EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000022624 (Gene tree)
Gene ID: 102168777
Gene Symbol: -
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 5770 bases
Position: chr2:109750471-109756240
Accession: 102168777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000026177	RRM_1	PF00076.22	1.6e-14	1	1
ENSCHIP00000026177	RRM_3	PF08777.11	4.6e-31	1	1
ENSCHIP00000026177	La	PF05383.17	7.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000034039	-	1218	XM_005675984	ENSCHIP00000026177	405 (aa)	XP_005676041	UPI0003AF82DC

Gene Model

Click here to download ENSCHIG00000022624's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000022624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000022624	-	100	93.580	ENSCHIG00000022196	-	100	93.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000022624	-	100	93.627	ENSG00000138385	SSB	100	98.370	Homo_sapiens
ENSCHIG00000022624	-	98	54.975	ENSAPOG00000003448	ssb	100	55.419	Acanthochromis_polyacanthus
ENSCHIG00000022624	-	100	91.667	ENSAMEG00000010507	SSB	100	91.667	Ailuropoda_melanoleuca
ENSCHIG00000022624	-	92	58.289	ENSACIG00000001738	ssb	97	58.289	Amphilophus_citrinellus
ENSCHIG00000022624	-	98	55.224	ENSAOCG00000020398	ssb	100	55.911	Amphiprion_ocellaris
ENSCHIG00000022624	-	98	55.473	ENSAPEG00000020395	ssb	100	56.158	Amphiprion_percula
ENSCHIG00000022624	-	99	57.143	ENSATEG00000016884	ssb	100	57.635	Anabas_testudineus
ENSCHIG00000022624	-	100	71.226	ENSAPLG00000006109	SSB	100	72.706	Anas_platyrhynchos
ENSCHIG00000022624	-	100	67.073	ENSACAG00000017008	SSB	99	67.073	Anolis_carolinensis
ENSCHIG00000022624	-	100	84.691	ENSANAG00000027195	-	100	84.691	Aotus_nancymaae
ENSCHIG00000022624	-	99	54.703	ENSACLG00000010798	ssb	100	54.455	Astatotilapia_calliptera
ENSCHIG00000022624	-	98	54.902	ENSAMXG00000012606	ssb	100	56.039	Astyanax_mexicanus
ENSCHIG00000022624	-	100	98.272	ENSBTAG00000008716	SSB	100	98.272	Bos_taurus
ENSCHIG00000022624	-	73	35.430	WBGene00016653	C44E4.4	85	33.333	Caenorhabditis_elegans
ENSCHIG00000022624	-	100	93.333	ENSCJAG00000045073	SSB	100	93.333	Callithrix_jacchus
ENSCHIG00000022624	-	100	94.581	ENSCAFG00000012418	SSB	100	94.581	Canis_familiaris
ENSCHIG00000022624	-	100	94.581	ENSCAFG00020002900	SSB	100	94.581	Canis_lupus_dingo
ENSCHIG00000022624	-	100	94.568	ENSTSYG00000000097	SSB	100	94.568	Carlito_syrichta
ENSCHIG00000022624	-	100	95.309	ENSCPOG00000003338	SSB	100	95.309	Cavia_porcellus
ENSCHIG00000022624	-	100	93.827	ENSCCAG00000035147	SSB	100	93.827	Cebus_capucinus
ENSCHIG00000022624	-	100	71.852	ENSCATG00000036701	SSB	100	71.852	Cercocebus_atys
ENSCHIG00000022624	-	100	70.123	ENSCATG00000042909	-	100	70.123	Cercocebus_atys
ENSCHIG00000022624	-	100	95.062	ENSCLAG00000015617	-	100	95.062	Chinchilla_lanigera
ENSCHIG00000022624	-	100	93.827	ENSCSAG00000015200	SSB	89	93.827	Chlorocebus_sabaeus
ENSCHIG00000022624	-	98	85.139	ENSCSAG00000018390	-	100	85.139	Chlorocebus_sabaeus
ENSCHIG00000022624	-	100	94.321	ENSCHOG00000007763	SSB	100	94.321	Choloepus_hoffmanni
ENSCHIG00000022624	-	100	78.240	ENSCPBG00000006519	SSB	100	78.973	Chrysemys_picta_bellii
ENSCHIG00000022624	-	100	94.321	ENSCANG00000027695	SSB	100	94.321	Colobus_angolensis_palliatus
ENSCHIG00000022624	-	98	73.935	ENSCANG00000028838	-	95	73.935	Colobus_angolensis_palliatus
ENSCHIG00000022624	-	100	79.753	ENSCANG00000033240	-	100	79.753	Colobus_angolensis_palliatus
ENSCHIG00000022624	-	100	78.293	ENSCGRG00001024831	Ssb	100	79.512	Cricetulus_griseus_chok1gshd
ENSCHIG00000022624	-	100	78.293	ENSCGRG00000005387	Ssb	100	79.512	Cricetulus_griseus_crigri
ENSCHIG00000022624	-	98	57.250	ENSCSEG00000011599	ssb	99	58.000	Cynoglossus_semilaevis
ENSCHIG00000022624	-	99	57.494	ENSCVAG00000021558	ssb	100	57.985	Cyprinodon_variegatus
ENSCHIG00000022624	-	98	58.209	ENSDARG00000029252	ssb	99	58.209	Danio_rerio
ENSCHIG00000022624	-	100	94.074	ENSDNOG00000013450	SSB	100	94.074	Dasypus_novemcinctus
ENSCHIG00000022624	-	100	83.698	ENSDORG00000005543	Ssb	100	83.698	Dipodomys_ordii
ENSCHIG00000022624	-	84	34.384	FBgn0011638	La	92	33.780	Drosophila_melanogaster
ENSCHIG00000022624	-	58	92.537	ENSETEG00000004614	-	61	92.537	Echinops_telfairi
ENSCHIG00000022624	-	96	47.959	ENSEBUG00000001237	ssb	96	48.214	Eptatretus_burgeri
ENSCHIG00000022624	-	100	96.296	ENSEASG00005022835	SSB	100	96.296	Equus_asinus_asinus
ENSCHIG00000022624	-	100	96.543	ENSECAG00000018495	SSB	100	96.543	Equus_caballus
ENSCHIG00000022624	-	82	85.185	ENSEEUG00000008077	SSB	86	85.185	Erinaceus_europaeus
ENSCHIG00000022624	-	98	59.305	ENSELUG00000020929	ssb	100	59.804	Esox_lucius
ENSCHIG00000022624	-	100	94.581	ENSFCAG00000011601	SSB	100	94.581	Felis_catus
ENSCHIG00000022624	-	100	75.921	ENSFALG00000000930	SSB	100	75.921	Ficedula_albicollis
ENSCHIG00000022624	-	100	94.568	ENSFDAG00000000598	SSB	100	94.568	Fukomys_damarensis
ENSCHIG00000022624	-	72	54.849	ENSFHEG00000003268	ssb	94	55.410	Fundulus_heteroclitus
ENSCHIG00000022624	-	97	55.087	ENSGMOG00000002664	ssb	99	55.831	Gadus_morhua
ENSCHIG00000022624	-	100	75.245	ENSGALG00000009677	SSB	100	75.245	Gallus_gallus
ENSCHIG00000022624	-	99	55.911	ENSGAFG00000002749	ssb	100	56.158	Gambusia_affinis
ENSCHIG00000022624	-	99	54.612	ENSGACG00000005107	ssb	100	54.964	Gasterosteus_aculeatus
ENSCHIG00000022624	-	100	77.995	ENSGAGG00000007807	SSB	100	78.240	Gopherus_agassizii
ENSCHIG00000022624	-	100	77.778	ENSGGOG00000024891	-	100	77.778	Gorilla_gorilla
ENSCHIG00000022624	-	63	88.889	ENSGGOG00000023471	-	100	88.889	Gorilla_gorilla
ENSCHIG00000022624	-	99	54.208	ENSHBUG00000006584	ssb	100	53.960	Haplochromis_burtoni
ENSCHIG00000022624	-	100	86.241	ENSHGLG00000004478	-	100	86.241	Heterocephalus_glaber_female
ENSCHIG00000022624	-	100	86.173	ENSHGLG00000005832	-	100	86.173	Heterocephalus_glaber_female
ENSCHIG00000022624	-	100	93.447	ENSHGLG00000017580	-	100	93.447	Heterocephalus_glaber_female
ENSCHIG00000022624	-	100	93.447	ENSHGLG00100003084	-	100	93.447	Heterocephalus_glaber_male
ENSCHIG00000022624	-	100	81.975	ENSHGLG00100008767	-	100	81.975	Heterocephalus_glaber_male
ENSCHIG00000022624	-	98	55.164	ENSHCOG00000019011	ssb	99	55.416	Hippocampus_comes
ENSCHIG00000022624	-	97	58.209	ENSIPUG00000003681	SSB	99	58.663	Ictalurus_punctatus
ENSCHIG00000022624	-	100	95.062	ENSSTOG00000008416	SSB	100	95.062	Ictidomys_tridecemlineatus
ENSCHIG00000022624	-	99	67.910	ENSJJAG00000016250	-	99	67.910	Jaculus_jaculus
ENSCHIG00000022624	-	100	79.433	ENSJJAG00000023158	-	100	79.433	Jaculus_jaculus
ENSCHIG00000022624	-	99	56.158	ENSKMAG00000017317	ssb	100	56.650	Kryptolebias_marmoratus
ENSCHIG00000022624	-	98	54.726	ENSLBEG00000017345	ssb	100	55.665	Labrus_bergylta
ENSCHIG00000022624	-	99	66.339	ENSLACG00000014056	SSB	99	69.682	Latimeria_chalumnae
ENSCHIG00000022624	-	98	67.332	ENSLOCG00000007933	ssb	99	67.830	Lepisosteus_oculatus
ENSCHIG00000022624	-	75	69.868	ENSLAFG00000026721	-	99	69.868	Loxodonta_africana
ENSCHIG00000022624	-	100	79.012	ENSLAFG00000028909	-	100	79.012	Loxodonta_africana
ENSCHIG00000022624	-	100	87.204	ENSLAFG00000000867	-	100	88.626	Loxodonta_africana
ENSCHIG00000022624	-	100	94.074	ENSMFAG00000039066	SSB	100	94.074	Macaca_fascicularis
ENSCHIG00000022624	-	88	80.952	ENSMFAG00000041478	-	100	80.952	Macaca_fascicularis
ENSCHIG00000022624	-	100	79.506	ENSMMUG00000011724	-	97	79.506	Macaca_mulatta
ENSCHIG00000022624	-	99	66.005	ENSMMUG00000039889	-	100	66.253	Macaca_mulatta
ENSCHIG00000022624	-	100	94.074	ENSMMUG00000023051	SSB	100	94.074	Macaca_mulatta
ENSCHIG00000022624	-	88	80.952	ENSMNEG00000034698	-	100	80.952	Macaca_nemestrina
ENSCHIG00000022624	-	100	80.976	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSCHIG00000022624	-	100	94.074	ENSMLEG00000035717	SSB	100	94.074	Mandrillus_leucophaeus
ENSCHIG00000022624	-	100	67.654	ENSMLEG00000042644	-	100	67.654	Mandrillus_leucophaeus
ENSCHIG00000022624	-	99	58.128	ENSMAMG00000004800	ssb	100	58.621	Mastacembelus_armatus
ENSCHIG00000022624	-	99	54.703	ENSMZEG00005005749	ssb	100	54.455	Maylandia_zebra
ENSCHIG00000022624	-	100	75.245	ENSMGAG00000010328	SSB	99	76.585	Meleagris_gallopavo
ENSCHIG00000022624	-	99	95.037	ENSMICG00000028252	-	99	95.037	Microcebus_murinus
ENSCHIG00000022624	-	98	86.650	ENSMICG00000033304	-	98	86.856	Microcebus_murinus
ENSCHIG00000022624	-	100	53.285	ENSMODG00000019271	-	100	53.041	Monodelphis_domestica
ENSCHIG00000022624	-	85	80.503	ENSMODG00000007027	-	99	80.503	Monodelphis_domestica
ENSCHIG00000022624	-	100	78.072	ENSMODG00000008227	-	100	78.795	Monodelphis_domestica
ENSCHIG00000022624	-	90	58.583	ENSMALG00000008045	ssb	90	59.151	Monopterus_albus
ENSCHIG00000022624	-	100	76.960	MGP_CAROLIEiJ_G0023629	-	100	92.391	Mus_caroli
ENSCHIG00000022624	-	100	76.247	ENSMUSG00000068882	Ssb	100	92.391	Mus_musculus
ENSCHIG00000022624	-	100	76.010	MGP_PahariEiJ_G0025081	-	100	92.391	Mus_pahari
ENSCHIG00000022624	-	100	76.247	MGP_SPRETEiJ_G0024551	Ssb	100	92.391	Mus_spretus
ENSCHIG00000022624	-	100	95.556	ENSMPUG00000000785	SSB	100	95.556	Mustela_putorius_furo
ENSCHIG00000022624	-	100	89.286	ENSMLUG00000016316	SSB	100	89.286	Myotis_lucifugus
ENSCHIG00000022624	-	99	55.446	ENSNBRG00000012661	ssb	100	55.198	Neolamprologus_brichardi
ENSCHIG00000022624	-	100	94.321	ENSNLEG00000004958	SSB	100	94.321	Nomascus_leucogenys
ENSCHIG00000022624	-	100	67.488	ENSNLEG00000028754	-	100	67.980	Nomascus_leucogenys
ENSCHIG00000022624	-	61	87.097	ENSMEUG00000001650	-	100	87.097	Notamacropus_eugenii
ENSCHIG00000022624	-	72	68.966	ENSOPRG00000008475	-	100	72.759	Ochotona_princeps
ENSCHIG00000022624	-	93	88.624	ENSODEG00000004202	-	100	88.624	Octodon_degus
ENSCHIG00000022624	-	99	54.703	ENSONIG00000008776	ssb	100	54.455	Oreochromis_niloticus
ENSCHIG00000022624	-	100	83.210	ENSOANG00000008543	SSB	100	83.210	Ornithorhynchus_anatinus
ENSCHIG00000022624	-	100	94.074	ENSOCUG00000010396	SSB	100	94.074	Oryctolagus_cuniculus
ENSCHIG00000022624	-	99	57.635	ENSORLG00000017208	ssb	100	57.882	Oryzias_latipes
ENSCHIG00000022624	-	99	57.635	ENSORLG00020022574	ssb	100	57.882	Oryzias_latipes_hni
ENSCHIG00000022624	-	99	57.143	ENSORLG00015016592	ssb	100	57.389	Oryzias_latipes_hsok
ENSCHIG00000022624	-	98	58.105	ENSOMEG00000003193	ssb	100	59.012	Oryzias_melastigma
ENSCHIG00000022624	-	100	88.626	ENSOGAG00000029768	SSB	100	88.626	Otolemur_garnettii
ENSCHIG00000022624	-	100	99.506	ENSOARG00000002906	SSB	100	99.506	Ovis_aries
ENSCHIG00000022624	-	100	77.284	ENSPPAG00000032427	-	100	86.822	Pan_paniscus
ENSCHIG00000022624	-	100	93.627	ENSPPAG00000042673	SSB	100	93.627	Pan_paniscus
ENSCHIG00000022624	-	97	72.843	ENSPPAG00000006189	-	96	76.613	Pan_paniscus
ENSCHIG00000022624	-	100	94.581	ENSPPRG00000006599	SSB	100	94.581	Panthera_pardus
ENSCHIG00000022624	-	100	94.335	ENSPTIG00000011021	SSB	97	94.335	Panthera_tigris_altaica
ENSCHIG00000022624	-	100	73.333	ENSPTRG00000042880	-	100	73.333	Pan_troglodytes
ENSCHIG00000022624	-	100	93.627	ENSPTRG00000012620	SSB	100	93.627	Pan_troglodytes
ENSCHIG00000022624	-	100	67.407	ENSPANG00000034126	-	100	67.901	Papio_anubis
ENSCHIG00000022624	-	98	65.664	ENSPANG00000031877	-	95	65.664	Papio_anubis
ENSCHIG00000022624	-	100	94.074	ENSPANG00000007440	SSB	100	94.074	Papio_anubis
ENSCHIG00000022624	-	99	61.975	ENSPKIG00000019325	ssb	99	62.716	Paramormyrops_kingsleyae
ENSCHIG00000022624	-	100	76.284	ENSPSIG00000002265	SSB	93	76.528	Pelodiscus_sinensis
ENSCHIG00000022624	-	85	54.131	ENSPMGG00000020075	ssb	93	54.416	Periophthalmus_magnuspinnatus
ENSCHIG00000022624	-	81	49.394	ENSPMAG00000002982	ssb	100	45.476	Petromyzon_marinus
ENSCHIG00000022624	-	100	83.005	ENSPCIG00000028591	-	100	83.251	Phascolarctos_cinereus
ENSCHIG00000022624	-	99	56.897	ENSPFOG00000009650	ssb	100	57.143	Poecilia_formosa
ENSCHIG00000022624	-	99	56.650	ENSPLAG00000020498	ssb	100	56.897	Poecilia_latipinna
ENSCHIG00000022624	-	99	56.404	ENSPMEG00000001051	ssb	100	56.897	Poecilia_mexicana
ENSCHIG00000022624	-	94	57.552	ENSPREG00000003708	ssb	99	57.812	Poecilia_reticulata
ENSCHIG00000022624	-	100	94.321	ENSPPYG00000012919	SSB	100	94.321	Pongo_abelii
ENSCHIG00000022624	-	95	88.773	ENSPCAG00000010276	SSB	100	88.773	Procavia_capensis
ENSCHIG00000022624	-	100	91.358	ENSPCOG00000015741	-	100	91.358	Propithecus_coquereli
ENSCHIG00000022624	-	100	83.210	ENSPCOG00000023189	-	100	83.210	Propithecus_coquereli
ENSCHIG00000022624	-	87	95.480	ENSPVAG00000006615	SSB	100	95.480	Pteropus_vampyrus
ENSCHIG00000022624	-	99	54.703	ENSPNYG00000006444	ssb	100	54.455	Pundamilia_nyererei
ENSCHIG00000022624	-	98	56.650	ENSPNAG00000011708	ssb	100	57.767	Pygocentrus_nattereri
ENSCHIG00000022624	-	100	77.672	ENSRNOG00000007998	Ssb	100	77.672	Rattus_norvegicus
ENSCHIG00000022624	-	100	78.186	ENSRNOG00000011606	AABR07061825.1	100	78.186	Rattus_norvegicus
ENSCHIG00000022624	-	100	68.227	ENSRBIG00000029918	-	100	68.227	Rhinopithecus_bieti
ENSCHIG00000022624	-	100	78.537	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSCHIG00000022624	-	89	85.912	ENSRBIG00000041608	-	98	85.912	Rhinopithecus_bieti
ENSCHIG00000022624	-	94	78.100	ENSRBIG00000041232	-	98	78.100	Rhinopithecus_bieti
ENSCHIG00000022624	-	100	94.321	ENSRROG00000040346	SSB	100	94.321	Rhinopithecus_roxellana
ENSCHIG00000022624	-	100	78.079	ENSRROG00000007149	-	100	78.079	Rhinopithecus_roxellana
ENSCHIG00000022624	-	98	84.500	ENSRROG00000034102	-	98	84.422	Rhinopithecus_roxellana
ENSCHIG00000022624	-	98	79.293	ENSRROG00000031684	-	100	79.293	Rhinopithecus_roxellana
ENSCHIG00000022624	-	100	94.321	ENSSBOG00000027204	SSB	100	94.321	Saimiri_boliviensis_boliviensis
ENSCHIG00000022624	-	100	81.034	ENSSHAG00000018062	SSB	100	83.498	Sarcophilus_harrisii
ENSCHIG00000022624	-	99	64.146	ENSSFOG00015000550	ssb	100	64.634	Scleropages_formosus
ENSCHIG00000022624	-	98	53.885	ENSSMAG00000013885	ssb	99	57.487	Scophthalmus_maximus
ENSCHIG00000022624	-	99	57.143	ENSSDUG00000020117	ssb	100	57.389	Seriola_dumerili
ENSCHIG00000022624	-	99	55.087	ENSSLDG00000002525	ssb	100	55.087	Seriola_lalandi_dorsalis
ENSCHIG00000022624	-	95	85.640	ENSSARG00000007747	SSB	100	85.640	Sorex_araneus
ENSCHIG00000022624	-	100	76.413	ENSSPUG00000012112	SSB	100	76.413	Sphenodon_punctatus
ENSCHIG00000022624	-	98	55.970	ENSSPAG00000005696	ssb	100	56.650	Stegastes_partitus
ENSCHIG00000022624	-	96	78.553	ENSSSCG00000015938	SSB	96	79.381	Sus_scrofa
ENSCHIG00000022624	-	100	75.061	ENSTGUG00000007942	SSB	100	75.061	Taeniopygia_guttata
ENSCHIG00000022624	-	99	56.931	ENSTRUG00000017839	ssb	100	57.531	Takifugu_rubripes
ENSCHIG00000022624	-	90	59.511	ENSTNIG00000000915	ssb	100	59.511	Tetraodon_nigroviridis
ENSCHIG00000022624	-	83	100.000	ENSTBEG00000009056	SSB	82	100.000	Tupaia_belangeri
ENSCHIG00000022624	-	100	95.074	ENSTTRG00000002152	SSB	100	95.074	Tursiops_truncatus
ENSCHIG00000022624	-	93	95.756	ENSUAMG00000027833	SSB	99	95.756	Ursus_americanus
ENSCHIG00000022624	-	100	95.074	ENSUMAG00000013907	SSB	100	95.074	Ursus_maritimus
ENSCHIG00000022624	-	100	94.815	ENSVPAG00000007183	SSB	100	94.815	Vicugna_pacos
ENSCHIG00000022624	-	100	94.581	ENSVVUG00000016573	SSB	78	94.581	Vulpes_vulpes
ENSCHIG00000022624	-	92	63.342	ENSXETG00000025402	ssb	87	65.323	Xenopus_tropicalis
ENSCHIG00000022624	-	94	55.091	ENSXCOG00000019109	ssb	99	55.352	Xiphophorus_couchianus
ENSCHIG00000022624	-	99	55.911	ENSXMAG00000004888	ssb	100	56.158	Xiphophorus_maculatus