EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000023144 (Gene tree)
Gene ID: 102174235
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 122451 bases
Position: chr17:41092480-41214930
Accession: 102174235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000027118	La	PF05383.17	4.8e-22	1	1
ENSCHIP00000027193	La	PF05383.17	9.4e-22	1	1
ENSCHIP00000027189	La	PF05383.17	1e-21	1	1
ENSCHIP00000027186	La	PF05383.17	1.7e-21	1	1
ENSCHIP00000027179	La	PF05383.17	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000035057	LARP1B-204	1578	XM_018061524	ENSCHIP00000027189	525 (aa)	XP_017917013	UPI000D191A2A
ENSCHIT00000035061	LARP1B-205	864	-	ENSCHIP00000027193	287 (aa)	-	UPI000D193235
ENSCHIT00000035047	LARP1B-202	2793	-	ENSCHIP00000027179	930 (aa)	-	UPI000D191C9A
ENSCHIT00000035054	LARP1B-203	2781	XM_018061521	ENSCHIP00000027186	926 (aa)	XP_017917010	UPI000D1906E9
ENSCHIT00000034985	LARP1B-201	1587	XM_018061525	ENSCHIP00000027118	334 (aa)	XP_017917014	UPI0003AF719A

Gene Model

Click here to download ENSCHIG00000023144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000023144	LARP1B	94	60.286	ENSCHIG00000014414	LARP1	85	59.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023144	LARP1B	100	89.286	ENSG00000138709	LARP1B	100	92.000	Homo_sapiens
ENSCHIG00000023144	LARP1B	99	54.947	ENSAPOG00000020101	larp1b	85	56.720	Acanthochromis_polyacanthus
ENSCHIG00000023144	LARP1B	100	91.667	ENSAMEG00000002748	LARP1B	100	91.667	Ailuropoda_melanoleuca
ENSCHIG00000023144	LARP1B	95	55.446	ENSACIG00000023890	larp1b	85	53.661	Amphilophus_citrinellus
ENSCHIG00000023144	LARP1B	99	52.980	ENSAOCG00000014268	larp1b	84	57.143	Amphiprion_ocellaris
ENSCHIG00000023144	LARP1B	99	56.594	ENSAPEG00000004126	larp1b	85	57.217	Amphiprion_percula
ENSCHIG00000023144	LARP1B	97	55.829	ENSATEG00000017849	larp1b	85	55.920	Anabas_testudineus
ENSCHIG00000023144	LARP1B	94	71.717	ENSAPLG00000010129	LARP1B	98	68.473	Anas_platyrhynchos
ENSCHIG00000023144	LARP1B	99	72.538	ENSACAG00000011338	LARP1B	86	77.700	Anolis_carolinensis
ENSCHIG00000023144	LARP1B	99	77.714	ENSANAG00000034618	LARP1B	96	77.410	Aotus_nancymaae
ENSCHIG00000023144	LARP1B	95	56.393	ENSACLG00000011948	larp1b	85	54.236	Astatotilapia_calliptera
ENSCHIG00000023144	LARP1B	97	54.730	ENSAMXG00000006805	larp1b	83	53.033	Astyanax_mexicanus
ENSCHIG00000023144	LARP1B	100	96.584	ENSBTAG00000012135	LARP1B	100	96.584	Bos_taurus
ENSCHIG00000023144	LARP1B	100	89.881	ENSCJAG00000003338	LARP1B	100	89.881	Callithrix_jacchus
ENSCHIG00000023144	LARP1B	100	91.066	ENSCAFG00000003831	LARP1B	100	91.176	Canis_familiaris
ENSCHIG00000023144	LARP1B	100	93.772	ENSCAFG00020018899	LARP1B	100	93.772	Canis_lupus_dingo
ENSCHIG00000023144	LARP1B	99	86.806	ENSTSYG00000002037	-	99	86.806	Carlito_syrichta
ENSCHIG00000023144	LARP1B	79	95.536	ENSCPOG00000034668	-	93	95.536	Cavia_porcellus
ENSCHIG00000023144	LARP1B	99	90.448	ENSCCAG00000021948	LARP1B	99	90.448	Cebus_capucinus
ENSCHIG00000023144	LARP1B	100	86.310	ENSCATG00000013541	LARP1B	100	88.087	Cercocebus_atys
ENSCHIG00000023144	LARP1B	100	85.121	ENSCLAG00000006448	-	100	86.505	Chinchilla_lanigera
ENSCHIG00000023144	LARP1B	98	89.458	ENSCSAG00000003582	LARP1B	100	89.325	Chlorocebus_sabaeus
ENSCHIG00000023144	LARP1B	98	81.749	ENSCHOG00000005354	LARP1B	100	81.858	Choloepus_hoffmanni
ENSCHIG00000023144	LARP1B	99	74.946	ENSCPBG00000017480	LARP1B	87	76.344	Chrysemys_picta_bellii
ENSCHIG00000023144	LARP1B	100	90.657	ENSCANG00000026958	LARP1B	100	90.657	Colobus_angolensis_palliatus
ENSCHIG00000023144	LARP1B	100	88.927	ENSCGRG00001004660	-	100	88.927	Cricetulus_griseus_chok1gshd
ENSCHIG00000023144	LARP1B	100	88.581	ENSCGRG00000001914	-	100	88.581	Cricetulus_griseus_crigri
ENSCHIG00000023144	LARP1B	95	52.960	ENSCSEG00000013519	larp1b	86	53.822	Cynoglossus_semilaevis
ENSCHIG00000023144	LARP1B	99	54.305	ENSCVAG00000005046	larp1b	85	55.659	Cyprinodon_variegatus
ENSCHIG00000023144	LARP1B	97	55.442	ENSDARG00000061169	larp1b	79	56.129	Danio_rerio
ENSCHIG00000023144	LARP1B	98	89.394	ENSDNOG00000018765	-	100	87.500	Dasypus_novemcinctus
ENSCHIG00000023144	LARP1B	87	80.833	ENSETEG00000012497	LARP1B	89	80.833	Echinops_telfairi
ENSCHIG00000023144	LARP1B	92	50.163	ENSEBUG00000003668	larp1b	87	51.469	Eptatretus_burgeri
ENSCHIG00000023144	LARP1B	99	94.097	ENSEASG00005018106	LARP1B	99	94.097	Equus_asinus_asinus
ENSCHIG00000023144	LARP1B	98	93.030	ENSECAG00000001088	LARP1B	82	89.559	Equus_caballus
ENSCHIG00000023144	LARP1B	98	49.827	ENSELUG00000023774	larp1b	77	52.793	Esox_lucius
ENSCHIG00000023144	LARP1B	100	91.667	ENSFCAG00000014650	-	100	91.667	Felis_catus
ENSCHIG00000023144	LARP1B	100	67.412	ENSFALG00000008098	LARP1B	100	67.556	Ficedula_albicollis
ENSCHIG00000023144	LARP1B	99	54.158	ENSFHEG00000010264	larp1b	82	54.490	Fundulus_heteroclitus
ENSCHIG00000023144	LARP1B	75	68.421	ENSGMOG00000005207	larp1b	60	71.218	Gadus_morhua
ENSCHIG00000023144	LARP1B	98	67.169	ENSGALG00000010207	LARP1B	87	69.053	Gallus_gallus
ENSCHIG00000023144	LARP1B	89	59.086	ENSGAFG00000012012	larp1b	98	57.589	Gambusia_affinis
ENSCHIG00000023144	LARP1B	95	52.986	ENSGACG00000004609	larp1b	82	55.905	Gasterosteus_aculeatus
ENSCHIG00000023144	LARP1B	100	75.589	ENSGAGG00000017209	LARP1B	87	76.017	Gopherus_agassizii
ENSCHIG00000023144	LARP1B	100	89.286	ENSGGOG00000015900	LARP1B	100	89.286	Gorilla_gorilla
ENSCHIG00000023144	LARP1B	95	56.517	ENSHBUG00000009730	larp1b	85	54.479	Haplochromis_burtoni
ENSCHIG00000023144	LARP1B	100	83.618	ENSHGLG00000006728	-	99	83.959	Heterocephalus_glaber_female
ENSCHIG00000023144	LARP1B	98	71.341	ENSHGLG00000013922	-	97	72.644	Heterocephalus_glaber_female
ENSCHIG00000023144	LARP1B	98	71.341	ENSHGLG00100016491	-	97	72.644	Heterocephalus_glaber_male
ENSCHIG00000023144	LARP1B	100	85.714	ENSHGLG00100014041	-	98	83.333	Heterocephalus_glaber_male
ENSCHIG00000023144	LARP1B	75	60.256	ENSHCOG00000000918	larp1b	96	60.969	Hippocampus_comes
ENSCHIG00000023144	LARP1B	98	55.219	ENSIPUG00000012138	larp1b	81	55.357	Ictalurus_punctatus
ENSCHIG00000023144	LARP1B	99	79.819	ENSSTOG00000021917	-	94	80.909	Ictidomys_tridecemlineatus
ENSCHIG00000023144	LARP1B	100	88.427	ENSSTOG00000008596	-	100	88.427	Ictidomys_tridecemlineatus
ENSCHIG00000023144	LARP1B	96	73.520	ENSSTOG00000034510	-	84	75.563	Ictidomys_tridecemlineatus
ENSCHIG00000023144	LARP1B	90	75.385	ENSSTOG00000033183	-	100	75.769	Ictidomys_tridecemlineatus
ENSCHIG00000023144	LARP1B	99	86.458	ENSJJAG00000022360	Larp1b	99	86.458	Jaculus_jaculus
ENSCHIG00000023144	LARP1B	94	55.214	ENSKMAG00000011589	larp1b	84	56.393	Kryptolebias_marmoratus
ENSCHIG00000023144	LARP1B	95	56.569	ENSLBEG00000005655	larp1b	85	56.356	Labrus_bergylta
ENSCHIG00000023144	LARP1B	98	70.737	ENSLACG00000015247	LARP1B	100	67.766	Latimeria_chalumnae
ENSCHIG00000023144	LARP1B	96	66.132	ENSLOCG00000010684	larp1b	92	66.241	Lepisosteus_oculatus
ENSCHIG00000023144	LARP1B	99	90.801	ENSLAFG00000008473	-	99	90.801	Loxodonta_africana
ENSCHIG00000023144	LARP1B	100	89.881	ENSMFAG00000002218	LARP1B	100	89.881	Macaca_fascicularis
ENSCHIG00000023144	LARP1B	100	67.247	ENSMFAG00000003306	-	93	88.194	Macaca_fascicularis
ENSCHIG00000023144	LARP1B	100	89.881	ENSMMUG00000021347	LARP1B	100	89.881	Macaca_mulatta
ENSCHIG00000023144	LARP1B	90	87.169	ENSMNEG00000030406	LARP1B	100	87.169	Macaca_nemestrina
ENSCHIG00000023144	LARP1B	65	88.811	ENSMNEG00000027747	-	91	89.706	Macaca_nemestrina
ENSCHIG00000023144	LARP1B	98	85.574	ENSMLEG00000009306	LARP1B	100	85.683	Mandrillus_leucophaeus
ENSCHIG00000023144	LARP1B	99	55.417	ENSMAMG00000000081	larp1b	87	55.614	Mastacembelus_armatus
ENSCHIG00000023144	LARP1B	75	62.824	ENSMZEG00005002545	larp1b	98	58.291	Maylandia_zebra
ENSCHIG00000023144	LARP1B	93	63.636	ENSMGAG00000004809	LARP1B	98	63.041	Meleagris_gallopavo
ENSCHIG00000023144	LARP1B	100	87.889	ENSMAUG00000007879	-	100	87.889	Mesocricetus_auratus
ENSCHIG00000023144	LARP1B	100	92.560	ENSMICG00000036111	LARP1B	100	92.560	Microcebus_murinus
ENSCHIG00000023144	LARP1B	97	70.769	ENSMICG00000028052	-	100	70.392	Microcebus_murinus
ENSCHIG00000023144	LARP1B	98	84.211	ENSMICG00000037883	-	88	84.211	Microcebus_murinus
ENSCHIG00000023144	LARP1B	78	90.875	ENSMOCG00000001490	Larp1b	95	90.875	Microtus_ochrogaster
ENSCHIG00000023144	LARP1B	100	84.952	ENSMODG00000012300	LARP1B	83	85.379	Monodelphis_domestica
ENSCHIG00000023144	LARP1B	98	55.451	ENSMALG00000003638	larp1b	85	56.064	Monopterus_albus
ENSCHIG00000023144	LARP1B	100	88.235	MGP_CAROLIEiJ_G0024962	Larp1b	100	88.235	Mus_caroli
ENSCHIG00000023144	LARP1B	100	88.581	ENSMUSG00000025762	Larp1b	100	88.581	Mus_musculus
ENSCHIG00000023144	LARP1B	100	87.889	MGP_PahariEiJ_G0026403	Larp1b	100	87.889	Mus_pahari
ENSCHIG00000023144	LARP1B	100	88.581	MGP_SPRETEiJ_G0025897	Larp1b	100	88.581	Mus_spretus
ENSCHIG00000023144	LARP1B	98	93.030	ENSMPUG00000017365	LARP1B	83	90.958	Mustela_putorius_furo
ENSCHIG00000023144	LARP1B	98	93.333	ENSMLUG00000010229	LARP1B	97	83.718	Myotis_lucifugus
ENSCHIG00000023144	LARP1B	84	55.243	ENSNBRG00000023846	larp1b	83	53.012	Neolamprologus_brichardi
ENSCHIG00000023144	LARP1B	100	89.583	ENSNLEG00000013819	LARP1B	100	89.583	Nomascus_leucogenys
ENSCHIG00000023144	LARP1B	86	80.202	ENSMEUG00000010308	LARP1B	88	80.780	Notamacropus_eugenii
ENSCHIG00000023144	LARP1B	98	72.727	ENSOPRG00000005478	LARP1B	92	75.976	Ochotona_princeps
ENSCHIG00000023144	LARP1B	100	84.429	ENSODEG00000001292	-	100	85.467	Octodon_degus
ENSCHIG00000023144	LARP1B	95	55.700	ENSONIG00000012386	larp1b	93	55.809	Oreochromis_niloticus
ENSCHIG00000023144	LARP1B	98	90.909	ENSOCUG00000013330	LARP1B	100	87.621	Oryctolagus_cuniculus
ENSCHIG00000023144	LARP1B	96	55.340	ENSORLG00000017954	larp1b	84	54.995	Oryzias_latipes
ENSCHIG00000023144	LARP1B	99	54.422	ENSORLG00020013081	larp1b	84	55.241	Oryzias_latipes_hni
ENSCHIG00000023144	LARP1B	99	55.393	ENSORLG00015009580	larp1b	84	55.497	Oryzias_latipes_hsok
ENSCHIG00000023144	LARP1B	97	53.242	ENSOMEG00000004210	larp1b	84	54.507	Oryzias_melastigma
ENSCHIG00000023144	LARP1B	98	89.666	ENSOGAG00000005771	LARP1B	98	88.634	Otolemur_garnettii
ENSCHIG00000023144	LARP1B	98	99.390	ENSOARG00000015300	LARP1B	100	98.686	Ovis_aries
ENSCHIG00000023144	LARP1B	100	88.988	ENSPPAG00000030439	LARP1B	100	88.988	Pan_paniscus
ENSCHIG00000023144	LARP1B	100	91.667	ENSPPRG00000002743	-	100	91.667	Panthera_pardus
ENSCHIG00000023144	LARP1B	100	91.667	ENSPTIG00000011225	LARP1B	100	91.667	Panthera_tigris_altaica
ENSCHIG00000023144	LARP1B	100	88.690	ENSPTRG00000016437	LARP1B	100	88.690	Pan_troglodytes
ENSCHIG00000023144	LARP1B	100	89.583	ENSPANG00000012488	LARP1B	100	89.583	Papio_anubis
ENSCHIG00000023144	LARP1B	96	52.857	ENSPKIG00000014360	larp1b	90	50.778	Paramormyrops_kingsleyae
ENSCHIG00000023144	LARP1B	99	73.535	ENSPSIG00000012885	LARP1B	93	77.879	Pelodiscus_sinensis
ENSCHIG00000023144	LARP1B	78	60.249	ENSPMGG00000007207	larp1b	91	58.682	Periophthalmus_magnuspinnatus
ENSCHIG00000023144	LARP1B	71	58.417	ENSPMAG00000002700	larp1b	94	52.694	Petromyzon_marinus
ENSCHIG00000023144	LARP1B	100	83.974	ENSPCIG00000026516	LARP1B	100	85.340	Phascolarctos_cinereus
ENSCHIG00000023144	LARP1B	99	50.413	ENSPFOG00000022837	-	78	51.287	Poecilia_formosa
ENSCHIG00000023144	LARP1B	99	55.274	ENSPFOG00000019519	larp1b	85	55.601	Poecilia_formosa
ENSCHIG00000023144	LARP1B	99	56.354	ENSPLAG00000007115	larp1b	85	56.799	Poecilia_latipinna
ENSCHIG00000023144	LARP1B	99	56.067	ENSPMEG00000001224	larp1b	85	56.485	Poecilia_mexicana
ENSCHIG00000023144	LARP1B	78	59.912	ENSPREG00000005955	-	89	54.965	Poecilia_reticulata
ENSCHIG00000023144	LARP1B	98	86.667	ENSPCAG00000007546	LARP1B	100	85.278	Procavia_capensis
ENSCHIG00000023144	LARP1B	100	91.369	ENSPCOG00000021874	LARP1B	99	94.521	Propithecus_coquereli
ENSCHIG00000023144	LARP1B	99	84.704	ENSPVAG00000005373	LARP1B	100	85.214	Pteropus_vampyrus
ENSCHIG00000023144	LARP1B	75	62.392	ENSPNYG00000017357	larp1b	98	58.365	Pundamilia_nyererei
ENSCHIG00000023144	LARP1B	97	54.639	ENSPNAG00000008823	larp1b	86	55.765	Pygocentrus_nattereri
ENSCHIG00000023144	LARP1B	100	88.690	ENSRNOG00000038366	Larp1b	100	88.690	Rattus_norvegicus
ENSCHIG00000023144	LARP1B	100	87.500	ENSRBIG00000039982	-	100	87.500	Rhinopithecus_bieti
ENSCHIG00000023144	LARP1B	100	81.250	ENSRBIG00000038568	-	92	80.952	Rhinopithecus_bieti
ENSCHIG00000023144	LARP1B	100	82.759	ENSRROG00000038525	-	96	82.414	Rhinopithecus_roxellana
ENSCHIG00000023144	LARP1B	100	89.881	ENSRROG00000030771	LARP1B	100	89.881	Rhinopithecus_roxellana
ENSCHIG00000023144	LARP1B	98	86.707	ENSSHAG00000014474	LARP1B	99	84.731	Sarcophilus_harrisii
ENSCHIG00000023144	LARP1B	95	55.895	ENSSMAG00000006347	larp1b	93	54.995	Scophthalmus_maximus
ENSCHIG00000023144	LARP1B	95	56.955	ENSSDUG00000004182	larp1b	82	57.096	Seriola_dumerili
ENSCHIG00000023144	LARP1B	97	45.645	ENSSLDG00000014613	larp1b	70	59.835	Seriola_lalandi_dorsalis
ENSCHIG00000023144	LARP1B	98	74.275	ENSSPUG00000011837	LARP1B	99	68.409	Sphenodon_punctatus
ENSCHIG00000023144	LARP1B	95	56.649	ENSSPAG00000017772	larp1b	86	56.017	Stegastes_partitus
ENSCHIG00000023144	LARP1B	99	55.944	ENSSSCG00000040491	-	99	76.471	Sus_scrofa
ENSCHIG00000023144	LARP1B	98	92.121	ENSSSCG00000034280	LARP1B	99	91.753	Sus_scrofa
ENSCHIG00000023144	LARP1B	93	67.778	ENSTGUG00000002098	-	99	64.778	Taeniopygia_guttata
ENSCHIG00000023144	LARP1B	95	55.298	ENSTRUG00000005612	larp1b	84	55.026	Takifugu_rubripes
ENSCHIG00000023144	LARP1B	95	53.725	ENSTNIG00000012398	larp1b	94	54.729	Tetraodon_nigroviridis
ENSCHIG00000023144	LARP1B	86	84.906	ENSTBEG00000004177	LARP1B	88	84.906	Tupaia_belangeri
ENSCHIG00000023144	LARP1B	98	82.969	ENSTTRG00000012984	LARP1B	100	82.969	Tursiops_truncatus
ENSCHIG00000023144	LARP1B	100	82.036	ENSUAMG00000016938	-	100	81.493	Ursus_americanus
ENSCHIG00000023144	LARP1B	100	90.205	ENSUMAG00000007373	LARP1B	100	90.205	Ursus_maritimus
ENSCHIG00000023144	LARP1B	98	80.088	ENSVPAG00000007223	LARP1B	100	80.088	Vicugna_pacos
ENSCHIG00000023144	LARP1B	100	91.066	ENSVVUG00000011307	LARP1B	100	91.585	Vulpes_vulpes
ENSCHIG00000023144	LARP1B	99	60.475	ENSXETG00000022512	larp1b	89	60.475	Xenopus_tropicalis
ENSCHIG00000023144	LARP1B	72	60.444	ENSXCOG00000004435	larp1b	73	58.391	Xiphophorus_couchianus
ENSCHIG00000023144	LARP1B	99	53.289	ENSXMAG00000008150	larp1b	85	55.979	Xiphophorus_maculatus