EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000022971 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 7723 bases
Position: chrLWLT01000021.1:10566933-10574655
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000026773	zf-RNPHF	PF08080.12	2.6e-18	1	1
ENSCHIP00000026773	RRM_1	PF00076.22	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000034639	-	1113	-	ENSCHIP00000026773	370 (aa)	-	UPI000D1902BD

Gene Model

Click here to download ENSCHIG00000022971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000022971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000022971	-	55	56.164	ENSCHIG00000014979	-	79	56.164
ENSCHIG00000022971	-	97	56.802	ENSCHIG00000021285	HNRNPH1	91	57.042
ENSCHIG00000022971	-	97	55.819	ENSCHIG00000019883	-	94	56.075
ENSCHIG00000022971	-	85	40.625	ENSCHIG00000021580	GRSF1	68	50.769
ENSCHIG00000022971	-	99	74.510	ENSCHIG00000006714	HNRNPF	98	74.510
ENSCHIG00000022971	-	97	55.582	ENSCHIG00000010404	-	94	55.841

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000022971	-	99	72.616	ENSG00000169813	HNRNPF	100	70.408	Homo_sapiens
ENSCHIG00000022971	-	99	74.020	ENSAMEG00000018983	HNRNPF	98	74.020	Ailuropoda_melanoleuca
ENSCHIG00000022971	-	99	70.416	ENSANAG00000033285	-	97	70.416	Aotus_nancymaae
ENSCHIG00000022971	-	90	60.215	ENSANAG00000033452	-	89	60.215	Aotus_nancymaae
ENSCHIG00000022971	-	100	70.142	ENSBTAG00000020513	-	100	70.142	Bos_taurus
ENSCHIG00000022971	-	99	74.510	ENSBTAG00000008853	HNRNPF	98	74.510	Bos_taurus
ENSCHIG00000022971	-	99	72.616	ENSCJAG00000008291	HNRNPF	97	72.616	Callithrix_jacchus
ENSCHIG00000022971	-	99	74.020	ENSCAFG00000007044	HNRNPF	98	74.020	Canis_familiaris
ENSCHIG00000022971	-	100	70.476	ENSTSYG00000030439	-	100	70.476	Carlito_syrichta
ENSCHIG00000022971	-	100	63.081	ENSTSYG00000002112	-	100	63.081	Carlito_syrichta
ENSCHIG00000022971	-	99	73.039	ENSCAPG00000011521	HNRNPF	97	73.039	Cavia_aperea
ENSCHIG00000022971	-	99	73.039	ENSCPOG00000003678	HNRNPF	97	73.039	Cavia_porcellus
ENSCHIG00000022971	-	99	62.121	ENSCCAG00000028687	-	97	62.121	Cebus_capucinus
ENSCHIG00000022971	-	99	72.372	ENSCCAG00000031457	-	97	72.372	Cebus_capucinus
ENSCHIG00000022971	-	99	73.039	ENSCLAG00000005161	HNRNPF	97	73.039	Chinchilla_lanigera
ENSCHIG00000022971	-	99	71.394	ENSCANG00000003086	-	97	71.394	Colobus_angolensis_palliatus
ENSCHIG00000022971	-	99	72.616	ENSCGRG00001016276	Hnrnpf	97	72.616	Cricetulus_griseus_chok1gshd
ENSCHIG00000022971	-	95	57.951	ENSCGRG00001016206	-	88	57.951	Cricetulus_griseus_chok1gshd
ENSCHIG00000022971	-	97	71.144	ENSDNOG00000030849	-	97	71.394	Dasypus_novemcinctus
ENSCHIG00000022971	-	99	66.259	ENSDORG00000005431	-	97	66.259	Dipodomys_ordii
ENSCHIG00000022971	-	99	70.732	ENSDORG00000024936	-	97	70.732	Dipodomys_ordii
ENSCHIG00000022971	-	99	67.892	ENSDORG00000008260	-	97	67.892	Dipodomys_ordii
ENSCHIG00000022971	-	99	72.372	ENSDORG00000024298	-	97	72.372	Dipodomys_ordii
ENSCHIG00000022971	-	99	73.775	ENSEASG00005006903	HNRNPF	97	73.775	Equus_asinus_asinus
ENSCHIG00000022971	-	100	71.533	ENSECAG00000003229	HNRNPF	100	71.533	Equus_caballus
ENSCHIG00000022971	-	99	74.020	ENSFCAG00000028219	-	98	74.020	Felis_catus
ENSCHIG00000022971	-	99	63.930	ENSFDAG00000015308	-	96	63.930	Fukomys_damarensis
ENSCHIG00000022971	-	85	70.028	ENSFDAG00000007858	-	87	70.028	Fukomys_damarensis
ENSCHIG00000022971	-	99	73.039	ENSFDAG00000011431	-	97	73.039	Fukomys_damarensis
ENSCHIG00000022971	-	92	71.842	ENSGGOG00000010867	HNRNPF	93	71.842	Gorilla_gorilla
ENSCHIG00000022971	-	99	70.833	ENSHGLG00000010276	-	97	70.833	Heterocephalus_glaber_female
ENSCHIG00000022971	-	98	64.951	ENSHGLG00000017607	-	97	64.951	Heterocephalus_glaber_female
ENSCHIG00000022971	-	99	71.838	ENSHGLG00000000147	-	99	71.838	Heterocephalus_glaber_female
ENSCHIG00000022971	-	92	69.129	ENSHGLG00000014139	-	97	69.129	Heterocephalus_glaber_female
ENSCHIG00000022971	-	98	72.414	ENSHGLG00100020825	-	99	72.414	Heterocephalus_glaber_male
ENSCHIG00000022971	-	98	70.545	ENSHGLG00100019572	-	97	70.545	Heterocephalus_glaber_male
ENSCHIG00000022971	-	98	70.270	ENSHGLG00100019558	-	97	70.270	Heterocephalus_glaber_male
ENSCHIG00000022971	-	96	66.085	ENSHGLG00100019910	-	100	66.085	Heterocephalus_glaber_male
ENSCHIG00000022971	-	92	62.269	ENSHGLG00100010905	-	97	62.269	Heterocephalus_glaber_male
ENSCHIG00000022971	-	99	73.594	ENSSTOG00000025560	-	97	73.594	Ictidomys_tridecemlineatus
ENSCHIG00000022971	-	99	61.071	ENSSTOG00000023820	-	97	61.071	Ictidomys_tridecemlineatus
ENSCHIG00000022971	-	99	65.931	ENSSTOG00000022853	-	97	65.931	Ictidomys_tridecemlineatus
ENSCHIG00000022971	-	99	61.209	ENSJJAG00000022288	-	97	61.209	Jaculus_jaculus
ENSCHIG00000022971	-	100	63.333	ENSJJAG00000017385	-	100	63.333	Jaculus_jaculus
ENSCHIG00000022971	-	100	49.875	ENSJJAG00000014424	-	100	49.875	Jaculus_jaculus
ENSCHIG00000022971	-	99	55.527	ENSJJAG00000000554	-	97	55.527	Jaculus_jaculus
ENSCHIG00000022971	-	92	70.292	ENSJJAG00000014334	-	99	70.292	Jaculus_jaculus
ENSCHIG00000022971	-	99	72.727	ENSLAFG00000000424	HNRNPF	98	72.727	Loxodonta_africana
ENSCHIG00000022971	-	99	72.616	ENSMFAG00000021184	HNRNPF	97	72.616	Macaca_fascicularis
ENSCHIG00000022971	-	99	72.616	ENSMMUG00000020982	HNRNPF	97	72.616	Macaca_mulatta
ENSCHIG00000022971	-	99	72.616	ENSMLEG00000023515	HNRNPF	97	72.616	Mandrillus_leucophaeus
ENSCHIG00000022971	-	99	72.616	ENSMAUG00000007892	Hnrnpf	97	72.616	Mesocricetus_auratus
ENSCHIG00000022971	-	99	58.513	ENSMICG00000044171	-	97	58.513	Microcebus_murinus
ENSCHIG00000022971	-	99	59.268	ENSMICG00000043739	-	97	59.268	Microcebus_murinus
ENSCHIG00000022971	-	99	72.616	ENSMOCG00000014915	Hnrnpf	97	72.616	Microtus_ochrogaster
ENSCHIG00000022971	-	99	72.616	ENSMUSG00000042079	Hnrnpf	97	72.616	Mus_musculus
ENSCHIG00000022971	-	99	72.372	MGP_PahariEiJ_G0026903	-	97	72.372	Mus_pahari
ENSCHIG00000022971	-	98	73.945	ENSMPUG00000017283	HNRNPF	99	73.945	Mustela_putorius_furo
ENSCHIG00000022971	-	99	71.951	ENSMLUG00000007261	HNRNPF	98	71.951	Myotis_lucifugus
ENSCHIG00000022971	-	100	57.757	ENSNGAG00000014079	-	100	57.757	Nannospalax_galili
ENSCHIG00000022971	-	99	72.616	ENSNGAG00000010409	-	97	72.616	Nannospalax_galili
ENSCHIG00000022971	-	100	52.840	ENSNGAG00000009482	-	100	52.840	Nannospalax_galili
ENSCHIG00000022971	-	100	71.429	ENSNLEG00000019098	HNRNPF	100	71.429	Nomascus_leucogenys
ENSCHIG00000022971	-	99	73.039	ENSODEG00000019266	-	97	73.039	Octodon_degus
ENSCHIG00000022971	-	99	68.137	ENSODEG00000002359	-	98	68.137	Octodon_degus
ENSCHIG00000022971	-	99	72.861	ENSOCUG00000024719	-	97	72.861	Oryctolagus_cuniculus
ENSCHIG00000022971	-	99	69.193	ENSOCUG00000024604	-	97	69.193	Oryctolagus_cuniculus
ENSCHIG00000022971	-	99	69.682	ENSOGAG00000030480	-	97	69.682	Otolemur_garnettii
ENSCHIG00000022971	-	99	67.157	ENSOGAG00000013734	-	97	67.157	Otolemur_garnettii
ENSCHIG00000022971	-	89	72.581	ENSOARG00000003995	HNRNPF	91	72.581	Ovis_aries
ENSCHIG00000022971	-	100	79.167	ENSOARG00000016658	-	100	79.167	Ovis_aries
ENSCHIG00000022971	-	99	74.020	ENSPPRG00000021222	HNRNPF	98	74.020	Panthera_pardus
ENSCHIG00000022971	-	99	74.020	ENSPTIG00000009644	HNRNPF	98	74.020	Panthera_tigris_altaica
ENSCHIG00000022971	-	99	72.616	ENSPTRG00000002446	HNRNPF	97	72.616	Pan_troglodytes
ENSCHIG00000022971	-	99	72.861	ENSPANG00000002212	HNRNPF	97	72.861	Papio_anubis
ENSCHIG00000022971	-	99	72.616	ENSPPYG00000002212	HNRNPF	97	72.616	Pongo_abelii
ENSCHIG00000022971	-	99	72.304	ENSPCAG00000013169	HNRNPF	98	72.304	Procavia_capensis
ENSCHIG00000022971	-	99	73.892	ENSPVAG00000011646	HNRNPF	97	73.892	Pteropus_vampyrus
ENSCHIG00000022971	-	99	72.616	ENSRNOG00000014562	Hnrnpf	97	72.616	Rattus_norvegicus
ENSCHIG00000022971	-	99	72.616	ENSRROG00000001235	HNRNPF	97	72.616	Rhinopithecus_roxellana
ENSCHIG00000022971	-	99	72.616	ENSSBOG00000018361	HNRNPF	97	72.616	Saimiri_boliviensis_boliviensis
ENSCHIG00000022971	-	99	73.350	ENSSARG00000010059	HNRNPF	97	73.350	Sorex_araneus
ENSCHIG00000022971	-	99	73.775	ENSSSCG00000010203	-	98	73.775	Sus_scrofa
ENSCHIG00000022971	-	99	48.837	ENSSSCG00000024956	-	93	48.837	Sus_scrofa
ENSCHIG00000022971	-	98	54.408	ENSTBEG00000016094	HNRNPF	99	54.408	Tupaia_belangeri
ENSCHIG00000022971	-	99	74.020	ENSUAMG00000000455	HNRNPF	98	74.020	Ursus_americanus
ENSCHIG00000022971	-	99	74.020	ENSUMAG00000016485	HNRNPF	98	74.020	Ursus_maritimus
ENSCHIG00000022971	-	99	74.020	ENSVVUG00000021261	HNRNPF	98	74.020	Vulpes_vulpes