENSCHIG00000022271	-	95	38.342	ENSCHIG00000010333	RAB5B	89	38.342
ENSCHIG00000022271	-	78	43.671	ENSCHIG00000023957	RAB6A	76	43.671
ENSCHIG00000022271	-	79	46.250	ENSCHIG00000022426	-	71	46.250
ENSCHIG00000022271	-	86	46.629	ENSCHIG00000000158	RAB39B	84	46.629
ENSCHIG00000022271	-	97	40.777	ENSCHIG00000012183	-	95	40.777
ENSCHIG00000022271	-	83	39.444	ENSCHIG00000014703	RAB34	69	39.444
ENSCHIG00000022271	-	84	54.118	ENSCHIG00000025288	RAB15	80	54.118
ENSCHIG00000022271	-	79	39.130	ENSCHIG00000000146	RAB31	83	39.130
ENSCHIG00000022271	-	79	36.810	ENSCHIG00000025837	MRAS	78	36.810
ENSCHIG00000022271	-	83	47.929	ENSCHIG00000020374	RAB2A	80	47.929
ENSCHIG00000022271	-	80	30.864	ENSCHIG00000025632	-	71	30.864
ENSCHIG00000022271	-	98	43.719	ENSCHIG00000020601	RAB30	93	45.745
ENSCHIG00000022271	-	79	38.272	ENSCHIG00000023175	NRAS	85	38.272
ENSCHIG00000022271	-	65	30.075	ENSCHIG00000017997	-	71	30.075
ENSCHIG00000022271	-	85	30.556	ENSCHIG00000013821	DNAJC27	66	30.556
ENSCHIG00000022271	-	91	37.037	ENSCHIG00000017305	RAB22A	97	37.037
ENSCHIG00000022271	-	65	30.075	ENSCHIG00000005883	-	71	30.075
ENSCHIG00000022271	-	78	42.405	ENSCHIG00000016452	RAB6B	76	42.405
ENSCHIG00000022271	-	67	30.882	ENSCHIG00000018906	ARF5	72	30.882
ENSCHIG00000022271	-	91	54.737	ENSCHIG00000014060	RAB1A	93	54.737
ENSCHIG00000022271	-	96	35.678	ENSCHIG00000001138	RAB7A	96	35.678
ENSCHIG00000022271	-	78	31.646	ENSCHIG00000000591	-	67	31.646
ENSCHIG00000022271	-	87	43.182	ENSCHIG00000018911	RAB25	83	43.182
ENSCHIG00000022271	-	96	35.149	ENSCHIG00000021370	RAB36	75	35.149
ENSCHIG00000022271	-	83	35.632	ENSCHIG00000011004	RERG	84	35.632
ENSCHIG00000022271	-	83	48.214	ENSCHIG00000017531	-	81	48.214
ENSCHIG00000022271	-	88	50.556	ENSCHIG00000016103	RAB12	74	50.556
ENSCHIG00000022271	-	81	44.242	ENSCHIG00000026983	RAB14	77	44.242
ENSCHIG00000022271	-	92	39.303	ENSCHIG00000020393	RAB33B	88	39.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000022271	-	100	97.537	ENSG00000143545	RAB13	100	97.537	Homo_sapiens
ENSCHIG00000022271	-	99	75.622	ENSACIG00000008584	rab13	97	75.622	Amphilophus_citrinellus
ENSCHIG00000022271	-	100	96.059	ENSANAG00000030247	-	100	96.059	Aotus_nancymaae
ENSCHIG00000022271	-	99	77.723	ENSAMXG00000030712	rab13	99	77.723	Astyanax_mexicanus
ENSCHIG00000022271	-	100	99.507	ENSBTAG00000017604	RAB13	100	99.507	Bos_taurus
ENSCHIG00000022271	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSCHIG00000022271	-	93	97.354	ENSCJAG00000009933	-	100	96.059	Callithrix_jacchus
ENSCHIG00000022271	-	100	90.640	ENSCPOG00000011491	-	100	90.640	Cavia_porcellus
ENSCHIG00000022271	-	100	97.044	ENSCCAG00000028502	-	100	97.044	Cebus_capucinus
ENSCHIG00000022271	-	100	97.537	ENSCATG00000041779	-	100	97.537	Cercocebus_atys
ENSCHIG00000022271	-	100	90.148	ENSCLAG00000006603	-	100	90.148	Chinchilla_lanigera
ENSCHIG00000022271	-	100	97.537	ENSCANG00000036573	-	100	97.537	Colobus_angolensis_palliatus
ENSCHIG00000022271	-	100	94.089	ENSCGRG00001021505	Rab13	100	94.089	Cricetulus_griseus_chok1gshd
ENSCHIG00000022271	-	100	94.089	ENSCGRG00000012126	Rab13	100	94.089	Cricetulus_griseus_crigri
ENSCHIG00000022271	-	99	75.000	ENSCSEG00000002358	rab13	99	75.000	Cynoglossus_semilaevis
ENSCHIG00000022271	-	99	77.670	ENSDARG00000034771	rab13	99	77.670	Danio_rerio
ENSCHIG00000022271	-	100	93.103	ENSDORG00000001591	Rab13	100	93.103	Dipodomys_ordii
ENSCHIG00000022271	-	100	96.552	ENSEASG00005000683	-	100	96.552	Equus_asinus_asinus
ENSCHIG00000022271	-	100	96.552	ENSECAG00000016551	RAB13	100	96.552	Equus_caballus
ENSCHIG00000022271	-	100	88.177	ENSEEUG00000001233	-	100	88.177	Erinaceus_europaeus
ENSCHIG00000022271	-	99	76.585	ENSELUG00000012801	rab13	99	76.585	Esox_lucius
ENSCHIG00000022271	-	100	90.148	ENSFCAG00000045269	-	100	90.148	Felis_catus
ENSCHIG00000022271	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSCHIG00000022271	-	85	85.549	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSCHIG00000022271	-	96	78.351	ENSGACG00000011925	rab13	96	78.351	Gasterosteus_aculeatus
ENSCHIG00000022271	-	85	90.751	ENSGAGG00000000742	-	100	80.583	Gopherus_agassizii
ENSCHIG00000022271	-	100	97.537	ENSGGOG00000023693	RAB13	100	97.537	Gorilla_gorilla
ENSCHIG00000022271	-	100	88.670	ENSHGLG00000008749	RAB13	100	88.670	Heterocephalus_glaber_female
ENSCHIG00000022271	-	100	88.670	ENSHGLG00100013608	RAB13	100	88.670	Heterocephalus_glaber_male
ENSCHIG00000022271	-	85	86.127	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSCHIG00000022271	-	99	76.098	ENSIPUG00000003199	rab13	99	76.098	Ictalurus_punctatus
ENSCHIG00000022271	-	100	96.059	ENSSTOG00000011222	-	100	96.059	Ictidomys_tridecemlineatus
ENSCHIG00000022271	-	100	91.626	ENSJJAG00000010575	Rab13	100	91.626	Jaculus_jaculus
ENSCHIG00000022271	-	99	75.000	ENSKMAG00000001908	rab13	99	75.000	Kryptolebias_marmoratus
ENSCHIG00000022271	-	99	75.980	ENSLBEG00000026779	rab13	99	75.980	Labrus_bergylta
ENSCHIG00000022271	-	91	74.054	ENSLACG00000008103	-	100	74.054	Latimeria_chalumnae
ENSCHIG00000022271	-	100	97.537	ENSMFAG00000041018	RAB13	100	97.537	Macaca_fascicularis
ENSCHIG00000022271	-	100	97.537	ENSMNEG00000028951	-	100	97.537	Macaca_nemestrina
ENSCHIG00000022271	-	100	97.537	ENSMLEG00000042247	-	100	97.537	Mandrillus_leucophaeus
ENSCHIG00000022271	-	99	74.272	ENSMAMG00000014602	rab13	99	74.272	Mastacembelus_armatus
ENSCHIG00000022271	-	100	93.103	ENSMAUG00000015713	Rab13	100	93.103	Mesocricetus_auratus
ENSCHIG00000022271	-	100	94.581	ENSMICG00000010340	-	100	94.581	Microcebus_murinus
ENSCHIG00000022271	-	100	94.581	ENSMOCG00000021448	Rab13	100	94.581	Microtus_ochrogaster
ENSCHIG00000022271	-	99	90.050	ENSMODG00000017295	-	84	90.050	Monodelphis_domestica
ENSCHIG00000022271	-	100	91.626	MGP_CAROLIEiJ_G0025227	Rab13	100	91.626	Mus_caroli
ENSCHIG00000022271	-	100	90.640	ENSMUSG00000027935	Rab13	100	90.640	Mus_musculus
ENSCHIG00000022271	-	100	91.133	MGP_PahariEiJ_G0026671	Rab13	100	91.133	Mus_pahari
ENSCHIG00000022271	-	100	94.089	ENSNGAG00000010309	Rab13	100	94.089	Nannospalax_galili
ENSCHIG00000022271	-	99	74.257	ENSNBRG00000004124	rab13	99	74.257	Neolamprologus_brichardi
ENSCHIG00000022271	-	100	97.537	ENSNLEG00000028944	-	100	97.537	Nomascus_leucogenys
ENSCHIG00000022271	-	100	89.163	ENSMEUG00000009667	-	100	89.163	Notamacropus_eugenii
ENSCHIG00000022271	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSCHIG00000022271	-	100	88.670	ENSODEG00000010443	-	100	88.670	Octodon_degus
ENSCHIG00000022271	-	99	76.238	ENSONIG00000006340	rab13	99	76.238	Oreochromis_niloticus
ENSCHIG00000022271	-	87	96.045	ENSOCUG00000006286	-	99	96.045	Oryctolagus_cuniculus
ENSCHIG00000022271	-	95	80.208	ENSOMEG00000008210	rab13	87	86.127	Oryzias_melastigma
ENSCHIG00000022271	-	100	92.611	ENSOGAG00000016969	-	100	92.611	Otolemur_garnettii
ENSCHIG00000022271	-	100	97.537	ENSPPAG00000028435	-	100	97.537	Pan_paniscus
ENSCHIG00000022271	-	100	90.148	ENSPPRG00000008865	-	100	90.148	Panthera_pardus
ENSCHIG00000022271	-	100	97.537	ENSPTRG00000001370	RAB13	100	97.537	Pan_troglodytes
ENSCHIG00000022271	-	100	97.537	ENSPANG00000004479	-	100	97.537	Papio_anubis
ENSCHIG00000022271	-	99	75.248	ENSPMGG00000007680	rab13	99	75.248	Periophthalmus_magnuspinnatus
ENSCHIG00000022271	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSCHIG00000022271	-	100	89.655	ENSPCIG00000029350	-	100	89.655	Phascolarctos_cinereus
ENSCHIG00000022271	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSCHIG00000022271	-	85	83.815	ENSPREG00000017567	rab13	99	73.301	Poecilia_reticulata
ENSCHIG00000022271	-	100	97.537	ENSPPYG00000000790	-	100	97.537	Pongo_abelii
ENSCHIG00000022271	-	100	95.567	ENSPCOG00000012189	-	100	95.567	Propithecus_coquereli
ENSCHIG00000022271	-	100	93.596	ENSPVAG00000011095	-	100	93.596	Pteropus_vampyrus
ENSCHIG00000022271	-	92	81.720	ENSPNAG00000004189	rab13	95	81.720	Pygocentrus_nattereri
ENSCHIG00000022271	-	100	91.133	ENSRNOG00000016733	Rab13	100	91.133	Rattus_norvegicus
ENSCHIG00000022271	-	100	97.044	ENSRBIG00000008552	-	100	97.044	Rhinopithecus_bieti
ENSCHIG00000022271	-	100	97.044	ENSRROG00000036885	-	100	97.044	Rhinopithecus_roxellana
ENSCHIG00000022271	-	100	96.552	ENSSBOG00000020342	-	100	96.552	Saimiri_boliviensis_boliviensis
ENSCHIG00000022271	-	100	88.670	ENSSHAG00000011866	-	100	88.670	Sarcophilus_harrisii
ENSCHIG00000022271	-	100	98.030	ENSSSCG00000006564	-	100	98.030	Sus_scrofa
ENSCHIG00000022271	-	99	75.980	ENSTRUG00000024177	rab13	99	75.980	Takifugu_rubripes
ENSCHIG00000022271	-	100	94.581	ENSTBEG00000012734	-	100	94.581	Tupaia_belangeri
ENSCHIG00000022271	-	100	97.537	ENSTTRG00000011183	-	100	97.537	Tursiops_truncatus
ENSCHIG00000022271	-	71	80.556	ENSXETG00000020729	rab13	99	77.640	Xenopus_tropicalis
ENSCHIG00000022271	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus