EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000022607 (Gene tree)
Gene ID: 102182245
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 10563 bases
Position: chr16:47839082-47849644
Accession: 102182245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000026146	B3_4	PF03483.17	6.3e-09	1	1
ENSCHIP00000026149	B3_4	PF03483.17	6.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000034008	LRRC47-201	1746	-	ENSCHIP00000026146	581 (aa)	-	UPI000D19438C
ENSCHIT00000034010	LRRC47-202	1827	XM_018060460	ENSCHIP00000026149	608 (aa)	XP_017915949	UPI0008475383

Gene Model

Click here to download ENSCHIG00000022607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000022607's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000022607	LRRC47	99	82.990	ENSG00000130764	LRRC47	99	84.602	Homo_sapiens
ENSCHIG00000022607	LRRC47	98	53.739	ENSAPOG00000019553	lrrc47	99	53.752	Acanthochromis_polyacanthus
ENSCHIG00000022607	LRRC47	79	79.130	ENSAMEG00000009152	LRRC47	100	79.348	Ailuropoda_melanoleuca
ENSCHIG00000022607	LRRC47	66	66.667	ENSAPLG00000003167	LRRC47	100	66.927	Anas_platyrhynchos
ENSCHIG00000022607	LRRC47	65	68.435	ENSACAG00000008267	LRRC47	99	68.170	Anolis_carolinensis
ENSCHIG00000022607	LRRC47	99	82.474	ENSANAG00000025576	LRRC47	99	84.083	Aotus_nancymaae
ENSCHIG00000022607	LRRC47	99	97.586	ENSBTAG00000004738	LRRC47	100	98.451	Bos_taurus
ENSCHIG00000022607	LRRC47	95	85.432	ENSCAFG00000019492	LRRC47	99	84.786	Canis_familiaris
ENSCHIG00000022607	LRRC47	99	85.442	ENSCAFG00020009667	LRRC47	99	85.714	Canis_lupus_dingo
ENSCHIG00000022607	LRRC47	95	83.124	ENSTSYG00000009326	LRRC47	96	84.022	Carlito_syrichta
ENSCHIG00000022607	LRRC47	65	76.330	ENSCAPG00000016517	LRRC47	100	75.862	Cavia_aperea
ENSCHIG00000022607	LRRC47	100	80.952	ENSCPOG00000014931	LRRC47	100	80.328	Cavia_porcellus
ENSCHIG00000022607	LRRC47	99	82.818	ENSCCAG00000024895	LRRC47	99	84.429	Cebus_capucinus
ENSCHIG00000022607	LRRC47	99	83.505	ENSCATG00000029337	LRRC47	99	84.775	Cercocebus_atys
ENSCHIG00000022607	LRRC47	98	82.548	ENSCLAG00000006093	LRRC47	99	83.016	Chinchilla_lanigera
ENSCHIG00000022607	LRRC47	99	83.505	ENSCSAG00000000727	LRRC47	99	84.775	Chlorocebus_sabaeus
ENSCHIG00000022607	LRRC47	99	61.194	ENSCPBG00000019404	LRRC47	100	60.596	Chrysemys_picta_bellii
ENSCHIG00000022607	LRRC47	78	81.128	ENSCANG00000030701	LRRC47	96	80.043	Colobus_angolensis_palliatus
ENSCHIG00000022607	LRRC47	98	81.675	ENSCGRG00001015159	Lrrc47	90	81.282	Cricetulus_griseus_chok1gshd
ENSCHIG00000022607	LRRC47	65	74.536	ENSCGRG00000017336	Lrrc47	100	74.536	Cricetulus_griseus_crigri
ENSCHIG00000022607	LRRC47	98	52.448	ENSCSEG00000006217	lrrc47	95	52.972	Cynoglossus_semilaevis
ENSCHIG00000022607	LRRC47	64	78.457	ENSDORG00000016594	Lrrc47	99	79.045	Dipodomys_ordii
ENSCHIG00000022607	LRRC47	99	86.964	ENSEASG00005021788	LRRC47	99	87.543	Equus_asinus_asinus
ENSCHIG00000022607	LRRC47	98	87.631	ENSECAG00000022472	LRRC47	93	87.000	Equus_caballus
ENSCHIG00000022607	LRRC47	98	51.718	ENSELUG00000017544	lrrc47	97	50.683	Esox_lucius
ENSCHIG00000022607	LRRC47	93	85.662	ENSFCAG00000011632	LRRC47	98	84.865	Felis_catus
ENSCHIG00000022607	LRRC47	73	64.037	ENSFALG00000009631	LRRC47	99	64.908	Ficedula_albicollis
ENSCHIG00000022607	LRRC47	96	52.920	ENSGMOG00000015674	lrrc47	97	52.566	Gadus_morhua
ENSCHIG00000022607	LRRC47	98	62.500	ENSGALG00000050995	LRRC47	100	63.448	Gallus_gallus
ENSCHIG00000022607	LRRC47	98	53.054	ENSGACG00000005550	lrrc47	99	53.217	Gasterosteus_aculeatus
ENSCHIG00000022607	LRRC47	99	62.895	ENSGAGG00000022584	LRRC47	99	62.230	Gopherus_agassizii
ENSCHIG00000022607	LRRC47	99	83.162	ENSGGOG00000015571	LRRC47	99	84.775	Gorilla_gorilla
ENSCHIG00000022607	LRRC47	100	79.672	ENSHGLG00000018278	LRRC47	100	79.672	Heterocephalus_glaber_female
ENSCHIG00000022607	LRRC47	69	76.733	ENSHGLG00100008507	LRRC47	100	75.990	Heterocephalus_glaber_male
ENSCHIG00000022607	LRRC47	99	54.045	ENSHCOG00000006348	lrrc47	98	53.448	Hippocampus_comes
ENSCHIG00000022607	LRRC47	99	84.483	ENSSTOG00000027559	LRRC47	99	85.243	Ictidomys_tridecemlineatus
ENSCHIG00000022607	LRRC47	98	83.101	ENSJJAG00000017474	Lrrc47	99	82.776	Jaculus_jaculus
ENSCHIG00000022607	LRRC47	98	54.340	ENSKMAG00000003414	lrrc47	99	53.806	Kryptolebias_marmoratus
ENSCHIG00000022607	LRRC47	99	83.505	ENSLAFG00000011657	LRRC47	99	83.910	Loxodonta_africana
ENSCHIG00000022607	LRRC47	99	65.378	ENSMFAG00000045730	LRRC47	89	95.610	Macaca_fascicularis
ENSCHIG00000022607	LRRC47	98	84.348	ENSMNEG00000042488	LRRC47	100	84.932	Macaca_nemestrina
ENSCHIG00000022607	LRRC47	77	80.044	ENSMLEG00000043735	LRRC47	91	78.936	Mandrillus_leucophaeus
ENSCHIG00000022607	LRRC47	98	82.168	ENSMAUG00000021337	Lrrc47	97	82.168	Mesocricetus_auratus
ENSCHIG00000022607	LRRC47	99	82.100	ENSMICG00000026816	LRRC47	99	84.749	Microcebus_murinus
ENSCHIG00000022607	LRRC47	99	80.484	ENSMOCG00000021279	Lrrc47	99	81.771	Microtus_ochrogaster
ENSCHIG00000022607	LRRC47	98	54.101	ENSMMOG00000017007	lrrc47	99	54.101	Mola_mola
ENSCHIG00000022607	LRRC47	98	73.298	ENSMODG00000006554	LRRC47	98	72.251	Monodelphis_domestica
ENSCHIG00000022607	LRRC47	98	83.246	MGP_CAROLIEiJ_G0026864	Lrrc47	99	82.639	Mus_caroli
ENSCHIG00000022607	LRRC47	98	83.072	ENSMUSG00000029028	Lrrc47	99	82.465	Mus_musculus
ENSCHIG00000022607	LRRC47	98	82.168	MGP_PahariEiJ_G0029212	Lrrc47	99	82.465	Mus_pahari
ENSCHIG00000022607	LRRC47	98	83.246	MGP_SPRETEiJ_G0027857	Lrrc47	99	82.639	Mus_spretus
ENSCHIG00000022607	LRRC47	65	81.217	ENSMPUG00000007321	LRRC47	75	81.217	Mustela_putorius_furo
ENSCHIG00000022607	LRRC47	98	81.993	ENSNGAG00000022153	Lrrc47	99	82.957	Nannospalax_galili
ENSCHIG00000022607	LRRC47	99	81.787	ENSNLEG00000008131	LRRC47	99	82.526	Nomascus_leucogenys
ENSCHIG00000022607	LRRC47	98	79.141	ENSODEG00000010882	LRRC47	93	79.592	Octodon_degus
ENSCHIG00000022607	LRRC47	95	56.989	ENSORLG00000002532	lrrc47	99	56.295	Oryzias_latipes
ENSCHIG00000022607	LRRC47	98	56.076	ENSORLG00020019601	lrrc47	99	56.272	Oryzias_latipes_hni
ENSCHIG00000022607	LRRC47	98	55.556	ENSORLG00015014040	lrrc47	99	55.749	Oryzias_latipes_hsok
ENSCHIG00000022607	LRRC47	98	55.903	ENSOMEG00000008989	lrrc47	99	55.268	Oryzias_melastigma
ENSCHIG00000022607	LRRC47	99	82.990	ENSOGAG00000001553	LRRC47	99	84.256	Otolemur_garnettii
ENSCHIG00000022607	LRRC47	98	95.804	ENSOARG00000015290	LRRC47	100	95.869	Ovis_aries
ENSCHIG00000022607	LRRC47	97	81.265	ENSPPAG00000036370	-	99	81.499	Pan_paniscus
ENSCHIG00000022607	LRRC47	98	85.889	ENSPPRG00000005261	LRRC47	99	85.128	Panthera_pardus
ENSCHIG00000022607	LRRC47	99	82.990	ENSPTRG00000000068	LRRC47	99	84.602	Pan_troglodytes
ENSCHIG00000022607	LRRC47	99	83.505	ENSPANG00000012437	LRRC47	99	84.775	Papio_anubis
ENSCHIG00000022607	LRRC47	65	66.230	ENSPSIG00000004196	LRRC47	100	65.183	Pelodiscus_sinensis
ENSCHIG00000022607	LRRC47	65	77.128	ENSPEMG00000021068	Lrrc47	100	76.596	Peromyscus_maniculatus_bairdii
ENSCHIG00000022607	LRRC47	98	75.175	ENSPCIG00000003638	LRRC47	100	75.726	Phascolarctos_cinereus
ENSCHIG00000022607	LRRC47	94	55.596	ENSPFOG00000000992	lrrc47	94	55.720	Poecilia_formosa
ENSCHIG00000022607	LRRC47	99	55.826	ENSPLAG00000008077	lrrc47	99	55.944	Poecilia_latipinna
ENSCHIG00000022607	LRRC47	99	55.882	ENSPMEG00000007367	lrrc47	99	56.000	Poecilia_mexicana
ENSCHIG00000022607	LRRC47	99	82.818	ENSPPYG00000001960	LRRC47	99	84.429	Pongo_abelii
ENSCHIG00000022607	LRRC47	98	83.798	ENSPCOG00000019161	LRRC47	100	84.444	Propithecus_coquereli
ENSCHIG00000022607	LRRC47	99	85.763	ENSPVAG00000009839	LRRC47	99	86.356	Pteropus_vampyrus
ENSCHIG00000022607	LRRC47	99	53.082	ENSPNAG00000017982	lrrc47	99	52.397	Pygocentrus_nattereri
ENSCHIG00000022607	LRRC47	99	80.723	ENSRNOG00000024796	Lrrc47	100	82.504	Rattus_norvegicus
ENSCHIG00000022607	LRRC47	99	84.021	ENSRBIG00000019437	LRRC47	99	85.294	Rhinopithecus_bieti
ENSCHIG00000022607	LRRC47	99	84.021	ENSRROG00000043182	LRRC47	99	85.294	Rhinopithecus_roxellana
ENSCHIG00000022607	LRRC47	91	80.252	ENSSBOG00000026334	LRRC47	97	80.462	Saimiri_boliviensis_boliviensis
ENSCHIG00000022607	LRRC47	98	61.446	ENSSHAG00000007360	LRRC47	99	61.720	Sarcophilus_harrisii
ENSCHIG00000022607	LRRC47	98	55.478	ENSSMAG00000009344	lrrc47	99	55.497	Scophthalmus_maximus
ENSCHIG00000022607	LRRC47	98	53.217	ENSSDUG00000014618	lrrc47	99	53.752	Seriola_dumerili
ENSCHIG00000022607	LRRC47	98	54.087	ENSSLDG00000018908	lrrc47	99	54.101	Seriola_lalandi_dorsalis
ENSCHIG00000022607	LRRC47	98	61.026	ENSSPUG00000010277	LRRC47	99	61.616	Sphenodon_punctatus
ENSCHIG00000022607	LRRC47	98	55.304	ENSSPAG00000005188	lrrc47	99	55.323	Stegastes_partitus
ENSCHIG00000022607	LRRC47	99	88.488	ENSSSCG00000039516	LRRC47	100	89.194	Sus_scrofa
ENSCHIG00000022607	LRRC47	70	65.025	ENSTGUG00000002737	LRRC47	99	64.039	Taeniopygia_guttata
ENSCHIG00000022607	LRRC47	98	53.860	ENSTRUG00000017696	lrrc47	99	53.333	Takifugu_rubripes
ENSCHIG00000022607	LRRC47	98	52.962	ENSTNIG00000010923	lrrc47	99	52.513	Tetraodon_nigroviridis
ENSCHIG00000022607	LRRC47	99	89.519	ENSTTRG00000011751	LRRC47	99	90.657	Tursiops_truncatus
ENSCHIG00000022607	LRRC47	88	84.600	ENSUAMG00000012080	LRRC47	97	84.600	Ursus_americanus
ENSCHIG00000022607	LRRC47	65	80.052	ENSUMAG00000010781	LRRC47	81	80.052	Ursus_maritimus
ENSCHIG00000022607	LRRC47	100	77.458	ENSVVUG00000027118	LRRC47	94	80.072	Vulpes_vulpes
ENSCHIG00000022607	LRRC47	99	58.247	ENSXETG00000006029	lrrc47	99	58.966	Xenopus_tropicalis
ENSCHIG00000022607	LRRC47	98	56.042	ENSXCOG00000002813	lrrc47	98	55.867	Xiphophorus_couchianus
ENSCHIG00000022607	LRRC47	98	55.965	ENSXMAG00000019386	lrrc47	99	55.789	Xiphophorus_maculatus