EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000023251 (Gene tree)
Gene ID: 102182945
Gene Symbol: BMS1
Alias: BMS1L|KIAA0187
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 45343 bases
Position: chr28:32278502-32323844
Accession: 102182945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000027245	AARP2CN	PF08142.12	1.7e-32	1	1
ENSCHIP00000027256	AARP2CN	PF08142.12	1.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000035124	BMS1-202	9317	XM_005699025	ENSCHIP00000027256	1285 (aa)	XP_005699082	UPI0008465BE2
ENSCHIT00000035113	BMS1-201	9053	XM_018042271	ENSCHIP00000027245	1285 (aa)	XP_017897760	UPI0008465BE2

Gene Model

Click here to download ENSCHIG00000023251's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023251	BMS1	100	88.647	ENSG00000165733	BMS1	100	88.569	Homo_sapiens
ENSCHIG00000023251	BMS1	70	73.776	ENSAPOG00000002296	bms1	99	59.551	Acanthochromis_polyacanthus
ENSCHIG00000023251	BMS1	99	90.613	ENSAMEG00000016834	BMS1	99	90.217	Ailuropoda_melanoleuca
ENSCHIG00000023251	BMS1	76	81.199	ENSACIG00000002588	bms1	85	78.500	Amphilophus_citrinellus
ENSCHIG00000023251	BMS1	81	74.478	ENSAOCG00000018088	bms1	99	61.598	Amphiprion_ocellaris
ENSCHIG00000023251	BMS1	81	74.478	ENSAPEG00000014673	bms1	58	61.673	Amphiprion_percula
ENSCHIG00000023251	BMS1	81	74.537	ENSATEG00000023465	bms1	56	63.324	Anabas_testudineus
ENSCHIG00000023251	BMS1	95	73.080	ENSAPLG00000003759	BMS1	100	72.823	Anas_platyrhynchos
ENSCHIG00000023251	BMS1	100	70.814	ENSACAG00000004537	-	100	70.244	Anolis_carolinensis
ENSCHIG00000023251	BMS1	100	87.956	ENSANAG00000023432	BMS1	100	87.723	Aotus_nancymaae
ENSCHIG00000023251	BMS1	87	68.952	ENSACLG00000001294	bms1	54	66.924	Astatotilapia_calliptera
ENSCHIG00000023251	BMS1	100	98.289	ENSBTAG00000012878	BMS1	100	98.289	Bos_taurus
ENSCHIG00000023251	BMS1	81	52.415	WBGene00022021	Y61A9LA.10	99	52.235	Caenorhabditis_elegans
ENSCHIG00000023251	BMS1	100	88.500	ENSCJAG00000021705	BMS1	100	87.879	Callithrix_jacchus
ENSCHIG00000023251	BMS1	99	91.206	ENSCAFG00000007114	BMS1	99	90.654	Canis_familiaris
ENSCHIG00000023251	BMS1	99	91.206	ENSCAFG00020025282	BMS1	99	90.654	Canis_lupus_dingo
ENSCHIG00000023251	BMS1	99	82.109	ENSCAPG00000008652	BMS1	99	81.484	Cavia_aperea
ENSCHIG00000023251	BMS1	99	86.172	ENSCPOG00000000502	BMS1	99	85.547	Cavia_porcellus
ENSCHIG00000023251	BMS1	100	73.447	ENSCCAG00000024969	-	100	73.214	Cebus_capucinus
ENSCHIG00000023251	BMS1	90	66.494	ENSCATG00000008695	-	97	66.262	Cercocebus_atys
ENSCHIG00000023251	BMS1	100	89.044	ENSCATG00000030625	-	100	88.656	Cercocebus_atys
ENSCHIG00000023251	BMS1	99	86.183	ENSCLAG00000002446	BMS1	99	85.234	Chinchilla_lanigera
ENSCHIG00000023251	BMS1	100	89.355	ENSCSAG00000011118	BMS1	100	88.967	Chlorocebus_sabaeus
ENSCHIG00000023251	BMS1	100	87.044	ENSCHOG00000011055	BMS1	100	87.975	Choloepus_hoffmanni
ENSCHIG00000023251	BMS1	99	74.410	ENSCPBG00000025581	BMS1	99	73.268	Chrysemys_picta_bellii
ENSCHIG00000023251	BMS1	79	59.662	ENSCING00000003181	-	99	59.662	Ciona_intestinalis
ENSCHIG00000023251	BMS1	67	56.627	ENSCSAVG00000004113	-	88	56.075	Ciona_savignyi
ENSCHIG00000023251	BMS1	100	89.977	ENSCANG00000011609	BMS1	100	89.122	Colobus_angolensis_palliatus
ENSCHIG00000023251	BMS1	99	85.303	ENSCGRG00001019461	Bms1	99	85.303	Cricetulus_griseus_chok1gshd
ENSCHIG00000023251	BMS1	99	85.303	ENSCGRG00000009016	Bms1	99	85.303	Cricetulus_griseus_crigri
ENSCHIG00000023251	BMS1	81	73.131	ENSCSEG00000002469	bms1	99	61.905	Cynoglossus_semilaevis
ENSCHIG00000023251	BMS1	85	69.712	ENSCVAG00000008371	bms1	99	68.665	Cyprinodon_variegatus
ENSCHIG00000023251	BMS1	82	73.165	ENSDARG00000054154	bms1	99	62.355	Danio_rerio
ENSCHIG00000023251	BMS1	100	89.637	ENSDNOG00000015761	BMS1	100	89.714	Dasypus_novemcinctus
ENSCHIG00000023251	BMS1	99	87.082	ENSDORG00000002982	Bms1	99	86.615	Dipodomys_ordii
ENSCHIG00000023251	BMS1	75	61.067	FBgn0036686	CG7728	90	59.169	Drosophila_melanogaster
ENSCHIG00000023251	BMS1	85	81.250	ENSETEG00000009554	BMS1	91	81.250	Echinops_telfairi
ENSCHIG00000023251	BMS1	100	91.142	ENSEASG00005006894	BMS1	100	91.608	Equus_asinus_asinus
ENSCHIG00000023251	BMS1	100	91.693	ENSECAG00000001358	BMS1	100	91.608	Equus_caballus
ENSCHIG00000023251	BMS1	89	67.173	ENSELUG00000001756	bms1	94	67.657	Esox_lucius
ENSCHIG00000023251	BMS1	99	90.810	ENSFCAG00000011220	BMS1	99	90.576	Felis_catus
ENSCHIG00000023251	BMS1	99	71.668	ENSFALG00000006882	BMS1	99	72.167	Ficedula_albicollis
ENSCHIG00000023251	BMS1	99	84.681	ENSFDAG00000001422	BMS1	99	84.699	Fukomys_damarensis
ENSCHIG00000023251	BMS1	85	70.921	ENSFHEG00000003367	bms1	99	67.939	Fundulus_heteroclitus
ENSCHIG00000023251	BMS1	89	66.399	ENSGMOG00000000718	bms1	88	75.245	Gadus_morhua
ENSCHIG00000023251	BMS1	100	72.040	ENSGALG00000002624	BMS1	99	73.006	Gallus_gallus
ENSCHIG00000023251	BMS1	99	59.276	ENSGACG00000015334	bms1	99	59.304	Gasterosteus_aculeatus
ENSCHIG00000023251	BMS1	100	73.620	ENSGAGG00000003467	BMS1	100	72.960	Gopherus_agassizii
ENSCHIG00000023251	BMS1	86	69.076	ENSHBUG00000022628	bms1	54	66.924	Haplochromis_burtoni
ENSCHIG00000023251	BMS1	99	85.547	ENSHGLG00000000477	BMS1	99	84.453	Heterocephalus_glaber_female
ENSCHIG00000023251	BMS1	99	85.625	ENSHGLG00100002176	BMS1	99	84.531	Heterocephalus_glaber_male
ENSCHIG00000023251	BMS1	89	67.532	ENSHCOG00000017604	bms1	98	66.472	Hippocampus_comes
ENSCHIG00000023251	BMS1	99	61.912	ENSIPUG00000017855	bms1	94	73.589	Ictalurus_punctatus
ENSCHIG00000023251	BMS1	99	88.378	ENSSTOG00000015063	BMS1	99	88.066	Ictidomys_tridecemlineatus
ENSCHIG00000023251	BMS1	99	85.391	ENSJJAG00000017328	Bms1	99	85.870	Jaculus_jaculus
ENSCHIG00000023251	BMS1	56	65.613	ENSKMAG00000021982	bms1	96	66.279	Kryptolebias_marmoratus
ENSCHIG00000023251	BMS1	81	72.018	ENSLBEG00000028208	bms1	99	60.277	Labrus_bergylta
ENSCHIG00000023251	BMS1	99	61.982	ENSLACG00000001600	BMS1	100	62.260	Latimeria_chalumnae
ENSCHIG00000023251	BMS1	83	75.676	ENSLOCG00000012914	bms1	99	63.672	Lepisosteus_oculatus
ENSCHIG00000023251	BMS1	99	88.474	ENSLAFG00000006250	BMS1	99	87.373	Loxodonta_africana
ENSCHIG00000023251	BMS1	84	88.180	ENSMFAG00000037771	BMS1	97	90.643	Macaca_fascicularis
ENSCHIG00000023251	BMS1	90	75.536	ENSMMUG00000007426	-	99	75.000	Macaca_mulatta
ENSCHIG00000023251	BMS1	85	70.394	ENSMLEG00000029084	-	97	70.119	Mandrillus_leucophaeus
ENSCHIG00000023251	BMS1	99	60.573	ENSMAMG00000020855	bms1	99	59.985	Mastacembelus_armatus
ENSCHIG00000023251	BMS1	87	68.750	ENSMZEG00005005663	bms1	54	66.924	Maylandia_zebra
ENSCHIG00000023251	BMS1	95	72.125	ENSMGAG00000001170	BMS1	99	71.772	Meleagris_gallopavo
ENSCHIG00000023251	BMS1	99	84.914	ENSMAUG00000002195	Bms1	99	84.992	Mesocricetus_auratus
ENSCHIG00000023251	BMS1	100	88.673	ENSMICG00000009977	BMS1	100	88.208	Microcebus_murinus
ENSCHIG00000023251	BMS1	99	84.153	ENSMOCG00000002038	Bms1	99	84.699	Microtus_ochrogaster
ENSCHIG00000023251	BMS1	86	68.542	ENSMMOG00000000977	bms1	97	66.286	Mola_mola
ENSCHIG00000023251	BMS1	99	78.762	ENSMODG00000001177	BMS1	99	79.355	Monodelphis_domestica
ENSCHIG00000023251	BMS1	90	67.363	ENSMALG00000009680	bms1	58	59.329	Monopterus_albus
ENSCHIG00000023251	BMS1	70	94.903	MGP_CAROLIEiJ_G0028785	-	85	94.903	Mus_caroli
ENSCHIG00000023251	BMS1	99	84.059	ENSMUSG00000030138	Bms1	99	84.448	Mus_musculus
ENSCHIG00000023251	BMS1	99	84.190	MGP_PahariEiJ_G0022539	Bms1	99	83.956	Mus_pahari
ENSCHIG00000023251	BMS1	99	83.826	MGP_SPRETEiJ_G0029816	Bms1	99	84.215	Mus_spretus
ENSCHIG00000023251	BMS1	99	91.206	ENSMPUG00000017276	BMS1	99	90.421	Mustela_putorius_furo
ENSCHIG00000023251	BMS1	100	89.760	ENSMLUG00000003260	BMS1	100	89.130	Myotis_lucifugus
ENSCHIG00000023251	BMS1	95	81.807	ENSNGAG00000015258	Bms1	99	81.990	Nannospalax_galili
ENSCHIG00000023251	BMS1	100	86.946	ENSNLEG00000015791	BMS1	100	87.179	Nomascus_leucogenys
ENSCHIG00000023251	BMS1	80	96.429	ENSOPRG00000005195	BMS1	81	96.429	Ochotona_princeps
ENSCHIG00000023251	BMS1	99	85.547	ENSODEG00000005554	BMS1	99	85.469	Octodon_degus
ENSCHIG00000023251	BMS1	89	69.082	ENSONIG00000007227	bms1	99	61.989	Oreochromis_niloticus
ENSCHIG00000023251	BMS1	100	77.054	ENSOANG00000000662	-	100	77.209	Ornithorhynchus_anatinus
ENSCHIG00000023251	BMS1	99	87.988	ENSOCUG00000005354	BMS1	99	87.510	Oryctolagus_cuniculus
ENSCHIG00000023251	BMS1	82	73.708	ENSORLG00000014655	bms1	98	68.147	Oryzias_latipes
ENSCHIG00000023251	BMS1	82	73.502	ENSORLG00020016246	bms1	92	68.567	Oryzias_latipes_hni
ENSCHIG00000023251	BMS1	82	73.138	ENSORLG00015014183	bms1	92	68.404	Oryzias_latipes_hsok
ENSCHIG00000023251	BMS1	81	75.463	ENSOMEG00000015042	bms1	55	67.171	Oryzias_melastigma
ENSCHIG00000023251	BMS1	99	89.527	ENSOGAG00000006511	BMS1	99	89.372	Otolemur_garnettii
ENSCHIG00000023251	BMS1	100	99.224	ENSOARG00000003900	BMS1	100	99.224	Ovis_aries
ENSCHIG00000023251	BMS1	100	85.004	ENSPPAG00000027837	BMS1	100	84.926	Pan_paniscus
ENSCHIG00000023251	BMS1	99	90.498	ENSPPRG00000001311	BMS1	99	90.187	Panthera_pardus
ENSCHIG00000023251	BMS1	99	88.941	ENSPTIG00000009652	BMS1	99	88.629	Panthera_tigris_altaica
ENSCHIG00000023251	BMS1	100	88.880	ENSPTRG00000002441	BMS1	100	88.802	Pan_troglodytes
ENSCHIG00000023251	BMS1	100	72.226	ENSPSIG00000006481	BMS1	99	72.125	Pelodiscus_sinensis
ENSCHIG00000023251	BMS1	99	78.115	ENSPEMG00000022467	Bms1	99	78.505	Peromyscus_maniculatus_bairdii
ENSCHIG00000023251	BMS1	95	93.960	ENSPCIG00000001339	BMS1	98	87.288	Phascolarctos_cinereus
ENSCHIG00000023251	BMS1	80	75.616	ENSPFOG00000015180	bms1	99	66.538	Poecilia_formosa
ENSCHIG00000023251	BMS1	79	75.862	ENSPMEG00000023176	bms1	93	67.118	Poecilia_mexicana
ENSCHIG00000023251	BMS1	79	76.485	ENSPREG00000002695	bms1	98	66.990	Poecilia_reticulata
ENSCHIG00000023251	BMS1	61	85.915	ENSPPYG00000002836	-	99	85.147	Pongo_abelii
ENSCHIG00000023251	BMS1	73	94.558	ENSPCAG00000014528	BMS1	77	88.327	Procavia_capensis
ENSCHIG00000023251	BMS1	95	84.584	ENSPCOG00000023834	-	100	83.723	Propithecus_coquereli
ENSCHIG00000023251	BMS1	100	87.578	ENSPVAG00000000725	BMS1	100	86.480	Pteropus_vampyrus
ENSCHIG00000023251	BMS1	86	69.156	ENSPNYG00000018866	bms1	86	67.810	Pundamilia_nyererei
ENSCHIG00000023251	BMS1	82	81.792	ENSRNOG00000006576	Bms1	100	81.973	Rattus_norvegicus
ENSCHIG00000023251	BMS1	100	87.257	ENSRROG00000040101	BMS1	100	87.257	Rhinopithecus_roxellana
ENSCHIG00000023251	BMS1	73	45.920	YPL217C	-	79	46.855	Saccharomyces_cerevisiae
ENSCHIG00000023251	BMS1	100	88.423	ENSSBOG00000035778	BMS1	100	88.578	Saimiri_boliviensis_boliviensis
ENSCHIG00000023251	BMS1	99	78.834	ENSSHAG00000005062	BMS1	99	78.528	Sarcophilus_harrisii
ENSCHIG00000023251	BMS1	99	62.780	ENSSFOG00015022313	bms1	99	62.347	Scleropages_formosus
ENSCHIG00000023251	BMS1	81	74.253	ENSSMAG00000019966	bms1	99	60.777	Scophthalmus_maximus
ENSCHIG00000023251	BMS1	88	69.854	ENSSDUG00000016875	bms1	99	61.712	Seriola_dumerili
ENSCHIG00000023251	BMS1	70	80.067	ENSSARG00000014407	BMS1	100	79.041	Sorex_araneus
ENSCHIG00000023251	BMS1	99	71.710	ENSSPUG00000014454	BMS1	99	71.906	Sphenodon_punctatus
ENSCHIG00000023251	BMS1	99	93.692	ENSSSCG00000010198	BMS1	99	94.081	Sus_scrofa
ENSCHIG00000023251	BMS1	99	72.073	ENSTGUG00000006302	-	99	72.603	Taeniopygia_guttata
ENSCHIG00000023251	BMS1	86	65.862	ENSTRUG00000008028	bms1	97	64.531	Takifugu_rubripes
ENSCHIG00000023251	BMS1	99	59.587	ENSTNIG00000006216	bms1	88	66.828	Tetraodon_nigroviridis
ENSCHIG00000023251	BMS1	60	93.878	ENSTBEG00000001673	-	63	93.836	Tupaia_belangeri
ENSCHIG00000023251	BMS1	100	92.146	ENSTTRG00000007983	BMS1	100	92.146	Tursiops_truncatus
ENSCHIG00000023251	BMS1	99	91.115	ENSUAMG00000023996	BMS1	99	90.959	Ursus_americanus
ENSCHIG00000023251	BMS1	99	91.037	ENSUMAG00000016523	BMS1	99	90.881	Ursus_maritimus
ENSCHIG00000023251	BMS1	88	87.709	ENSVPAG00000007477	BMS1	94	96.368	Vicugna_pacos
ENSCHIG00000023251	BMS1	99	91.051	ENSVVUG00000021305	BMS1	99	90.498	Vulpes_vulpes
ENSCHIG00000023251	BMS1	98	66.274	ENSXETG00000008158	bms1	99	66.255	Xenopus_tropicalis
ENSCHIG00000023251	BMS1	85	68.660	ENSXCOG00000000506	bms1	95	77.094	Xiphophorus_couchianus
ENSCHIG00000023251	BMS1	85	68.866	ENSXMAG00000014236	bms1	99	67.442	Xiphophorus_maculatus