EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000022681 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1138 bases
Position: chr26:16834104-16835241
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000026268	FDF	PF09532.10	2.7e-20	1	1
ENSCHIP00000026268	LSM14	PF12701.7	7.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000034131	-	1086	-	ENSCHIP00000026268	361 (aa)	-	UPI000D190500

Gene Model

Click here to download ENSCHIG00000022681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000022681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000022681	-	100	72.368	ENSCHIG00000010284	-	99	72.368
ENSCHIG00000022681	-	91	40.049	ENSCHIG00000009458	LSM14A	91	39.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000022681	-	100	69.474	ENSG00000149657	LSM14B	99	69.474	Homo_sapiens
ENSCHIG00000022681	-	60	33.028	ENSAPOG00000010003	-	64	43.636	Acanthochromis_polyacanthus
ENSCHIG00000022681	-	90	41.484	ENSAPOG00000001780	lsm14b	94	41.732	Acanthochromis_polyacanthus
ENSCHIG00000022681	-	100	61.758	ENSAMEG00000013430	LSM14B	99	61.758	Ailuropoda_melanoleuca
ENSCHIG00000022681	-	61	35.556	ENSACIG00000003147	LSM14B	99	36.145	Amphilophus_citrinellus
ENSCHIG00000022681	-	90	40.058	ENSACIG00000012266	lsm14b	99	37.984	Amphilophus_citrinellus
ENSCHIG00000022681	-	90	42.618	ENSAOCG00000012380	lsm14b	94	42.819	Amphiprion_ocellaris
ENSCHIG00000022681	-	97	40.051	ENSAOCG00000006667	LSM14B	97	40.051	Amphiprion_ocellaris
ENSCHIG00000022681	-	90	39.888	ENSAPEG00000023633	lsm14b	94	41.096	Amphiprion_percula
ENSCHIG00000022681	-	90	41.477	ENSATEG00000016603	lsm14b	94	42.049	Anabas_testudineus
ENSCHIG00000022681	-	92	56.633	ENSAPLG00000013203	LSM14B	100	56.378	Anas_platyrhynchos
ENSCHIG00000022681	-	100	60.052	ENSACAG00000016195	LSM14B	99	60.052	Anolis_carolinensis
ENSCHIG00000022681	-	100	67.632	ENSANAG00000037915	LSM14B	99	67.632	Aotus_nancymaae
ENSCHIG00000022681	-	90	38.122	ENSACLG00000019663	lsm14b	99	38.710	Astatotilapia_calliptera
ENSCHIG00000022681	-	90	46.849	ENSAMXG00000002865	lsm14b	99	46.402	Astyanax_mexicanus
ENSCHIG00000022681	-	100	65.394	ENSBTAG00000021558	LSM14B	99	65.394	Bos_taurus
ENSCHIG00000022681	-	100	68.158	ENSCJAG00000014434	LSM14B	99	68.158	Callithrix_jacchus
ENSCHIG00000022681	-	90	61.979	ENSCAFG00000012518	LSM14B	98	61.979	Canis_familiaris
ENSCHIG00000022681	-	100	68.684	ENSCAFG00020022150	LSM14B	99	68.684	Canis_lupus_dingo
ENSCHIG00000022681	-	89	67.836	ENSTSYG00000031914	LSM14B	89	68.421	Carlito_syrichta
ENSCHIG00000022681	-	90	69.096	ENSCAPG00000013059	LSM14B	100	69.096	Cavia_aperea
ENSCHIG00000022681	-	89	69.298	ENSCPOG00000038080	LSM14B	100	69.298	Cavia_porcellus
ENSCHIG00000022681	-	98	54.891	ENSCCAG00000024900	-	89	60.741	Cebus_capucinus
ENSCHIG00000022681	-	100	67.632	ENSCCAG00000021267	LSM14B	99	67.632	Cebus_capucinus
ENSCHIG00000022681	-	100	68.947	ENSCATG00000036006	LSM14B	99	68.947	Cercocebus_atys
ENSCHIG00000022681	-	89	67.836	ENSCLAG00000003186	LSM14B	100	67.836	Chinchilla_lanigera
ENSCHIG00000022681	-	100	62.768	ENSCSAG00000015729	LSM14B	99	62.768	Chlorocebus_sabaeus
ENSCHIG00000022681	-	100	55.370	ENSCPBG00000027065	LSM14B	99	55.819	Chrysemys_picta_bellii
ENSCHIG00000022681	-	89	69.006	ENSCANG00000036986	LSM14B	100	69.006	Colobus_angolensis_palliatus
ENSCHIG00000022681	-	100	67.632	ENSCGRG00001018399	Lsm14b	99	67.895	Cricetulus_griseus_chok1gshd
ENSCHIG00000022681	-	62	70.763	ENSCGRG00000006111	-	94	63.929	Cricetulus_griseus_crigri
ENSCHIG00000022681	-	64	70.130	ENSCGRG00000002484	-	100	68.398	Cricetulus_griseus_crigri
ENSCHIG00000022681	-	96	38.760	ENSCSEG00000020669	LSM14B	96	39.018	Cynoglossus_semilaevis
ENSCHIG00000022681	-	90	40.496	ENSCSEG00000004722	lsm14b	99	39.599	Cynoglossus_semilaevis
ENSCHIG00000022681	-	64	33.051	ENSCVAG00000012433	-	93	31.356	Cyprinodon_variegatus
ENSCHIG00000022681	-	91	46.724	ENSDARG00000025386	lsm14b	99	46.997	Danio_rerio
ENSCHIG00000022681	-	64	69.959	ENSDNOG00000025246	LSM14B	94	63.066	Dasypus_novemcinctus
ENSCHIG00000022681	-	90	66.087	ENSDORG00000016683	Lsm14b	90	64.982	Dipodomys_ordii
ENSCHIG00000022681	-	98	56.614	ENSETEG00000001869	-	97	55.291	Echinops_telfairi
ENSCHIG00000022681	-	55	64.762	ENSETEG00000011188	-	91	64.762	Echinops_telfairi
ENSCHIG00000022681	-	70	70.635	ENSEASG00005023218	LSM14B	99	69.048	Equus_asinus_asinus
ENSCHIG00000022681	-	100	70.000	ENSECAG00000010659	LSM14B	99	70.000	Equus_caballus
ENSCHIG00000022681	-	57	85.217	ENSEEUG00000007331	LSM14B	75	85.217	Erinaceus_europaeus
ENSCHIG00000022681	-	96	45.040	ENSELUG00000005780	lsm14b	96	46.032	Esox_lucius
ENSCHIG00000022681	-	90	41.737	ENSELUG00000016299	LSM14B	99	41.191	Esox_lucius
ENSCHIG00000022681	-	100	69.211	ENSFCAG00000003248	LSM14B	99	69.211	Felis_catus
ENSCHIG00000022681	-	90	57.881	ENSFALG00000010618	LSM14B	100	57.623	Ficedula_albicollis
ENSCHIG00000022681	-	89	68.421	ENSFDAG00000002214	LSM14B	100	68.421	Fukomys_damarensis
ENSCHIG00000022681	-	72	33.645	ENSFHEG00000003362	LSM14B	78	33.851	Fundulus_heteroclitus
ENSCHIG00000022681	-	91	41.989	ENSFHEG00000006237	lsm14b	99	41.013	Fundulus_heteroclitus
ENSCHIG00000022681	-	100	39.142	ENSGMOG00000017115	lsm14b	98	38.965	Gadus_morhua
ENSCHIG00000022681	-	100	62.176	ENSGALG00000005125	LSM14B	99	63.731	Gallus_gallus
ENSCHIG00000022681	-	64	35.931	ENSGAFG00000013723	LSM14B	92	35.498	Gambusia_affinis
ENSCHIG00000022681	-	90	33.518	ENSGAFG00000020318	lsm14b	62	60.417	Gambusia_affinis
ENSCHIG00000022681	-	91	42.776	ENSGACG00000009973	lsm14b	97	42.133	Gasterosteus_aculeatus
ENSCHIG00000022681	-	64	62.551	ENSGAGG00000004106	LSM14B	94	62.140	Gopherus_agassizii
ENSCHIG00000022681	-	91	69.364	ENSGGOG00000005630	LSM14B	95	69.364	Gorilla_gorilla
ENSCHIG00000022681	-	100	68.158	ENSHGLG00000015055	LSM14B	99	68.158	Heterocephalus_glaber_female
ENSCHIG00000022681	-	89	68.529	ENSHGLG00100015273	LSM14B	100	68.529	Heterocephalus_glaber_male
ENSCHIG00000022681	-	95	42.742	ENSHCOG00000018747	LSM14B	94	43.132	Hippocampus_comes
ENSCHIG00000022681	-	60	38.710	ENSHCOG00000004867	lsm14b	91	39.316	Hippocampus_comes
ENSCHIG00000022681	-	90	48.442	ENSIPUG00000014946	lsm14b	94	47.059	Ictalurus_punctatus
ENSCHIG00000022681	-	89	69.298	ENSSTOG00000020482	LSM14B	100	69.298	Ictidomys_tridecemlineatus
ENSCHIG00000022681	-	100	67.895	ENSJJAG00000012728	Lsm14b	99	68.085	Jaculus_jaculus
ENSCHIG00000022681	-	52	40.000	ENSKMAG00000012834	-	100	38.912	Kryptolebias_marmoratus
ENSCHIG00000022681	-	90	41.226	ENSKMAG00000017524	lsm14b	93	40.533	Kryptolebias_marmoratus
ENSCHIG00000022681	-	100	59.559	ENSLACG00000003849	LSM14B	99	52.381	Latimeria_chalumnae
ENSCHIG00000022681	-	99	47.013	ENSLOCG00000003746	lsm14b	99	48.320	Lepisosteus_oculatus
ENSCHIG00000022681	-	91	65.029	ENSLAFG00000007492	LSM14B	100	65.029	Loxodonta_africana
ENSCHIG00000022681	-	100	69.474	ENSMFAG00000041479	LSM14B	99	69.474	Macaca_fascicularis
ENSCHIG00000022681	-	100	69.474	ENSMMUG00000014084	LSM14B	99	69.474	Macaca_mulatta
ENSCHIG00000022681	-	100	69.474	ENSMNEG00000045573	LSM14B	99	69.474	Macaca_nemestrina
ENSCHIG00000022681	-	89	69.298	ENSMLEG00000040895	LSM14B	100	69.298	Mandrillus_leucophaeus
ENSCHIG00000022681	-	97	41.053	ENSMAMG00000024124	LSM14B	97	41.053	Mastacembelus_armatus
ENSCHIG00000022681	-	90	38.655	ENSMAMG00000020539	lsm14b	98	39.231	Mastacembelus_armatus
ENSCHIG00000022681	-	90	37.466	ENSMZEG00005000987	lsm14b	99	38.119	Maylandia_zebra
ENSCHIG00000022681	-	91	37.741	ENSMZEG00005026001	LSM14B	95	38.753	Maylandia_zebra
ENSCHIG00000022681	-	92	60.112	ENSMGAG00000005300	LSM14B	100	61.798	Meleagris_gallopavo
ENSCHIG00000022681	-	100	67.368	ENSMAUG00000020700	Lsm14b	99	67.632	Mesocricetus_auratus
ENSCHIG00000022681	-	100	69.474	ENSMICG00000014675	LSM14B	99	69.474	Microcebus_murinus
ENSCHIG00000022681	-	100	67.105	ENSMOCG00000020600	Lsm14b	99	67.105	Microtus_ochrogaster
ENSCHIG00000022681	-	58	56.502	ENSMOCG00000005119	-	86	51.163	Microtus_ochrogaster
ENSCHIG00000022681	-	91	40.462	ENSMMOG00000017321	LSM14B	96	38.220	Mola_mola
ENSCHIG00000022681	-	90	41.292	ENSMMOG00000020042	lsm14b	97	40.053	Mola_mola
ENSCHIG00000022681	-	64	68.182	ENSMODG00000016690	LSM14B	94	61.433	Monodelphis_domestica
ENSCHIG00000022681	-	89	41.714	ENSMALG00000022251	LSM14B	97	40.874	Monopterus_albus
ENSCHIG00000022681	-	95	38.268	ENSMALG00000004783	lsm14b	95	38.187	Monopterus_albus
ENSCHIG00000022681	-	100	66.842	MGP_CAROLIEiJ_G0024770	Lsm14b	99	67.105	Mus_caroli
ENSCHIG00000022681	-	100	67.105	ENSMUSG00000039108	Lsm14b	99	67.368	Mus_musculus
ENSCHIG00000022681	-	100	67.105	MGP_PahariEiJ_G0026214	Lsm14b	99	67.368	Mus_pahari
ENSCHIG00000022681	-	100	67.105	MGP_SPRETEiJ_G0025693	Lsm14b	99	67.368	Mus_spretus
ENSCHIG00000022681	-	90	62.304	ENSMPUG00000007584	LSM14B	95	62.304	Mustela_putorius_furo
ENSCHIG00000022681	-	100	68.865	ENSMLUG00000000304	LSM14B	99	68.865	Myotis_lucifugus
ENSCHIG00000022681	-	60	71.861	ENSNGAG00000016550	Lsm14b	100	71.861	Nannospalax_galili
ENSCHIG00000022681	-	89	69.298	ENSNLEG00000015757	LSM14B	100	69.298	Nomascus_leucogenys
ENSCHIG00000022681	-	78	74.510	ENSMEUG00000008267	-	82	74.194	Notamacropus_eugenii
ENSCHIG00000022681	-	61	44.053	ENSMEUG00000006305	-	99	46.725	Notamacropus_eugenii
ENSCHIG00000022681	-	53	78.947	ENSOPRG00000000447	-	58	81.081	Ochotona_princeps
ENSCHIG00000022681	-	100	68.421	ENSODEG00000004099	LSM14B	99	68.421	Octodon_degus
ENSCHIG00000022681	-	90	37.602	ENSONIG00000020318	lsm14b	99	40.500	Oreochromis_niloticus
ENSCHIG00000022681	-	70	61.364	ENSOANG00000003370	LSM14B	97	59.108	Ornithorhynchus_anatinus
ENSCHIG00000022681	-	90	65.698	ENSOCUG00000006279	LSM14B	100	65.698	Oryctolagus_cuniculus
ENSCHIG00000022681	-	90	39.831	ENSORLG00000013525	lsm14b	93	42.350	Oryzias_latipes
ENSCHIG00000022681	-	90	38.310	ENSORLG00000028353	LSM14B	96	37.302	Oryzias_latipes
ENSCHIG00000022681	-	90	39.831	ENSORLG00020020553	lsm14b	93	42.350	Oryzias_latipes_hni
ENSCHIG00000022681	-	66	35.200	ENSORLG00020018191	-	96	35.165	Oryzias_latipes_hni
ENSCHIG00000022681	-	90	38.592	ENSORLG00015013157	LSM14B	96	37.302	Oryzias_latipes_hsok
ENSCHIG00000022681	-	90	39.831	ENSORLG00015016862	lsm14b	93	42.350	Oryzias_latipes_hsok
ENSCHIG00000022681	-	90	39.831	ENSOMEG00000023917	lsm14b	93	42.350	Oryzias_melastigma
ENSCHIG00000022681	-	65	34.746	ENSOMEG00000000171	-	96	36.066	Oryzias_melastigma
ENSCHIG00000022681	-	100	62.291	ENSOGAG00000003915	LSM14B	99	62.291	Otolemur_garnettii
ENSCHIG00000022681	-	90	65.969	ENSOARG00000014706	LSM14B	98	65.969	Ovis_aries
ENSCHIG00000022681	-	91	69.364	ENSPPAG00000035799	LSM14B	95	69.364	Pan_paniscus
ENSCHIG00000022681	-	100	69.474	ENSPPRG00000009197	LSM14B	99	69.474	Panthera_pardus
ENSCHIG00000022681	-	61	73.504	ENSPTIG00000021518	LSM14B	99	67.901	Panthera_tigris_altaica
ENSCHIG00000022681	-	100	69.474	ENSPTRG00000013696	LSM14B	99	69.474	Pan_troglodytes
ENSCHIG00000022681	-	100	69.211	ENSPANG00000011747	LSM14B	99	69.211	Papio_anubis
ENSCHIG00000022681	-	91	47.009	ENSPKIG00000003275	lsm14b	91	64.000	Paramormyrops_kingsleyae
ENSCHIG00000022681	-	90	61.561	ENSPSIG00000014762	LSM14B	100	61.561	Pelodiscus_sinensis
ENSCHIG00000022681	-	100	67.632	ENSPEMG00000017688	Lsm14b	99	67.895	Peromyscus_maniculatus_bairdii
ENSCHIG00000022681	-	100	64.644	ENSPCIG00000013405	LSM14B	99	64.644	Phascolarctos_cinereus
ENSCHIG00000022681	-	100	41.058	ENSPFOG00000005631	lsm14b	99	41.058	Poecilia_formosa
ENSCHIG00000022681	-	89	38.261	ENSPLAG00000005793	LSM14B	96	38.211	Poecilia_latipinna
ENSCHIG00000022681	-	100	40.409	ENSPLAG00000002449	lsm14b	99	40.759	Poecilia_latipinna
ENSCHIG00000022681	-	91	40.720	ENSPMEG00000000745	lsm14b	99	38.670	Poecilia_mexicana
ENSCHIG00000022681	-	89	38.682	ENSPMEG00000022953	LSM14B	96	38.482	Poecilia_mexicana
ENSCHIG00000022681	-	60	32.906	ENSPREG00000007828	LSM14B	92	33.071	Poecilia_reticulata
ENSCHIG00000022681	-	100	60.263	ENSPPYG00000011194	LSM14B	99	60.156	Pongo_abelii
ENSCHIG00000022681	-	100	69.211	ENSPCOG00000013625	LSM14B	99	69.211	Propithecus_coquereli
ENSCHIG00000022681	-	81	56.536	ENSPVAG00000017918	LSM14B	100	53.968	Pteropus_vampyrus
ENSCHIG00000022681	-	90	48.949	ENSPNAG00000012777	lsm14b	99	48.378	Pygocentrus_nattereri
ENSCHIG00000022681	-	100	60.382	ENSRNOG00000054557	Lsm14b	99	60.382	Rattus_norvegicus
ENSCHIG00000022681	-	90	68.805	ENSRBIG00000033461	LSM14B	99	68.805	Rhinopithecus_bieti
ENSCHIG00000022681	-	91	69.914	ENSRROG00000042949	LSM14B	91	69.914	Rhinopithecus_roxellana
ENSCHIG00000022681	-	89	68.129	ENSSBOG00000032820	LSM14B	100	68.129	Saimiri_boliviensis_boliviensis
ENSCHIG00000022681	-	90	64.638	ENSSHAG00000015528	LSM14B	96	64.638	Sarcophilus_harrisii
ENSCHIG00000022681	-	90	46.518	ENSSFOG00015004627	lsm14b	99	47.044	Scleropages_formosus
ENSCHIG00000022681	-	90	41.311	ENSSMAG00000012725	lsm14b	99	40.979	Scophthalmus_maximus
ENSCHIG00000022681	-	94	40.365	ENSSMAG00000000135	LSM14B	94	40.568	Scophthalmus_maximus
ENSCHIG00000022681	-	90	39.833	ENSSDUG00000020977	lsm14b	99	39.899	Seriola_dumerili
ENSCHIG00000022681	-	89	43.909	ENSSDUG00000022770	LSM14B	94	44.032	Seriola_dumerili
ENSCHIG00000022681	-	65	33.591	ENSSLDG00000011354	-	88	37.743	Seriola_lalandi_dorsalis
ENSCHIG00000022681	-	53	66.341	ENSSARG00000007749	-	99	66.341	Sorex_araneus
ENSCHIG00000022681	-	100	56.086	ENSSPUG00000014360	LSM14B	99	55.714	Sphenodon_punctatus
ENSCHIG00000022681	-	90	42.241	ENSSPAG00000020915	lsm14b	99	41.299	Stegastes_partitus
ENSCHIG00000022681	-	70	33.460	ENSSPAG00000018854	-	97	32.824	Stegastes_partitus
ENSCHIG00000022681	-	100	68.947	ENSSSCG00000026052	LSM14B	94	66.551	Sus_scrofa
ENSCHIG00000022681	-	90	63.793	ENSTGUG00000007884	LSM14B	100	63.793	Taeniopygia_guttata
ENSCHIG00000022681	-	100	38.107	ENSTRUG00000011354	lsm14b	99	38.107	Takifugu_rubripes
ENSCHIG00000022681	-	91	40.701	ENSTRUG00000001529	LSM14B	96	40.256	Takifugu_rubripes
ENSCHIG00000022681	-	91	42.286	ENSTNIG00000002445	lsm14b	94	41.989	Tetraodon_nigroviridis
ENSCHIG00000022681	-	53	83.660	ENSTTRG00000011043	LSM14B	50	83.226	Tursiops_truncatus
ENSCHIG00000022681	-	92	68.644	ENSUAMG00000025298	LSM14B	93	68.644	Ursus_americanus
ENSCHIG00000022681	-	92	68.644	ENSUMAG00000000480	LSM14B	93	68.644	Ursus_maritimus
ENSCHIG00000022681	-	90	68.116	ENSVVUG00000015920	LSM14B	98	68.116	Vulpes_vulpes
ENSCHIG00000022681	-	84	56.548	ENSXETG00000001997	lsm14b	99	57.440	Xenopus_tropicalis
ENSCHIG00000022681	-	90	39.503	ENSXMAG00000010013	lsm14b	99	39.702	Xiphophorus_maculatus