EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000023215 (Gene tree)
Gene ID: 102178956
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 21819 bases
Position: chr2:11084378-11106196
Accession: 102178956
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000027184	RRM_1	PF00076.22	1.6e-27	1	2
ENSCHIP00000027184	RRM_1	PF00076.22	1.6e-27	2	2
ENSCHIP00000027191	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000035052	TRNAU1AP-201	1043	XM_005676767	ENSCHIP00000027184	287 (aa)	XP_005676824	UPI00029D4546
ENSCHIT00000035059	TRNAU1AP-202	923	XM_018056968	ENSCHIP00000027191	247 (aa)	XP_017912457	UPI0003C1616C

Gene Model

Click here to download ENSCHIG00000023215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000023215	TRNAU1AP	53	32.051	ENSCHIG00000020214	TIA1	59	31.034
ENSCHIG00000023215	TRNAU1AP	62	30.675	ENSCHIG00000019004	PABPC5	96	30.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023215	TRNAU1AP	100	99.303	ENSG00000180098	TRNAU1AP	100	99.303	Homo_sapiens
ENSCHIG00000023215	TRNAU1AP	99	57.843	ENSAPOG00000007148	TRNAU1AP	99	57.843	Acanthochromis_polyacanthus
ENSCHIG00000023215	TRNAU1AP	100	98.258	ENSAMEG00000011367	TRNAU1AP	100	98.258	Ailuropoda_melanoleuca
ENSCHIG00000023215	TRNAU1AP	91	70.115	ENSACIG00000004161	trnau1apa	93	70.115	Amphilophus_citrinellus
ENSCHIG00000023215	TRNAU1AP	99	57.843	ENSAOCG00000008056	trnau1apa	99	57.843	Amphiprion_ocellaris
ENSCHIG00000023215	TRNAU1AP	99	57.843	ENSAPEG00000008868	trnau1apa	99	58.000	Amphiprion_percula
ENSCHIG00000023215	TRNAU1AP	99	57.643	ENSATEG00000012140	trnau1apa	99	55.732	Anabas_testudineus
ENSCHIG00000023215	TRNAU1AP	94	93.333	ENSAPLG00000002606	TRNAU1AP	99	93.333	Anas_platyrhynchos
ENSCHIG00000023215	TRNAU1AP	67	52.083	ENSACAG00000004205	-	73	52.083	Anolis_carolinensis
ENSCHIG00000023215	TRNAU1AP	99	75.524	ENSACAG00000003995	-	99	75.524	Anolis_carolinensis
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSANAG00000018976	TRNAU1AP	100	99.595	Aotus_nancymaae
ENSCHIG00000023215	TRNAU1AP	99	58.416	ENSACLG00000018515	trnau1apa	99	59.801	Astatotilapia_calliptera
ENSCHIG00000023215	TRNAU1AP	95	57.401	ENSAMXG00000013750	trnau1apa	90	57.401	Astyanax_mexicanus
ENSCHIG00000023215	TRNAU1AP	95	65.556	ENSAMXG00000029240	-	98	65.556	Astyanax_mexicanus
ENSCHIG00000023215	TRNAU1AP	100	99.652	ENSBTAG00000010393	TRNAU1AP	100	99.652	Bos_taurus
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSCJAG00000009717	TRNAU1AP	100	99.595	Callithrix_jacchus
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSCAFG00000011735	TRNAU1AP	100	98.955	Canis_familiaris
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSCAFG00020023584	TRNAU1AP	100	98.955	Canis_lupus_dingo
ENSCHIG00000023215	TRNAU1AP	100	99.190	ENSTSYG00000003506	TRNAU1AP	100	99.190	Carlito_syrichta
ENSCHIG00000023215	TRNAU1AP	100	98.785	ENSCPOG00000001925	TRNAU1AP	100	98.785	Cavia_porcellus
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSCCAG00000037506	TRNAU1AP	100	99.595	Cebus_capucinus
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSCATG00000044617	TRNAU1AP	100	99.595	Cercocebus_atys
ENSCHIG00000023215	TRNAU1AP	100	97.976	ENSCLAG00000008223	TRNAU1AP	100	97.976	Chinchilla_lanigera
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSCSAG00000001014	TRNAU1AP	100	98.955	Chlorocebus_sabaeus
ENSCHIG00000023215	TRNAU1AP	95	94.526	ENSCPBG00000000121	TRNAU1AP	100	94.526	Chrysemys_picta_bellii
ENSCHIG00000023215	TRNAU1AP	99	44.681	ENSCSAVG00000011781	-	98	44.681	Ciona_savignyi
ENSCHIG00000023215	TRNAU1AP	100	87.456	ENSCANG00000041949	TRNAU1AP	100	98.870	Colobus_angolensis_palliatus
ENSCHIG00000023215	TRNAU1AP	100	99.190	ENSCGRG00001004713	Trnau1ap	100	99.190	Cricetulus_griseus_chok1gshd
ENSCHIG00000023215	TRNAU1AP	100	99.190	ENSCGRG00000014532	Trnau1ap	100	99.190	Cricetulus_griseus_crigri
ENSCHIG00000023215	TRNAU1AP	98	58.000	ENSCSEG00000006663	trnau1apa	94	58.607	Cynoglossus_semilaevis
ENSCHIG00000023215	TRNAU1AP	97	57.483	ENSCVAG00000018069	trnau1apa	94	58.974	Cyprinodon_variegatus
ENSCHIG00000023215	TRNAU1AP	95	53.571	ENSDARG00000101323	trnau1apa	88	51.957	Danio_rerio
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSDNOG00000033009	TRNAU1AP	100	98.955	Dasypus_novemcinctus
ENSCHIG00000023215	TRNAU1AP	67	77.083	ENSDNOG00000047959	-	97	77.540	Dasypus_novemcinctus
ENSCHIG00000023215	TRNAU1AP	99	91.259	ENSDORG00000006349	Trnau1ap	100	99.567	Dipodomys_ordii
ENSCHIG00000023215	TRNAU1AP	96	51.493	FBgn0031607	CG15440	51	52.601	Drosophila_melanogaster
ENSCHIG00000023215	TRNAU1AP	85	93.878	ENSETEG00000012594	TRNAU1AP	100	93.878	Echinops_telfairi
ENSCHIG00000023215	TRNAU1AP	55	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSEASG00005010062	TRNAU1AP	100	99.595	Equus_asinus_asinus
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSECAG00000012980	TRNAU1AP	100	99.595	Equus_caballus
ENSCHIG00000023215	TRNAU1AP	96	70.526	ENSELUG00000022790	-	96	64.773	Esox_lucius
ENSCHIG00000023215	TRNAU1AP	96	62.718	ENSELUG00000017686	trnau1apa	94	62.369	Esox_lucius
ENSCHIG00000023215	TRNAU1AP	100	99.303	ENSFCAG00000013401	TRNAU1AP	100	99.303	Felis_catus
ENSCHIG00000023215	TRNAU1AP	95	93.431	ENSFALG00000001371	TRNAU1AP	100	93.431	Ficedula_albicollis
ENSCHIG00000023215	TRNAU1AP	100	98.785	ENSFDAG00000018599	TRNAU1AP	100	98.785	Fukomys_damarensis
ENSCHIG00000023215	TRNAU1AP	79	60.408	ENSFHEG00000018232	trnau1apa	86	56.371	Fundulus_heteroclitus
ENSCHIG00000023215	TRNAU1AP	95	53.497	ENSGMOG00000016508	trnau1apa	93	54.577	Gadus_morhua
ENSCHIG00000023215	TRNAU1AP	100	93.031	ENSGALG00000001310	-	100	93.031	Gallus_gallus
ENSCHIG00000023215	TRNAU1AP	68	49.765	ENSGALG00000012721	C2H6orf52	95	45.174	Gallus_gallus
ENSCHIG00000023215	TRNAU1AP	78	57.983	ENSGAFG00000004928	trnau1apa	90	58.824	Gambusia_affinis
ENSCHIG00000023215	TRNAU1AP	98	59.932	ENSGACG00000001443	trnau1apa	95	59.589	Gasterosteus_aculeatus
ENSCHIG00000023215	TRNAU1AP	95	94.891	ENSGAGG00000004940	TRNAU1AP	100	94.891	Gopherus_agassizii
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSGGOG00000003511	TRNAU1AP	100	99.595	Gorilla_gorilla
ENSCHIG00000023215	TRNAU1AP	99	57.468	ENSHBUG00000002510	trnau1apa	99	58.824	Haplochromis_burtoni
ENSCHIG00000023215	TRNAU1AP	100	97.976	ENSHGLG00000010380	TRNAU1AP	100	97.976	Heterocephalus_glaber_female
ENSCHIG00000023215	TRNAU1AP	100	95.470	ENSHGLG00100012699	TRNAU1AP	100	95.470	Heterocephalus_glaber_male
ENSCHIG00000023215	TRNAU1AP	99	56.766	ENSHCOG00000014770	trnau1apa	97	66.429	Hippocampus_comes
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSSTOG00000000079	TRNAU1AP	100	99.595	Ictidomys_tridecemlineatus
ENSCHIG00000023215	TRNAU1AP	100	98.785	ENSJJAG00000010128	Trnau1ap	100	98.785	Jaculus_jaculus
ENSCHIG00000023215	TRNAU1AP	95	59.862	ENSKMAG00000001230	trnau1apa	93	58.131	Kryptolebias_marmoratus
ENSCHIG00000023215	TRNAU1AP	95	60.751	ENSLBEG00000011683	trnau1apa	93	59.864	Labrus_bergylta
ENSCHIG00000023215	TRNAU1AP	99	72.982	ENSLACG00000005541	TRNAU1AP	99	72.982	Latimeria_chalumnae
ENSCHIG00000023215	TRNAU1AP	99	71.678	ENSLOCG00000004041	trnau1apa	99	70.629	Lepisosteus_oculatus
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSLAFG00000007628	TRNAU1AP	100	98.955	Loxodonta_africana
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSMFAG00000043751	TRNAU1AP	100	98.955	Macaca_fascicularis
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSMMUG00000006561	TRNAU1AP	100	99.595	Macaca_mulatta
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSMNEG00000044201	TRNAU1AP	100	99.595	Macaca_nemestrina
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSMLEG00000015649	TRNAU1AP	100	98.955	Mandrillus_leucophaeus
ENSCHIG00000023215	TRNAU1AP	99	58.387	ENSMAMG00000001247	trnau1apa	99	58.219	Mastacembelus_armatus
ENSCHIG00000023215	TRNAU1AP	99	58.416	ENSMZEG00005017722	trnau1apa	99	59.801	Maylandia_zebra
ENSCHIG00000023215	TRNAU1AP	97	92.806	ENSMGAG00000002105	TRNAU1AP	100	92.806	Meleagris_gallopavo
ENSCHIG00000023215	TRNAU1AP	100	99.190	ENSMICG00000008386	TRNAU1AP	100	99.190	Microcebus_murinus
ENSCHIG00000023215	TRNAU1AP	100	98.785	ENSMOCG00000011189	Trnau1ap	100	98.785	Microtus_ochrogaster
ENSCHIG00000023215	TRNAU1AP	95	57.721	ENSMMOG00000012107	trnau1apa	92	57.721	Mola_mola
ENSCHIG00000023215	TRNAU1AP	100	94.774	ENSMODG00000010927	TRNAU1AP	100	94.774	Monodelphis_domestica
ENSCHIG00000023215	TRNAU1AP	99	58.900	ENSMALG00000016778	trnau1apa	99	56.311	Monopterus_albus
ENSCHIG00000023215	TRNAU1AP	100	98.785	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSCHIG00000023215	TRNAU1AP	100	98.785	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSCHIG00000023215	TRNAU1AP	100	99.190	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSCHIG00000023215	TRNAU1AP	100	98.381	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSCHIG00000023215	TRNAU1AP	100	99.303	ENSMPUG00000015511	TRNAU1AP	100	99.303	Mustela_putorius_furo
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSMLUG00000012586	TRNAU1AP	100	98.955	Myotis_lucifugus
ENSCHIG00000023215	TRNAU1AP	100	97.571	ENSNGAG00000015881	Trnau1ap	100	97.571	Nannospalax_galili
ENSCHIG00000023215	TRNAU1AP	100	56.419	ENSNBRG00000001758	trnau1apa	99	56.419	Neolamprologus_brichardi
ENSCHIG00000023215	TRNAU1AP	100	99.303	ENSNLEG00000009822	TRNAU1AP	100	99.303	Nomascus_leucogenys
ENSCHIG00000023215	TRNAU1AP	97	93.525	ENSMEUG00000006117	TRNAU1AP	100	93.525	Notamacropus_eugenii
ENSCHIG00000023215	TRNAU1AP	82	97.273	ENSOPRG00000007084	-	69	97.273	Ochotona_princeps
ENSCHIG00000023215	TRNAU1AP	100	98.381	ENSODEG00000002970	TRNAU1AP	100	98.381	Octodon_degus
ENSCHIG00000023215	TRNAU1AP	80	59.259	ENSONIG00000004715	trnau1apa	95	59.504	Oreochromis_niloticus
ENSCHIG00000023215	TRNAU1AP	99	74.126	ENSOANG00000005325	-	99	74.126	Ornithorhynchus_anatinus
ENSCHIG00000023215	TRNAU1AP	100	77.083	ENSOCUG00000002353	-	100	77.083	Oryctolagus_cuniculus
ENSCHIG00000023215	TRNAU1AP	89	76.953	ENSOCUG00000006834	-	100	75.000	Oryctolagus_cuniculus
ENSCHIG00000023215	TRNAU1AP	100	97.213	ENSOCUG00000011704	-	100	97.213	Oryctolagus_cuniculus
ENSCHIG00000023215	TRNAU1AP	98	58.865	ENSORLG00000010428	trnau1apa	95	57.042	Oryzias_latipes
ENSCHIG00000023215	TRNAU1AP	98	58.020	ENSORLG00020000926	trnau1ap	95	56.849	Oryzias_latipes_hni
ENSCHIG00000023215	TRNAU1AP	98	58.020	ENSORLG00015009858	trnau1ap	95	56.849	Oryzias_latipes_hsok
ENSCHIG00000023215	TRNAU1AP	98	59.044	ENSOMEG00000007873	trnau1apa	95	56.164	Oryzias_melastigma
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSOGAG00000002274	TRNAU1AP	100	98.955	Otolemur_garnettii
ENSCHIG00000023215	TRNAU1AP	100	100.000	ENSOARG00000002843	TRNAU1AP	100	100.000	Ovis_aries
ENSCHIG00000023215	TRNAU1AP	100	99.303	ENSPPAG00000033927	TRNAU1AP	100	99.303	Pan_paniscus
ENSCHIG00000023215	TRNAU1AP	100	99.303	ENSPPRG00000004416	TRNAU1AP	100	99.303	Panthera_pardus
ENSCHIG00000023215	TRNAU1AP	100	99.303	ENSPTIG00000016677	TRNAU1AP	100	99.303	Panthera_tigris_altaica
ENSCHIG00000023215	TRNAU1AP	93	80.443	ENSPTRG00000000434	-	97	78.967	Pan_troglodytes
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSPANG00000016019	TRNAU1AP	100	99.595	Papio_anubis
ENSCHIG00000023215	TRNAU1AP	94	74.468	ENSPKIG00000022205	-	93	77.528	Paramormyrops_kingsleyae
ENSCHIG00000023215	TRNAU1AP	95	59.717	ENSPKIG00000015511	trnau1apa	92	57.951	Paramormyrops_kingsleyae
ENSCHIG00000023215	TRNAU1AP	95	94.891	ENSPSIG00000006864	TRNAU1AP	100	94.891	Pelodiscus_sinensis
ENSCHIG00000023215	TRNAU1AP	94	61.029	ENSPMGG00000023893	trnau1apa	91	60.148	Periophthalmus_magnuspinnatus
ENSCHIG00000023215	TRNAU1AP	100	98.785	ENSPEMG00000007877	Trnau1ap	100	98.785	Peromyscus_maniculatus_bairdii
ENSCHIG00000023215	TRNAU1AP	60	59.659	ENSPMAG00000000592	trnau1apa	97	59.659	Petromyzon_marinus
ENSCHIG00000023215	TRNAU1AP	78	60.987	ENSPMAG00000005934	trnau1apa	96	60.185	Petromyzon_marinus
ENSCHIG00000023215	TRNAU1AP	95	56.597	ENSPFOG00000008100	trnau1apa	93	57.292	Poecilia_formosa
ENSCHIG00000023215	TRNAU1AP	91	56.318	ENSPLAG00000010236	trnau1apa	93	57.040	Poecilia_latipinna
ENSCHIG00000023215	TRNAU1AP	96	55.517	ENSPMEG00000016387	trnau1apa	92	56.207	Poecilia_mexicana
ENSCHIG00000023215	TRNAU1AP	93	53.532	ENSPREG00000019821	trnau1apa	86	64.286	Poecilia_reticulata
ENSCHIG00000023215	TRNAU1AP	100	90.688	ENSPPYG00000001639	-	100	90.688	Pongo_abelii
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSPCOG00000027712	-	100	98.955	Propithecus_coquereli
ENSCHIG00000023215	TRNAU1AP	98	95.041	ENSPCOG00000023470	-	100	95.041	Propithecus_coquereli
ENSCHIG00000023215	TRNAU1AP	100	99.303	ENSPVAG00000017214	TRNAU1AP	100	99.303	Pteropus_vampyrus
ENSCHIG00000023215	TRNAU1AP	99	57.468	ENSPNYG00000010130	trnau1apa	99	58.824	Pundamilia_nyererei
ENSCHIG00000023215	TRNAU1AP	95	55.477	ENSPNAG00000024905	trnau1apa	91	54.676	Pygocentrus_nattereri
ENSCHIG00000023215	TRNAU1AP	94	90.406	ENSRNOG00000055344	Trnau1ap	92	90.406	Rattus_norvegicus
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSRBIG00000029083	TRNAU1AP	100	99.595	Rhinopithecus_bieti
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSRROG00000029128	TRNAU1AP	100	99.595	Rhinopithecus_roxellana
ENSCHIG00000023215	TRNAU1AP	100	99.595	ENSSBOG00000021299	TRNAU1AP	100	99.595	Saimiri_boliviensis_boliviensis
ENSCHIG00000023215	TRNAU1AP	100	94.077	ENSSHAG00000008108	TRNAU1AP	100	94.077	Sarcophilus_harrisii
ENSCHIG00000023215	TRNAU1AP	99	53.205	ENSSMAG00000020851	trnau1apa	99	56.494	Scophthalmus_maximus
ENSCHIG00000023215	TRNAU1AP	85	71.111	ENSSDUG00000011734	trnau1apa	94	57.483	Seriola_dumerili
ENSCHIG00000023215	TRNAU1AP	95	60.851	ENSSLDG00000012101	trnau1apa	92	60.851	Seriola_lalandi_dorsalis
ENSCHIG00000023215	TRNAU1AP	97	97.842	ENSSARG00000007536	TRNAU1AP	100	97.842	Sorex_araneus
ENSCHIG00000023215	TRNAU1AP	99	86.014	ENSSPUG00000010400	-	100	86.014	Sphenodon_punctatus
ENSCHIG00000023215	TRNAU1AP	61	81.818	ENSSPUG00000010415	-	100	81.818	Sphenodon_punctatus
ENSCHIG00000023215	TRNAU1AP	99	57.419	ENSSPAG00000005029	trnau1apa	99	57.419	Stegastes_partitus
ENSCHIG00000023215	TRNAU1AP	100	99.303	ENSSSCG00000030284	TRNAU1AP	100	99.303	Sus_scrofa
ENSCHIG00000023215	TRNAU1AP	97	93.885	ENSTGUG00000000735	-	100	93.885	Taeniopygia_guttata
ENSCHIG00000023215	TRNAU1AP	68	53.571	ENSTGUG00000005908	-	100	53.571	Taeniopygia_guttata
ENSCHIG00000023215	TRNAU1AP	99	58.553	ENSTRUG00000003352	trnau1apa	99	57.895	Takifugu_rubripes
ENSCHIG00000023215	TRNAU1AP	98	57.096	ENSTNIG00000006129	trnau1apa	98	57.096	Tetraodon_nigroviridis
ENSCHIG00000023215	TRNAU1AP	85	87.347	ENSTBEG00000008049	-	100	87.347	Tupaia_belangeri
ENSCHIG00000023215	TRNAU1AP	100	98.955	ENSTTRG00000001854	TRNAU1AP	100	98.955	Tursiops_truncatus
ENSCHIG00000023215	TRNAU1AP	95	98.905	ENSUAMG00000008789	TRNAU1AP	100	98.905	Ursus_americanus
ENSCHIG00000023215	TRNAU1AP	100	98.606	ENSUMAG00000011068	TRNAU1AP	100	98.606	Ursus_maritimus
ENSCHIG00000023215	TRNAU1AP	100	88.356	ENSVPAG00000006778	TRNAU1AP	100	88.356	Vicugna_pacos
ENSCHIG00000023215	TRNAU1AP	99	97.183	ENSVVUG00000012518	TRNAU1AP	93	97.183	Vulpes_vulpes
ENSCHIG00000023215	TRNAU1AP	95	55.556	ENSXMAG00000017361	trnau1apa	93	57.292	Xiphophorus_maculatus