EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000022740 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 433 bases
Position: chr3:112485205-112485637
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000026373	Ribosomal_S18	PF01084.20	1.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000034236	-	375	-	ENSCHIP00000026373	124 (aa)	-	UPI000D18C339

Gene Model

Click here to download ENSCHIG00000022740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000022740's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000022740	-	71	61.111	ENSCHIG00000019359	-	98	61.111
ENSCHIG00000022740	-	94	80.882	ENSCHIG00000004461	-	95	80.882
ENSCHIG00000022740	-	100	62.903	ENSCHIG00000016551	-	100	62.903
ENSCHIG00000022740	-	98	63.504	ENSCHIG00000018805	-	99	63.504

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000022740	-	100	73.239	ENSG00000163319	MRPS18C	100	73.239	Homo_sapiens
ENSCHIG00000022740	-	100	70.922	ENSAMEG00000004915	MRPS18C	100	70.922	Ailuropoda_melanoleuca
ENSCHIG00000022740	-	100	59.722	ENSANAG00000028055	-	100	59.722	Aotus_nancymaae
ENSCHIG00000022740	-	99	60.741	ENSANAG00000025323	-	95	60.000	Aotus_nancymaae
ENSCHIG00000022740	-	100	66.935	ENSBTAG00000049836	-	100	66.935	Bos_taurus
ENSCHIG00000022740	-	100	81.818	ENSBTAG00000018155	MRPS18C	100	81.818	Bos_taurus
ENSCHIG00000022740	-	100	70.833	ENSCJAG00000042247	MRPS18C	97	70.833	Callithrix_jacchus
ENSCHIG00000022740	-	100	72.028	ENSCAFG00020010491	MRPS18C	100	72.028	Canis_lupus_dingo
ENSCHIG00000022740	-	100	71.329	ENSTSYG00000012924	MRPS18C	100	71.329	Carlito_syrichta
ENSCHIG00000022740	-	100	66.667	ENSCPOG00000009198	MRPS18C	100	66.667	Cavia_porcellus
ENSCHIG00000022740	-	100	68.148	ENSCCAG00000028283	-	100	68.148	Cebus_capucinus
ENSCHIG00000022740	-	99	64.885	ENSCCAG00000025155	-	95	64.885	Cebus_capucinus
ENSCHIG00000022740	-	100	71.528	ENSCCAG00000026577	-	100	71.528	Cebus_capucinus
ENSCHIG00000022740	-	100	70.833	ENSCCAG00000019347	-	100	70.833	Cebus_capucinus
ENSCHIG00000022740	-	100	72.917	ENSCATG00000040697	MRPS18C	100	72.917	Cercocebus_atys
ENSCHIG00000022740	-	100	68.056	ENSCLAG00000017397	-	100	68.056	Chinchilla_lanigera
ENSCHIG00000022740	-	100	67.123	ENSCLAG00000008205	-	100	67.123	Chinchilla_lanigera
ENSCHIG00000022740	-	100	72.917	ENSCANG00000038907	MRPS18C	100	72.917	Colobus_angolensis_palliatus
ENSCHIG00000022740	-	100	62.857	ENSCANG00000041165	-	100	62.857	Colobus_angolensis_palliatus
ENSCHIG00000022740	-	100	65.323	ENSCANG00000037347	-	100	65.323	Colobus_angolensis_palliatus
ENSCHIG00000022740	-	100	66.667	ENSCGRG00001000103	Mrps18c	100	66.667	Cricetulus_griseus_chok1gshd
ENSCHIG00000022740	-	100	66.667	ENSCGRG00000002192	Mrps18c	100	66.667	Cricetulus_griseus_crigri
ENSCHIG00000022740	-	98	66.197	ENSDORG00000012749	Mrps18c	100	66.197	Dipodomys_ordii
ENSCHIG00000022740	-	100	53.521	ENSETEG00000012223	-	100	53.521	Echinops_telfairi
ENSCHIG00000022740	-	100	77.273	ENSEASG00005013234	MRPS18C	100	77.273	Equus_asinus_asinus
ENSCHIG00000022740	-	100	77.273	ENSECAG00000020387	MRPS18C	100	77.273	Equus_caballus
ENSCHIG00000022740	-	100	53.846	ENSEEUG00000003504	MRPS18C	99	53.846	Erinaceus_europaeus
ENSCHIG00000022740	-	100	70.629	ENSFCAG00000042464	MRPS18C	100	70.629	Felis_catus
ENSCHIG00000022740	-	100	70.213	ENSFDAG00000000250	-	100	70.213	Fukomys_damarensis
ENSCHIG00000022740	-	100	61.314	ENSFDAG00000008778	-	100	61.314	Fukomys_damarensis
ENSCHIG00000022740	-	100	58.993	ENSGGOG00000008603	MRPS18C	100	58.993	Gorilla_gorilla
ENSCHIG00000022740	-	100	58.065	ENSGGOG00000037903	-	100	58.065	Gorilla_gorilla
ENSCHIG00000022740	-	100	67.742	ENSGGOG00000040785	-	100	67.742	Gorilla_gorilla
ENSCHIG00000022740	-	100	65.278	ENSHGLG00000020134	-	100	65.278	Heterocephalus_glaber_female
ENSCHIG00000022740	-	100	67.808	ENSHGLG00000002953	-	100	67.808	Heterocephalus_glaber_female
ENSCHIG00000022740	-	100	65.185	ENSHGLG00000012671	-	98	65.185	Heterocephalus_glaber_female
ENSCHIG00000022740	-	100	67.808	ENSHGLG00100016235	-	100	67.808	Heterocephalus_glaber_male
ENSCHIG00000022740	-	100	65.185	ENSHGLG00100015568	-	98	65.185	Heterocephalus_glaber_male
ENSCHIG00000022740	-	100	65.278	ENSHGLG00100019678	-	100	65.278	Heterocephalus_glaber_male
ENSCHIG00000022740	-	100	75.694	ENSSTOG00000007989	MRPS18C	100	75.694	Ictidomys_tridecemlineatus
ENSCHIG00000022740	-	100	59.677	ENSJJAG00000022437	Mrps18c	100	59.677	Jaculus_jaculus
ENSCHIG00000022740	-	100	71.528	ENSLAFG00000001059	MRPS18C	100	71.528	Loxodonta_africana
ENSCHIG00000022740	-	100	60.584	ENSMFAG00000041276	-	100	60.584	Macaca_fascicularis
ENSCHIG00000022740	-	100	72.222	ENSMFAG00000003991	MRPS18C	100	72.222	Macaca_fascicularis
ENSCHIG00000022740	-	100	67.742	ENSMMUG00000015353	MRPS18C	100	67.742	Macaca_mulatta
ENSCHIG00000022740	-	100	61.806	ENSMMUG00000048717	-	100	61.806	Macaca_mulatta
ENSCHIG00000022740	-	100	60.417	ENSMMUG00000039146	-	100	60.417	Macaca_mulatta
ENSCHIG00000022740	-	100	61.364	ENSMNEG00000018700	-	100	61.364	Macaca_nemestrina
ENSCHIG00000022740	-	100	72.222	ENSMNEG00000043663	MRPS18C	100	72.222	Macaca_nemestrina
ENSCHIG00000022740	-	100	72.917	ENSMLEG00000038884	MRPS18C	100	72.917	Mandrillus_leucophaeus
ENSCHIG00000022740	-	100	70.833	ENSMICG00000032609	-	100	70.833	Microcebus_murinus
ENSCHIG00000022740	-	100	64.516	ENSMICG00000037615	-	100	64.516	Microcebus_murinus
ENSCHIG00000022740	-	100	65.278	ENSMOCG00000015591	-	100	65.278	Microtus_ochrogaster
ENSCHIG00000022740	-	100	65.278	ENSMOCG00000009898	-	100	65.278	Microtus_ochrogaster
ENSCHIG00000022740	-	73	80.808	ENSMODG00000020773	MRPS18C	69	80.808	Monodelphis_domestica
ENSCHIG00000022740	-	100	68.493	MGP_CAROLIEiJ_G0027458	Mrps18c	100	68.493	Mus_caroli
ENSCHIG00000022740	-	100	67.808	ENSMUSG00000016833	Mrps18c	100	67.808	Mus_musculus
ENSCHIG00000022740	-	100	68.493	MGP_PahariEiJ_G0017236	Mrps18c	100	68.493	Mus_pahari
ENSCHIG00000022740	-	85	61.417	MGP_SPRETEiJ_G0028455	Mrps18c	97	61.417	Mus_spretus
ENSCHIG00000022740	-	100	71.329	ENSMLUG00000017057	MRPS18C	100	71.329	Myotis_lucifugus
ENSCHIG00000022740	-	75	84.158	ENSNGAG00000015980	Mrps18c	100	68.056	Nannospalax_galili
ENSCHIG00000022740	-	100	72.222	ENSNLEG00000009119	MRPS18C	100	72.222	Nomascus_leucogenys
ENSCHIG00000022740	-	100	67.361	ENSNLEG00000018188	-	100	67.361	Nomascus_leucogenys
ENSCHIG00000022740	-	64	59.375	ENSOPRG00000004113	MRPS18C	68	59.375	Ochotona_princeps
ENSCHIG00000022740	-	100	67.361	ENSODEG00000020349	-	100	67.361	Octodon_degus
ENSCHIG00000022740	-	100	65.753	ENSODEG00000007599	-	100	65.753	Octodon_degus
ENSCHIG00000022740	-	100	83.916	ENSOARG00000002770	MRPS18C	100	83.916	Ovis_aries
ENSCHIG00000022740	-	100	73.239	ENSPPAG00000037122	MRPS18C	100	73.239	Pan_paniscus
ENSCHIG00000022740	-	100	58.871	ENSPPAG00000037400	-	100	58.871	Pan_paniscus
ENSCHIG00000022740	-	100	69.930	ENSPPRG00000011089	MRPS18C	100	69.930	Panthera_pardus
ENSCHIG00000022740	-	100	69.231	ENSPTIG00000021242	MRPS18C	100	69.231	Panthera_tigris_altaica
ENSCHIG00000022740	-	100	73.239	ENSPTRG00000016233	MRPS18C	100	73.239	Pan_troglodytes
ENSCHIG00000022740	-	100	57.258	ENSPTRG00000047058	-	100	57.258	Pan_troglodytes
ENSCHIG00000022740	-	100	60.417	ENSPANG00000034202	-	100	60.417	Papio_anubis
ENSCHIG00000022740	-	100	71.528	ENSPANG00000033931	MRPS18C	100	71.528	Papio_anubis
ENSCHIG00000022740	-	100	69.444	ENSPEMG00000008390	Mrps18c	100	69.444	Peromyscus_maniculatus_bairdii
ENSCHIG00000022740	-	73	79.798	ENSPCIG00000019737	-	97	79.798	Phascolarctos_cinereus
ENSCHIG00000022740	-	98	55.072	ENSPCIG00000000097	-	99	55.072	Phascolarctos_cinereus
ENSCHIG00000022740	-	74	79.000	ENSPCIG00000005376	-	72	79.000	Phascolarctos_cinereus
ENSCHIG00000022740	-	100	72.222	ENSPPYG00000025867	MRPS18C	100	72.222	Pongo_abelii
ENSCHIG00000022740	-	98	69.014	ENSPPYG00000025835	-	99	69.014	Pongo_abelii
ENSCHIG00000022740	-	100	65.972	ENSPCAG00000004975	MRPS18C	100	65.972	Procavia_capensis
ENSCHIG00000022740	-	100	70.833	ENSPCOG00000017634	MRPS18C	100	70.833	Propithecus_coquereli
ENSCHIG00000022740	-	64	63.265	ENSPVAG00000006439	MRPS18C	100	63.265	Pteropus_vampyrus
ENSCHIG00000022740	-	100	66.438	ENSRNOG00000002178	Mrps18c	100	66.438	Rattus_norvegicus
ENSCHIG00000022740	-	100	72.917	ENSRBIG00000041685	MRPS18C	100	72.917	Rhinopithecus_bieti
ENSCHIG00000022740	-	100	61.290	ENSRBIG00000031637	-	100	61.290	Rhinopithecus_bieti
ENSCHIG00000022740	-	100	74.242	ENSRBIG00000035023	-	100	74.242	Rhinopithecus_bieti
ENSCHIG00000022740	-	100	62.097	ENSRROG00000030722	-	100	62.097	Rhinopithecus_roxellana
ENSCHIG00000022740	-	100	72.917	ENSRROG00000044334	MRPS18C	100	72.917	Rhinopithecus_roxellana
ENSCHIG00000022740	-	100	74.242	ENSRROG00000033834	-	100	74.242	Rhinopithecus_roxellana
ENSCHIG00000022740	-	100	65.152	ENSSBOG00000029234	-	100	65.152	Saimiri_boliviensis_boliviensis
ENSCHIG00000022740	-	100	70.833	ENSSBOG00000027568	-	100	70.833	Saimiri_boliviensis_boliviensis
ENSCHIG00000022740	-	99	61.194	ENSSBOG00000032292	-	100	61.194	Saimiri_boliviensis_boliviensis
ENSCHIG00000022740	-	99	63.380	ENSSBOG00000022205	-	92	63.380	Saimiri_boliviensis_boliviensis
ENSCHIG00000022740	-	73	80.808	ENSSHAG00000007084	MRPS18C	69	80.808	Sarcophilus_harrisii
ENSCHIG00000022740	-	100	75.524	ENSSSCG00000038042	MRPS18C	100	75.524	Sus_scrofa
ENSCHIG00000022740	-	100	70.139	ENSTBEG00000012505	MRPS18C	100	70.139	Tupaia_belangeri
ENSCHIG00000022740	-	100	74.126	ENSTTRG00000004897	MRPS18C	100	74.126	Tursiops_truncatus
ENSCHIG00000022740	-	100	73.427	ENSUAMG00000012878	MRPS18C	100	73.427	Ursus_americanus
ENSCHIG00000022740	-	100	73.427	ENSUMAG00000008829	MRPS18C	100	73.427	Ursus_maritimus
ENSCHIG00000022740	-	100	69.231	ENSVPAG00000011358	MRPS18C	100	69.231	Vicugna_pacos
ENSCHIG00000022740	-	100	71.329	ENSVVUG00000015672	MRPS18C	100	71.329	Vulpes_vulpes