EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000022454 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 10920 bases
Position: chr17:22296896-22307815
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000025864	Ribosomal_S27e	PF01667.17	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000033726	-	450	-	ENSCHIP00000025864	90 (aa)	-	UPI000D18CF86

Gene Model

Click here to download ENSCHIG00000022454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000022454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000022454	-	76	67.606	ENSCHIG00000012945	RPS27L	87	67.606
ENSCHIG00000022454	-	72	70.769	ENSCHIG00000003074	-	75	74.194
ENSCHIG00000022454	-	59	71.698	ENSCHIG00000010433	-	81	70.588
ENSCHIG00000022454	-	72	67.692	ENSCHIG00000010382	-	78	67.692
ENSCHIG00000022454	-	59	69.811	ENSCHIG00000009913	-	69	69.841
ENSCHIG00000022454	-	72	72.059	ENSCHIG00000020150	-	75	72.059
ENSCHIG00000022454	-	72	69.118	ENSCHIG00000003580	-	81	69.118
ENSCHIG00000022454	-	64	68.333	ENSCHIG00000009267	-	94	65.385
ENSCHIG00000022454	-	59	69.811	ENSCHIG00000005073	-	81	69.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000022454	-	72	54.412	ENSAPOG00000021447	-	50	54.412	Acanthochromis_polyacanthus
ENSCHIG00000022454	-	72	54.412	ENSAPOG00000022298	-	50	54.412	Acanthochromis_polyacanthus
ENSCHIG00000022454	-	61	69.091	ENSAMEG00000007270	-	75	66.667	Ailuropoda_melanoleuca
ENSCHIG00000022454	-	66	64.615	ENSANAG00000028244	-	85	63.415	Aotus_nancymaae
ENSCHIG00000022454	-	72	54.412	ENSACLG00000002121	-	75	54.412	Astatotilapia_calliptera
ENSCHIG00000022454	-	61	69.091	ENSCAFG00020009484	-	61	66.667	Canis_lupus_dingo
ENSCHIG00000022454	-	66	65.625	ENSCHOG00000006723	-	73	64.198	Choloepus_hoffmanni
ENSCHIG00000022454	-	60	68.519	ENSETEG00000001288	-	84	69.118	Echinops_telfairi
ENSCHIG00000022454	-	66	64.615	ENSMFAG00000039460	RPS27L	85	63.415	Macaca_fascicularis
ENSCHIG00000022454	-	66	64.615	ENSMMUG00000016350	RPS27L	85	63.415	Macaca_mulatta
ENSCHIG00000022454	-	72	54.412	ENSMZEG00005009272	-	75	54.412	Maylandia_zebra
ENSCHIG00000022454	-	60	70.370	ENSMICG00000007109	-	81	70.588	Microcebus_murinus
ENSCHIG00000022454	-	61	69.091	ENSOGAG00000002513	-	89	66.667	Otolemur_garnettii
ENSCHIG00000022454	-	66	64.615	ENSPPAG00000027359	-	85	63.415	Pan_paniscus
ENSCHIG00000022454	-	60	70.370	ENSPPRG00000023087	-	81	70.588	Panthera_pardus
ENSCHIG00000022454	-	66	64.615	ENSPTRG00000007144	-	85	63.415	Pan_troglodytes
ENSCHIG00000022454	-	66	64.615	ENSPANG00000034038	-	85	63.415	Papio_anubis
ENSCHIG00000022454	-	66	65.625	ENSPVAG00000009340	-	74	64.198	Pteropus_vampyrus
ENSCHIG00000022454	-	80	64.000	ENSSARG00000007919	-	79	64.000	Sorex_araneus
ENSCHIG00000022454	-	70	60.317	ENSTBEG00000008670	-	71	60.759	Tupaia_belangeri
ENSCHIG00000022454	-	66	64.062	ENSTTRG00000003776	-	73	62.963	Tursiops_truncatus
ENSCHIG00000022454	-	64	65.517	ENSUAMG00000024384	-	54	65.517	Ursus_americanus
ENSCHIG00000022454	-	54	65.306	ENSUAMG00000006457	-	73	65.306	Ursus_americanus
ENSCHIG00000022454	-	66	66.667	ENSVPAG00000005464	-	73	65.000	Vicugna_pacos