EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000023204 (Gene tree)
Gene ID: 100861023
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 12582 bases
Position: chr13:10874894-10887475
Accession: 100861023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000027192	RRM_1	PF00076.22	8.8e-05	1	1
ENSCHIP00000027188	RRM_1	PF00076.22	9.8e-05	1	1
ENSCHIP00000027192	G-patch	PF01585.23	5.6e-13	1	1
ENSCHIP00000027188	G-patch	PF01585.23	6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000035056	-	1206	XM_018056960	ENSCHIP00000027188	401 (aa)	XP_017912449	UPI000057DEB7
ENSCHIT00000035060	-	1149	-	ENSCHIP00000027192	382 (aa)	-	UPI000D193811

Gene Model

Click here to download ENSCHIG00000023204's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000023204	-	100	97.257	ENSCHIG00000019921	-	100	97.257

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023204	-	100	99.002	ENSG00000134453	RBM17	100	99.057	Homo_sapiens
ENSCHIG00000023204	-	99	83.127	ENSAPOG00000007101	rbm17	99	83.127	Acanthochromis_polyacanthus
ENSCHIG00000023204	-	100	99.252	ENSAMEG00000002107	RBM17	100	99.252	Ailuropoda_melanoleuca
ENSCHIG00000023204	-	100	79.167	ENSACIG00000006251	rbm17	100	79.167	Amphilophus_citrinellus
ENSCHIG00000023204	-	100	83.047	ENSAOCG00000014892	rbm17	100	83.047	Amphiprion_ocellaris
ENSCHIG00000023204	-	100	83.047	ENSAPEG00000022779	rbm17	100	83.047	Amphiprion_percula
ENSCHIG00000023204	-	100	79.245	ENSATEG00000004406	rbm17	100	79.245	Anabas_testudineus
ENSCHIG00000023204	-	100	96.020	ENSAPLG00000004190	RBM17	100	96.020	Anas_platyrhynchos
ENSCHIG00000023204	-	89	90.000	ENSACAG00000005418	RBM17	99	90.270	Anolis_carolinensis
ENSCHIG00000023204	-	100	85.969	ENSANAG00000019330	-	97	94.068	Aotus_nancymaae
ENSCHIG00000023204	-	100	99.002	ENSANAG00000030127	RBM17	100	99.002	Aotus_nancymaae
ENSCHIG00000023204	-	100	80.653	ENSACLG00000003928	rbm17	100	80.653	Astatotilapia_calliptera
ENSCHIG00000023204	-	100	77.387	ENSAMXG00000005853	rbm17	100	79.529	Astyanax_mexicanus
ENSCHIG00000023204	-	100	98.504	ENSBTAG00000011094	-	100	98.504	Bos_taurus
ENSCHIG00000023204	-	100	100.000	ENSBTAG00000021951	RBM17	100	100.000	Bos_taurus
ENSCHIG00000023204	-	73	34.783	WBGene00010233	F58B3.7	91	33.075	Caenorhabditis_elegans
ENSCHIG00000023204	-	100	99.002	ENSCJAG00000020573	RBM17	100	99.002	Callithrix_jacchus
ENSCHIG00000023204	-	100	99.252	ENSCAFG00000005206	RBM17	100	99.252	Canis_familiaris
ENSCHIG00000023204	-	100	97.423	ENSCAFG00020005420	RBM17	100	97.423	Canis_lupus_dingo
ENSCHIG00000023204	-	100	97.037	ENSTSYG00000001165	RBM17	100	97.037	Carlito_syrichta
ENSCHIG00000023204	-	96	79.508	ENSCAPG00000006275	RBM17	100	84.150	Cavia_aperea
ENSCHIG00000023204	-	100	97.668	ENSCPOG00000005679	RBM17	99	97.668	Cavia_porcellus
ENSCHIG00000023204	-	100	99.002	ENSCCAG00000018655	RBM17	100	99.002	Cebus_capucinus
ENSCHIG00000023204	-	100	99.002	ENSCATG00000041566	RBM17	100	99.002	Cercocebus_atys
ENSCHIG00000023204	-	100	97.778	ENSCLAG00000012195	RBM17	99	97.778	Chinchilla_lanigera
ENSCHIG00000023204	-	100	99.002	ENSCSAG00000013564	RBM17	100	99.002	Chlorocebus_sabaeus
ENSCHIG00000023204	-	92	79.189	ENSCHOG00000005131	RBM17	100	79.189	Choloepus_hoffmanni
ENSCHIG00000023204	-	100	94.279	ENSCPBG00000019836	RBM17	100	94.279	Chrysemys_picta_bellii
ENSCHIG00000023204	-	100	46.988	ENSCSAVG00000008782	-	100	45.411	Ciona_savignyi
ENSCHIG00000023204	-	98	85.561	ENSCANG00000023715	-	100	84.694	Colobus_angolensis_palliatus
ENSCHIG00000023204	-	100	98.753	ENSCANG00000030987	RBM17	100	98.753	Colobus_angolensis_palliatus
ENSCHIG00000023204	-	100	75.561	ENSCGRG00001009256	-	100	73.580	Cricetulus_griseus_chok1gshd
ENSCHIG00000023204	-	100	98.025	ENSCGRG00001013842	Rbm17	100	98.025	Cricetulus_griseus_chok1gshd
ENSCHIG00000023204	-	100	98.025	ENSCGRG00000006907	Rbm17	100	98.025	Cricetulus_griseus_crigri
ENSCHIG00000023204	-	100	79.310	ENSCSEG00000018164	rbm17	100	80.049	Cynoglossus_semilaevis
ENSCHIG00000023204	-	100	76.081	ENSCVAG00000002476	rbm17	100	78.372	Cyprinodon_variegatus
ENSCHIG00000023204	-	100	77.882	ENSDARG00000031346	rbm17	100	77.882	Danio_rerio
ENSCHIG00000023204	-	100	98.504	ENSDNOG00000035920	RBM17	100	98.504	Dasypus_novemcinctus
ENSCHIG00000023204	-	99	35.982	FBgn0086683	Spf45	99	36.228	Drosophila_melanogaster
ENSCHIG00000023204	-	100	74.813	ENSETEG00000006642	RBM17	87	96.714	Echinops_telfairi
ENSCHIG00000023204	-	66	70.732	ENSEBUG00000010253	rbm17	85	70.732	Eptatretus_burgeri
ENSCHIG00000023204	-	92	96.486	ENSEASG00005009236	-	100	96.486	Equus_asinus_asinus
ENSCHIG00000023204	-	100	97.933	ENSEASG00005019205	-	100	97.933	Equus_asinus_asinus
ENSCHIG00000023204	-	100	89.027	ENSECAG00000001379	-	100	89.027	Equus_caballus
ENSCHIG00000023204	-	100	89.295	ENSECAG00000008939	RBM17	100	89.295	Equus_caballus
ENSCHIG00000023204	-	86	81.686	ENSEEUG00000013077	RBM17	100	81.686	Erinaceus_europaeus
ENSCHIG00000023204	-	100	76.852	ENSELUG00000006440	rbm17	100	76.852	Esox_lucius
ENSCHIG00000023204	-	100	99.252	ENSFCAG00000031988	RBM17	100	99.252	Felis_catus
ENSCHIG00000023204	-	100	95.012	ENSFALG00000001790	RBM17	100	95.012	Ficedula_albicollis
ENSCHIG00000023204	-	100	97.778	ENSFDAG00000007470	RBM17	100	97.778	Fukomys_damarensis
ENSCHIG00000023204	-	100	81.186	ENSFHEG00000001266	rbm17	100	81.959	Fundulus_heteroclitus
ENSCHIG00000023204	-	99	75.297	ENSGMOG00000008438	rbm17	100	75.297	Gadus_morhua
ENSCHIG00000023204	-	100	96.010	ENSGALG00000006332	RBM17	100	96.010	Gallus_gallus
ENSCHIG00000023204	-	100	80.098	ENSGAFG00000019879	rbm17	100	80.835	Gambusia_affinis
ENSCHIG00000023204	-	99	81.281	ENSGACG00000019174	rbm17	99	81.281	Gasterosteus_aculeatus
ENSCHIG00000023204	-	100	94.279	ENSGAGG00000019906	RBM17	100	94.279	Gopherus_agassizii
ENSCHIG00000023204	-	100	83.538	ENSHBUG00000016624	rbm17	100	83.538	Haplochromis_burtoni
ENSCHIG00000023204	-	100	97.778	ENSHGLG00000011580	RBM17	100	97.778	Heterocephalus_glaber_female
ENSCHIG00000023204	-	100	97.778	ENSHGLG00100010460	RBM17	100	97.778	Heterocephalus_glaber_male
ENSCHIG00000023204	-	100	77.720	ENSHGLG00100010556	-	100	76.166	Heterocephalus_glaber_male
ENSCHIG00000023204	-	99	77.804	ENSHCOG00000010865	rbm17	100	77.804	Hippocampus_comes
ENSCHIG00000023204	-	100	77.518	ENSIPUG00000007699	Rbm17	100	77.889	Ictalurus_punctatus
ENSCHIG00000023204	-	100	98.272	ENSSTOG00000013591	RBM17	100	98.272	Ictidomys_tridecemlineatus
ENSCHIG00000023204	-	100	73.317	ENSJJAG00000000993	-	100	69.975	Jaculus_jaculus
ENSCHIG00000023204	-	100	98.025	ENSJJAG00000022886	Rbm17	100	98.025	Jaculus_jaculus
ENSCHIG00000023204	-	100	79.397	ENSKMAG00000021400	rbm17	100	79.115	Kryptolebias_marmoratus
ENSCHIG00000023204	-	100	82.064	ENSLBEG00000000881	rbm17	100	78.774	Labrus_bergylta
ENSCHIG00000023204	-	99	69.176	ENSLACG00000017297	RBM17	99	69.176	Latimeria_chalumnae
ENSCHIG00000023204	-	100	86.914	ENSLOCG00000015659	rbm17	100	86.914	Lepisosteus_oculatus
ENSCHIG00000023204	-	100	97.543	ENSLAFG00000011629	RBM17	100	97.543	Loxodonta_africana
ENSCHIG00000023204	-	100	99.002	ENSMFAG00000035521	RBM17	100	99.002	Macaca_fascicularis
ENSCHIG00000023204	-	100	99.002	ENSMMUG00000015152	RBM17	100	99.002	Macaca_mulatta
ENSCHIG00000023204	-	100	99.002	ENSMNEG00000017264	RBM17	100	99.002	Macaca_nemestrina
ENSCHIG00000023204	-	100	99.002	ENSMLEG00000029340	RBM17	100	99.002	Mandrillus_leucophaeus
ENSCHIG00000023204	-	100	78.302	ENSMAMG00000000387	rbm17	100	78.302	Mastacembelus_armatus
ENSCHIG00000023204	-	100	80.653	ENSMZEG00005015179	rbm17	100	80.653	Maylandia_zebra
ENSCHIG00000023204	-	100	94.118	ENSMGAG00000003981	RBM17	100	94.118	Meleagris_gallopavo
ENSCHIG00000023204	-	100	98.025	ENSMAUG00000019247	Rbm17	100	98.025	Mesocricetus_auratus
ENSCHIG00000023204	-	100	89.976	ENSMICG00000041489	-	100	89.976	Microcebus_murinus
ENSCHIG00000023204	-	100	97.531	ENSMICG00000003976	-	100	97.531	Microcebus_murinus
ENSCHIG00000023204	-	93	79.733	ENSMOCG00000014517	-	99	79.733	Microtus_ochrogaster
ENSCHIG00000023204	-	100	98.025	ENSMOCG00000011847	Rbm17	100	98.025	Microtus_ochrogaster
ENSCHIG00000023204	-	100	75.426	ENSMMOG00000010264	rbm17	100	74.209	Mola_mola
ENSCHIG00000023204	-	100	97.506	ENSMODG00000016648	RBM17	100	97.506	Monodelphis_domestica
ENSCHIG00000023204	-	100	82.005	ENSMALG00000010597	rbm17	100	82.005	Monopterus_albus
ENSCHIG00000023204	-	100	97.778	MGP_CAROLIEiJ_G0023173	Rbm17	100	97.778	Mus_caroli
ENSCHIG00000023204	-	100	97.778	ENSMUSG00000037197	Rbm17	100	97.778	Mus_musculus
ENSCHIG00000023204	-	100	97.284	MGP_PahariEiJ_G0019233	Rbm17	100	97.284	Mus_pahari
ENSCHIG00000023204	-	100	97.778	MGP_SPRETEiJ_G0024091	Rbm17	100	97.778	Mus_spretus
ENSCHIG00000023204	-	86	98.555	ENSMPUG00000016359	RBM17	97	98.555	Mustela_putorius_furo
ENSCHIG00000023204	-	100	96.798	ENSMLUG00000002302	-	100	96.798	Myotis_lucifugus
ENSCHIG00000023204	-	100	93.766	ENSMLUG00000025709	-	100	93.766	Myotis_lucifugus
ENSCHIG00000023204	-	100	69.077	ENSNGAG00000000663	-	100	68.657	Nannospalax_galili
ENSCHIG00000023204	-	100	98.025	ENSNGAG00000000741	Rbm17	100	98.025	Nannospalax_galili
ENSCHIG00000023204	-	100	81.395	ENSNBRG00000018148	rbm17	100	81.395	Neolamprologus_brichardi
ENSCHIG00000023204	-	100	99.002	ENSNLEG00000033350	RBM17	100	99.002	Nomascus_leucogenys
ENSCHIG00000023204	-	100	91.521	ENSMEUG00000011347	RBM17	100	91.521	Notamacropus_eugenii
ENSCHIG00000023204	-	100	85.287	ENSOPRG00000002993	RBM17	100	85.287	Ochotona_princeps
ENSCHIG00000023204	-	97	74.555	ENSODEG00000007286	-	99	74.555	Octodon_degus
ENSCHIG00000023204	-	100	97.537	ENSODEG00000004393	RBM17	100	97.537	Octodon_degus
ENSCHIG00000023204	-	100	83.538	ENSONIG00000011838	rbm17	100	83.538	Oreochromis_niloticus
ENSCHIG00000023204	-	100	96.030	ENSOANG00000015455	RBM17	100	96.030	Ornithorhynchus_anatinus
ENSCHIG00000023204	-	100	80.101	ENSORLG00000028798	rbm17	100	80.590	Oryzias_latipes
ENSCHIG00000023204	-	100	83.763	ENSORLG00020004593	rbm17	100	83.763	Oryzias_latipes_hni
ENSCHIG00000023204	-	100	83.538	ENSORLG00015000033	rbm17	100	83.538	Oryzias_latipes_hsok
ENSCHIG00000023204	-	100	79.717	ENSOMEG00000012060	rbm17	100	88.050	Oryzias_melastigma
ENSCHIG00000023204	-	100	97.778	ENSOGAG00000015687	RBM17	100	97.778	Otolemur_garnettii
ENSCHIG00000023204	-	100	100.000	ENSOARG00000012975	RBM17	100	100.000	Ovis_aries
ENSCHIG00000023204	-	100	99.002	ENSPPAG00000032347	RBM17	100	99.002	Pan_paniscus
ENSCHIG00000023204	-	100	99.252	ENSPPRG00000010706	RBM17	100	99.252	Panthera_pardus
ENSCHIG00000023204	-	100	99.252	ENSPTIG00000007596	RBM17	100	99.252	Panthera_tigris_altaica
ENSCHIG00000023204	-	100	99.002	ENSPTRG00000002265	RBM17	100	99.002	Pan_troglodytes
ENSCHIG00000023204	-	100	99.002	ENSPANG00000023425	RBM17	100	99.002	Papio_anubis
ENSCHIG00000023204	-	100	77.494	ENSPKIG00000005048	-	100	77.230	Paramormyrops_kingsleyae
ENSCHIG00000023204	-	100	80.235	ENSPKIG00000025526	rbm17	100	80.047	Paramormyrops_kingsleyae
ENSCHIG00000023204	-	100	92.840	ENSPSIG00000012332	RBM17	100	92.840	Pelodiscus_sinensis
ENSCHIG00000023204	-	100	78.500	ENSPMGG00000007980	rbm17	100	78.500	Periophthalmus_magnuspinnatus
ENSCHIG00000023204	-	100	98.025	ENSPEMG00000014320	Rbm17	100	98.025	Peromyscus_maniculatus_bairdii
ENSCHIG00000023204	-	100	97.270	ENSPCIG00000019260	-	100	97.270	Phascolarctos_cinereus
ENSCHIG00000023204	-	100	77.594	ENSPFOG00000013271	rbm17	100	78.302	Poecilia_formosa
ENSCHIG00000023204	-	100	78.316	ENSPLAG00000004455	rbm17	100	78.538	Poecilia_latipinna
ENSCHIG00000023204	-	100	80.835	ENSPMEG00000014864	rbm17	100	81.572	Poecilia_mexicana
ENSCHIG00000023204	-	100	79.389	ENSPREG00000015589	rbm17	100	80.153	Poecilia_reticulata
ENSCHIG00000023204	-	81	70.898	ENSPPYG00000019042	-	100	70.588	Pongo_abelii
ENSCHIG00000023204	-	99	71.930	ENSPPYG00000019881	-	100	71.679	Pongo_abelii
ENSCHIG00000023204	-	100	99.002	ENSPPYG00000002067	RBM17	100	99.002	Pongo_abelii
ENSCHIG00000023204	-	100	90.773	ENSPCAG00000016879	RBM17	100	90.773	Procavia_capensis
ENSCHIG00000023204	-	100	98.753	ENSPCOG00000027881	RBM17	100	98.753	Propithecus_coquereli
ENSCHIG00000023204	-	100	88.030	ENSPVAG00000015499	RBM17	100	86.534	Pteropus_vampyrus
ENSCHIG00000023204	-	100	79.896	ENSPNYG00000015274	rbm17	100	79.896	Pundamilia_nyererei
ENSCHIG00000023204	-	100	79.059	ENSPNAG00000030046	rbm17	100	80.605	Pygocentrus_nattereri
ENSCHIG00000023204	-	100	98.025	ENSRNOG00000018767	Rbm17	100	98.025	Rattus_norvegicus
ENSCHIG00000023204	-	100	99.002	ENSRBIG00000043727	RBM17	100	99.002	Rhinopithecus_bieti
ENSCHIG00000023204	-	100	99.002	ENSRROG00000044142	RBM17	100	99.002	Rhinopithecus_roxellana
ENSCHIG00000023204	-	100	98.753	ENSSBOG00000031661	-	100	98.753	Saimiri_boliviensis_boliviensis
ENSCHIG00000023204	-	100	88.308	ENSSBOG00000023653	-	100	88.308	Saimiri_boliviensis_boliviensis
ENSCHIG00000023204	-	100	97.506	ENSSHAG00000012480	-	100	97.506	Sarcophilus_harrisii
ENSCHIG00000023204	-	100	82.555	ENSSFOG00015009892	rbm17	100	82.555	Scleropages_formosus
ENSCHIG00000023204	-	100	80.362	ENSSMAG00000012368	rbm17	100	80.362	Scophthalmus_maximus
ENSCHIG00000023204	-	100	83.505	ENSSDUG00000015015	rbm17	100	83.505	Seriola_dumerili
ENSCHIG00000023204	-	100	83.505	ENSSLDG00000014486	rbm17	100	83.505	Seriola_lalandi_dorsalis
ENSCHIG00000023204	-	59	78.390	ENSSARG00000001792	-	100	78.390	Sorex_araneus
ENSCHIG00000023204	-	99	94.514	ENSSPUG00000001036	RBM17	99	94.514	Sphenodon_punctatus
ENSCHIG00000023204	-	100	82.801	ENSSPAG00000002338	rbm17	100	82.801	Stegastes_partitus
ENSCHIG00000023204	-	100	99.751	ENSSSCG00000011134	RBM17	100	99.751	Sus_scrofa
ENSCHIG00000023204	-	100	94.074	ENSTGUG00000002013	RBM17	100	94.074	Taeniopygia_guttata
ENSCHIG00000023204	-	100	82.512	ENSTRUG00000010698	rbm17	100	82.512	Takifugu_rubripes
ENSCHIG00000023204	-	100	82.641	ENSTNIG00000006892	rbm17	100	82.641	Tetraodon_nigroviridis
ENSCHIG00000023204	-	100	77.057	ENSTBEG00000014686	RBM17	100	77.057	Tupaia_belangeri
ENSCHIG00000023204	-	90	100.000	ENSTTRG00000001344	RBM17	100	100.000	Tursiops_truncatus
ENSCHIG00000023204	-	100	96.173	ENSUAMG00000009499	RBM17	100	96.173	Ursus_americanus
ENSCHIG00000023204	-	100	99.002	ENSUMAG00000012237	RBM17	100	99.002	Ursus_maritimus
ENSCHIG00000023204	-	100	85.287	ENSVPAG00000005497	RBM17	100	85.287	Vicugna_pacos
ENSCHIG00000023204	-	100	97.423	ENSVVUG00000006780	RBM17	100	97.423	Vulpes_vulpes
ENSCHIG00000023204	-	99	86.318	ENSXETG00000018123	rbm17	100	86.318	Xenopus_tropicalis
ENSCHIG00000023204	-	100	80.098	ENSXMAG00000008674	rbm17	100	80.835	Xiphophorus_maculatus