EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000023097 (Gene tree)
Gene ID: 102169247
Gene Symbol: SFPQ
Alias: PPP1R140|PSF
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 14558 bases
Position: chr3:10260948-10275505
Accession: 102169247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000026978	RRM_1	PF00076.22	3.5e-30	1	2
ENSCHIP00000026978	RRM_1	PF00076.22	3.5e-30	2	2
ENSCHIP00000026986	RRM_1	PF00076.22	4e-30	1	2
ENSCHIP00000026986	RRM_1	PF00076.22	4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000034845	SFPQ-201	2131	XM_018041366	ENSCHIP00000026978	673 (aa)	XP_017896855	UPI0008470A49
ENSCHIT00000034853	SFPQ-202	5156	XM_018041351	ENSCHIP00000026986	711 (aa)	XP_017896840	UPI0008467922

Gene Model

Click here to download ENSCHIG00000023097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023097's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000023097	SFPQ	54	68.564	ENSCHIG00000016708	PSPC1	90	58.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023097	SFPQ	100	96.218	ENSG00000116560	SFPQ	100	100.000	Homo_sapiens
ENSCHIG00000023097	SFPQ	61	74.596	ENSAPOG00000024257	sfpq	62	74.376	Acanthochromis_polyacanthus
ENSCHIG00000023097	SFPQ	62	100.000	ENSAMEG00000000815	SFPQ	100	100.000	Ailuropoda_melanoleuca
ENSCHIG00000023097	SFPQ	79	61.092	ENSACIG00000000905	sfpq	72	70.481	Amphilophus_citrinellus
ENSCHIG00000023097	SFPQ	60	74.246	ENSAOCG00000002889	sfpq	61	73.696	Amphiprion_ocellaris
ENSCHIG00000023097	SFPQ	60	74.246	ENSAPEG00000016556	sfpq	61	73.696	Amphiprion_percula
ENSCHIG00000023097	SFPQ	73	68.846	ENSATEG00000002981	sfpq	67	76.082	Anabas_testudineus
ENSCHIG00000023097	SFPQ	85	71.074	ENSANAG00000027438	-	68	83.447	Aotus_nancymaae
ENSCHIG00000023097	SFPQ	62	72.973	ENSACLG00000022332	sfpq	63	73.529	Astatotilapia_calliptera
ENSCHIG00000023097	SFPQ	62	69.841	ENSAMXG00000011538	sfpq	65	72.273	Astyanax_mexicanus
ENSCHIG00000023097	SFPQ	100	99.297	ENSBTAG00000016328	SFPQ	100	99.297	Bos_taurus
ENSCHIG00000023097	SFPQ	100	95.798	ENSCJAG00000001431	SFPQ	79	93.728	Callithrix_jacchus
ENSCHIG00000023097	SFPQ	100	76.117	ENSCAFG00000017608	-	87	83.389	Canis_familiaris
ENSCHIG00000023097	SFPQ	82	96.048	ENSCAFG00000003595	-	100	91.421	Canis_familiaris
ENSCHIG00000023097	SFPQ	100	95.798	ENSCCAG00000029361	-	79	93.548	Cebus_capucinus
ENSCHIG00000023097	SFPQ	68	73.931	ENSCATG00000032664	-	79	73.582	Cercocebus_atys
ENSCHIG00000023097	SFPQ	63	96.698	ENSCATG00000036179	-	80	91.697	Cercocebus_atys
ENSCHIG00000023097	SFPQ	100	96.224	ENSCSAG00000001082	SFPQ	85	94.527	Chlorocebus_sabaeus
ENSCHIG00000023097	SFPQ	53	95.263	ENSCHOG00000009131	SFPQ	100	95.263	Choloepus_hoffmanni
ENSCHIG00000023097	SFPQ	63	92.428	ENSCPBG00000018674	SFPQ	69	92.793	Chrysemys_picta_bellii
ENSCHIG00000023097	SFPQ	84	91.181	ENSCGRG00001011698	Sfpq	85	92.845	Cricetulus_griseus_chok1gshd
ENSCHIG00000023097	SFPQ	61	99.536	ENSCGRG00000010128	Sfpq	95	99.536	Cricetulus_griseus_crigri
ENSCHIG00000023097	SFPQ	99	55.111	ENSCSEG00000007852	sfpq	66	72.936	Cynoglossus_semilaevis
ENSCHIG00000023097	SFPQ	60	70.023	ENSCVAG00000019538	sfpq	64	66.901	Cyprinodon_variegatus
ENSCHIG00000023097	SFPQ	62	71.298	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSCHIG00000023097	SFPQ	100	95.921	ENSDNOG00000049454	SFPQ	100	95.921	Dasypus_novemcinctus
ENSCHIG00000023097	SFPQ	100	96.067	ENSDORG00000008109	Sfpq	100	96.067	Dipodomys_ordii
ENSCHIG00000023097	SFPQ	61	92.807	ENSETEG00000001095	SFPQ	61	92.807	Echinops_telfairi
ENSCHIG00000023097	SFPQ	100	97.479	ENSEASG00005012012	SFPQ	100	97.479	Equus_asinus_asinus
ENSCHIG00000023097	SFPQ	100	97.479	ENSECAG00000000642	SFPQ	100	97.479	Equus_caballus
ENSCHIG00000023097	SFPQ	60	72.454	ENSELUG00000023145	sfpq	66	71.462	Esox_lucius
ENSCHIG00000023097	SFPQ	100	97.609	ENSFCAG00000042862	SFPQ	100	97.609	Felis_catus
ENSCHIG00000023097	SFPQ	60	73.782	ENSGMOG00000011957	sfpq	65	73.782	Gadus_morhua
ENSCHIG00000023097	SFPQ	61	74.943	ENSGMOG00000011950	SFPQ	74	75.000	Gadus_morhua
ENSCHIG00000023097	SFPQ	62	94.292	ENSGALG00000002514	SFPQ	68	94.292	Gallus_gallus
ENSCHIG00000023097	SFPQ	92	53.453	ENSGAFG00000014571	sfpq	57	77.914	Gambusia_affinis
ENSCHIG00000023097	SFPQ	76	64.632	ENSGACG00000002034	sfpq	68	74.654	Gasterosteus_aculeatus
ENSCHIG00000023097	SFPQ	75	99.538	ENSGGOG00000026354	SFPQ	100	100.000	Gorilla_gorilla
ENSCHIG00000023097	SFPQ	62	72.973	ENSHBUG00000016818	sfpq	63	73.529	Haplochromis_burtoni
ENSCHIG00000023097	SFPQ	67	99.168	ENSHGLG00000012001	SFPQ	86	93.035	Heterocephalus_glaber_female
ENSCHIG00000023097	SFPQ	63	73.214	ENSHCOG00000008612	sfpq	58	72.912	Hippocampus_comes
ENSCHIG00000023097	SFPQ	63	70.000	ENSIPUG00000013076	SFPQ	73	72.769	Ictalurus_punctatus
ENSCHIG00000023097	SFPQ	68	99.380	ENSJJAG00000015633	Sfpq	85	93.012	Jaculus_jaculus
ENSCHIG00000023097	SFPQ	61	69.725	ENSKMAG00000000238	sfpq	54	70.805	Kryptolebias_marmoratus
ENSCHIG00000023097	SFPQ	61	73.502	ENSLBEG00000003163	sfpq	57	73.206	Labrus_bergylta
ENSCHIG00000023097	SFPQ	61	76.027	ENSLACG00000014728	SFPQ	70	80.093	Latimeria_chalumnae
ENSCHIG00000023097	SFPQ	89	61.824	ENSLOCG00000001067	sfpq	69	80.711	Lepisosteus_oculatus
ENSCHIG00000023097	SFPQ	86	96.694	ENSLAFG00000015951	SFPQ	79	92.613	Loxodonta_africana
ENSCHIG00000023097	SFPQ	100	96.218	ENSMFAG00000000797	SFPQ	79	94.086	Macaca_fascicularis
ENSCHIG00000023097	SFPQ	100	96.078	ENSMMUG00000019154	SFPQ	79	94.086	Macaca_mulatta
ENSCHIG00000023097	SFPQ	100	96.359	ENSMNEG00000038895	SFPQ	79	94.265	Macaca_nemestrina
ENSCHIG00000023097	SFPQ	75	67.518	ENSMAMG00000007875	sfpq	66	77.726	Mastacembelus_armatus
ENSCHIG00000023097	SFPQ	62	72.973	ENSMZEG00005026091	sfpq	64	73.529	Maylandia_zebra
ENSCHIG00000023097	SFPQ	50	94.643	ENSMGAG00000004237	SFPQ	100	91.049	Meleagris_gallopavo
ENSCHIG00000023097	SFPQ	67	98.745	ENSMAUG00000006402	Sfpq	85	92.512	Mesocricetus_auratus
ENSCHIG00000023097	SFPQ	100	95.798	ENSMICG00000027265	SFPQ	86	94.196	Microcebus_murinus
ENSCHIG00000023097	SFPQ	68	95.021	ENSMOCG00000019075	Sfpq	99	95.021	Microtus_ochrogaster
ENSCHIG00000023097	SFPQ	80	62.414	ENSMMOG00000001074	sfpq	65	74.419	Mola_mola
ENSCHIG00000023097	SFPQ	63	96.188	ENSMODG00000017937	SFPQ	65	96.372	Monodelphis_domestica
ENSCHIG00000023097	SFPQ	60	74.884	ENSMALG00000010381	sfpq	64	75.389	Monopterus_albus
ENSCHIG00000023097	SFPQ	67	98.954	MGP_CAROLIEiJ_G0026487	Sfpq	69	98.347	Mus_caroli
ENSCHIG00000023097	SFPQ	67	98.954	ENSMUSG00000028820	Sfpq	69	98.347	Mus_musculus
ENSCHIG00000023097	SFPQ	84	90.803	MGP_PahariEiJ_G0028818	Sfpq	69	98.347	Mus_pahari
ENSCHIG00000023097	SFPQ	67	98.954	MGP_SPRETEiJ_G0027466	Sfpq	69	98.347	Mus_spretus
ENSCHIG00000023097	SFPQ	63	97.111	ENSMLUG00000027090	SFPQ	100	97.111	Myotis_lucifugus
ENSCHIG00000023097	SFPQ	68	98.763	ENSNGAG00000000888	Sfpq	69	98.351	Nannospalax_galili
ENSCHIG00000023097	SFPQ	89	57.614	ENSNBRG00000017479	sfpq	64	73.756	Neolamprologus_brichardi
ENSCHIG00000023097	SFPQ	63	95.556	ENSMEUG00000014082	SFPQ	64	95.556	Notamacropus_eugenii
ENSCHIG00000023097	SFPQ	71	94.094	ENSOPRG00000013696	SFPQ	62	99.772	Ochotona_princeps
ENSCHIG00000023097	SFPQ	65	87.879	ENSODEG00000005485	SFPQ	86	87.021	Octodon_degus
ENSCHIG00000023097	SFPQ	62	74.099	ENSONIG00000017737	sfpq	57	80.601	Oreochromis_niloticus
ENSCHIG00000023097	SFPQ	72	89.768	ENSOCUG00000001877	SFPQ	86	100.000	Oryctolagus_cuniculus
ENSCHIG00000023097	SFPQ	93	54.772	ENSORLG00000007459	sfpq	57	72.158	Oryzias_latipes
ENSCHIG00000023097	SFPQ	71	65.226	ENSORLG00015002131	sfpq	58	71.494	Oryzias_latipes_hsok
ENSCHIG00000023097	SFPQ	99	52.208	ENSOMEG00000018020	sfpq	56	71.926	Oryzias_melastigma
ENSCHIG00000023097	SFPQ	74	97.921	ENSOGAG00000027710	SFPQ	100	97.921	Otolemur_garnettii
ENSCHIG00000023097	SFPQ	74	99.769	ENSOARG00000019439	SFPQ	80	99.769	Ovis_aries
ENSCHIG00000023097	SFPQ	68	93.802	ENSPTRG00000000518	SFPQ	85	89.386	Pan_troglodytes
ENSCHIG00000023097	SFPQ	100	81.180	ENSPANG00000005380	SFPQ	73	100.000	Papio_anubis
ENSCHIG00000023097	SFPQ	80	62.988	ENSPKIG00000023035	sfpq	73	79.263	Paramormyrops_kingsleyae
ENSCHIG00000023097	SFPQ	61	94.664	ENSPSIG00000011494	SFPQ	100	94.664	Pelodiscus_sinensis
ENSCHIG00000023097	SFPQ	60	69.014	ENSPMGG00000023883	sfpq	58	81.115	Periophthalmus_magnuspinnatus
ENSCHIG00000023097	SFPQ	66	98.726	ENSPEMG00000009794	Sfpq	97	98.726	Peromyscus_maniculatus_bairdii
ENSCHIG00000023097	SFPQ	63	95.964	ENSPCIG00000000923	SFPQ	70	93.673	Phascolarctos_cinereus
ENSCHIG00000023097	SFPQ	76	59.571	ENSPFOG00000003127	sfpq	71	68.591	Poecilia_formosa
ENSCHIG00000023097	SFPQ	100	96.218	ENSPPYG00000001560	SFPQ	79	94.086	Pongo_abelii
ENSCHIG00000023097	SFPQ	60	98.834	ENSPCAG00000006164	SFPQ	60	98.834	Procavia_capensis
ENSCHIG00000023097	SFPQ	68	100.000	ENSPCOG00000027127	SFPQ	85	94.030	Propithecus_coquereli
ENSCHIG00000023097	SFPQ	100	94.796	ENSPVAG00000001865	SFPQ	85	92.333	Pteropus_vampyrus
ENSCHIG00000023097	SFPQ	62	72.973	ENSPNYG00000007494	sfpq	62	73.529	Pundamilia_nyererei
ENSCHIG00000023097	SFPQ	73	64.706	ENSPNAG00000002128	sfpq	73	73.198	Pygocentrus_nattereri
ENSCHIG00000023097	SFPQ	67	98.954	ENSRNOG00000058461	Sfpq	70	98.347	Rattus_norvegicus
ENSCHIG00000023097	SFPQ	99	72.254	ENSRBIG00000035286	SFPQ	100	100.000	Rhinopithecus_bieti
ENSCHIG00000023097	SFPQ	68	100.000	ENSRROG00000040992	SFPQ	100	100.000	Rhinopithecus_roxellana
ENSCHIG00000023097	SFPQ	58	95.607	ENSSHAG00000016107	-	97	90.646	Sarcophilus_harrisii
ENSCHIG00000023097	SFPQ	66	72.624	ENSSFOG00015009289	sfpq	79	78.005	Scleropages_formosus
ENSCHIG00000023097	SFPQ	61	77.083	ENSSMAG00000018201	sfpq	65	74.541	Scophthalmus_maximus
ENSCHIG00000023097	SFPQ	74	67.173	ENSSDUG00000008402	sfpq	65	78.291	Seriola_dumerili
ENSCHIG00000023097	SFPQ	97	54.462	ENSSLDG00000018917	sfpq	65	78.291	Seriola_lalandi_dorsalis
ENSCHIG00000023097	SFPQ	52	100.000	ENSSARG00000006409	SFPQ	100	100.000	Sorex_araneus
ENSCHIG00000023097	SFPQ	64	71.274	ENSSPAG00000016550	sfpq	64	74.830	Stegastes_partitus
ENSCHIG00000023097	SFPQ	100	97.046	ENSSSCG00000035690	SFPQ	100	97.046	Sus_scrofa
ENSCHIG00000023097	SFPQ	61	94.896	ENSTGUG00000001722	SFPQ	100	94.896	Taeniopygia_guttata
ENSCHIG00000023097	SFPQ	61	75.402	ENSTRUG00000003783	sfpq	62	76.092	Takifugu_rubripes
ENSCHIG00000023097	SFPQ	61	76.484	ENSTNIG00000011331	sfpq	72	76.027	Tetraodon_nigroviridis
ENSCHIG00000023097	SFPQ	84	92.000	ENSTTRG00000013930	SFPQ	85	89.667	Tursiops_truncatus
ENSCHIG00000023097	SFPQ	58	98.382	ENSUAMG00000026758	SFPQ	100	98.382	Ursus_americanus
ENSCHIG00000023097	SFPQ	66	90.315	ENSVPAG00000006960	-	67	90.315	Vicugna_pacos
ENSCHIG00000023097	SFPQ	64	80.172	ENSXETG00000009682	sfpq	100	85.139	Xenopus_tropicalis