EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000023357 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 4694 bases
Position: chr18:55291246-55295939
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000027438	Ribosomal_S6e	PF01092.19	2.4e-58	1	1
ENSCHIP00000027451	Ribosomal_S6e	PF01092.19	2.7e-48	1	1
ENSCHIP00000027448	Ribosomal_S6e	PF01092.19	1.6e-32	1	1
ENSCHIP00000027444	Ribosomal_S6e	PF01092.19	3.6e-29	1	1
ENSCHIP00000027441	Ribosomal_S6e	PF01092.19	3.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000035306	-	360	-	ENSCHIP00000027438	119 (aa)	-	UPI000D191DC8
ENSCHIT00000035312	-	267	-	ENSCHIP00000027444	88 (aa)	-	UPI000D193D9D
ENSCHIT00000035316	-	279	-	ENSCHIP00000027448	92 (aa)	-	UPI000D190BE7
ENSCHIT00000035309	-	285	-	ENSCHIP00000027441	94 (aa)	-	UPI000D195A28
ENSCHIT00000035319	-	345	-	ENSCHIP00000027451	114 (aa)	-	UPI000D18DF5B

Gene Model

Click here to download ENSCHIG00000023357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000023357	-	82	64.474	ENSCHIG00000016884	-	97	64.474
ENSCHIG00000023357	-	100	79.661	ENSCHIG00000023715	-	100	79.661

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023357	-	97	97.391	ENSG00000137154	RPS6	74	77.612	Homo_sapiens
ENSCHIG00000023357	-	97	80.000	ENSAMEG00000005472	-	55	80.000	Ailuropoda_melanoleuca
ENSCHIG00000023357	-	87	82.692	ENSAMEG00000019976	-	99	82.692	Ailuropoda_melanoleuca
ENSCHIG00000023357	-	99	73.451	ENSANAG00000008532	-	85	91.935	Aotus_nancymaae
ENSCHIG00000023357	-	92	91.358	ENSANAG00000022665	-	59	91.358	Aotus_nancymaae
ENSCHIG00000023357	-	100	84.000	ENSBTAG00000026063	-	100	84.000	Bos_taurus
ENSCHIG00000023357	-	73	100.000	ENSCJAG00000047898	-	88	100.000	Callithrix_jacchus
ENSCHIG00000023357	-	78	92.754	ENSCJAG00000047335	-	70	92.754	Callithrix_jacchus
ENSCHIG00000023357	-	97	97.391	ENSCJAG00000046081	-	56	97.391	Callithrix_jacchus
ENSCHIG00000023357	-	67	69.492	ENSCAFG00000030688	-	89	56.471	Canis_familiaris
ENSCHIG00000023357	-	93	89.024	ENSCAFG00020000346	-	92	89.024	Canis_lupus_dingo
ENSCHIG00000023357	-	93	79.268	ENSCAFG00020021435	-	83	79.268	Canis_lupus_dingo
ENSCHIG00000023357	-	93	95.122	ENSCAFG00020023417	-	78	95.122	Canis_lupus_dingo
ENSCHIG00000023357	-	78	74.026	ENSCAFG00020016382	-	68	82.192	Canis_lupus_dingo
ENSCHIG00000023357	-	93	87.952	ENSTSYG00000033950	-	51	80.000	Carlito_syrichta
ENSCHIG00000023357	-	93	85.586	ENSTSYG00000037331	-	76	80.303	Carlito_syrichta
ENSCHIG00000023357	-	77	79.412	ENSTSYG00000035084	-	75	79.412	Carlito_syrichta
ENSCHIG00000023357	-	100	82.609	ENSCCAG00000034887	-	100	82.609	Cebus_capucinus
ENSCHIG00000023357	-	89	94.118	ENSCCAG00000027404	-	79	94.118	Cebus_capucinus
ENSCHIG00000023357	-	81	95.775	ENSCCAG00000012218	-	75	95.775	Cebus_capucinus
ENSCHIG00000023357	-	100	91.228	ENSCCAG00000027222	-	100	91.228	Cebus_capucinus
ENSCHIG00000023357	-	88	93.506	ENSCCAG00000024337	-	80	93.506	Cebus_capucinus
ENSCHIG00000023357	-	86	93.421	ENSCCAG00000029547	-	92	90.244	Cebus_capucinus
ENSCHIG00000023357	-	97	97.391	ENSCATG00000034999	RPS6	51	100.000	Cercocebus_atys
ENSCHIG00000023357	-	99	90.265	ENSCANG00000026175	-	99	90.265	Colobus_angolensis_palliatus
ENSCHIG00000023357	-	99	94.690	ENSCANG00000030897	-	99	94.690	Colobus_angolensis_palliatus
ENSCHIG00000023357	-	97	92.174	ENSCANG00000020897	-	99	90.000	Colobus_angolensis_palliatus
ENSCHIG00000023357	-	97	97.391	ENSCANG00000016699	-	74	77.612	Colobus_angolensis_palliatus
ENSCHIG00000023357	-	99	91.150	ENSCANG00000028062	-	99	91.150	Colobus_angolensis_palliatus
ENSCHIG00000023357	-	78	85.507	ENSCGRG00001016512	-	83	85.507	Cricetulus_griseus_chok1gshd
ENSCHIG00000023357	-	97	97.391	ENSCGRG00001022609	Rps6	51	97.391	Cricetulus_griseus_chok1gshd
ENSCHIG00000023357	-	83	98.947	ENSCGRG00000004351	-	69	98.947	Cricetulus_griseus_crigri
ENSCHIG00000023357	-	78	85.507	ENSCGRG00000009880	-	83	85.507	Cricetulus_griseus_crigri
ENSCHIG00000023357	-	100	59.200	ENSDNOG00000007241	-	58	59.200	Dasypus_novemcinctus
ENSCHIG00000023357	-	99	63.559	ENSETEG00000018993	-	59	63.559	Echinops_telfairi
ENSCHIG00000023357	-	92	71.605	ENSEASG00005022631	-	79	71.605	Equus_asinus_asinus
ENSCHIG00000023357	-	92	71.605	ENSECAG00000032176	-	79	71.605	Equus_caballus
ENSCHIG00000023357	-	99	49.600	ENSECAG00000021587	-	92	49.600	Equus_caballus
ENSCHIG00000023357	-	80	87.143	ENSFCAG00000026193	-	93	87.143	Felis_catus
ENSCHIG00000023357	-	100	84.783	ENSFCAG00000023806	-	92	84.783	Felis_catus
ENSCHIG00000023357	-	78	89.855	ENSFCAG00000023109	-	73	89.855	Felis_catus
ENSCHIG00000023357	-	77	85.294	ENSGGOG00000039679	-	89	85.294	Gorilla_gorilla
ENSCHIG00000023357	-	83	76.316	ENSGGOG00000040597	-	94	77.632	Gorilla_gorilla
ENSCHIG00000023357	-	92	82.569	ENSJJAG00000011119	-	51	82.569	Jaculus_jaculus
ENSCHIG00000023357	-	98	78.632	ENSLAFG00000029118	-	96	78.632	Loxodonta_africana
ENSCHIG00000023357	-	97	97.391	ENSMFAG00000044377	-	70	70.690	Macaca_fascicularis
ENSCHIG00000023357	-	93	90.090	ENSMFAG00000030864	-	72	90.090	Macaca_fascicularis
ENSCHIG00000023357	-	90	86.408	ENSMMUG00000007949	-	73	86.408	Macaca_mulatta
ENSCHIG00000023357	-	99	94.690	ENSMNEG00000036926	-	99	94.690	Macaca_nemestrina
ENSCHIG00000023357	-	95	89.381	ENSMLEG00000039052	-	100	85.437	Mandrillus_leucophaeus
ENSCHIG00000023357	-	75	89.394	ENSMAUG00000018263	-	100	89.394	Mesocricetus_auratus
ENSCHIG00000023357	-	99	88.333	ENSMAUG00000016545	-	94	86.842	Mesocricetus_auratus
ENSCHIG00000023357	-	93	92.683	ENSMICG00000049138	-	77	92.683	Microcebus_murinus
ENSCHIG00000023357	-	62	96.491	ENSMICG00000049299	-	63	96.491	Microcebus_murinus
ENSCHIG00000023357	-	99	84.956	ENSMICG00000046250	-	99	84.956	Microcebus_murinus
ENSCHIG00000023357	-	97	85.217	ENSMICG00000044997	-	90	95.775	Microcebus_murinus
ENSCHIG00000023357	-	99	82.301	ENSMICG00000038120	-	99	82.301	Microcebus_murinus
ENSCHIG00000023357	-	93	93.902	ENSMICG00000027344	-	96	93.902	Microcebus_murinus
ENSCHIG00000023357	-	77	91.176	ENSMICG00000049489	-	86	91.176	Microcebus_murinus
ENSCHIG00000023357	-	83	74.747	ENSMODG00000024014	-	95	74.747	Monodelphis_domestica
ENSCHIG00000023357	-	85	81.188	ENSMPUG00000016013	-	88	81.188	Mustela_putorius_furo
ENSCHIG00000023357	-	70	84.375	ENSMLUG00000029738	-	100	84.375	Myotis_lucifugus
ENSCHIG00000023357	-	99	88.496	ENSNLEG00000026926	-	99	88.496	Nomascus_leucogenys
ENSCHIG00000023357	-	99	78.761	ENSNLEG00000031450	-	99	78.761	Nomascus_leucogenys
ENSCHIG00000023357	-	95	97.345	ENSOPRG00000012290	-	80	97.345	Ochotona_princeps
ENSCHIG00000023357	-	93	92.683	ENSODEG00000017464	-	76	92.683	Octodon_degus
ENSCHIG00000023357	-	93	79.268	ENSODEG00000000583	-	75	79.268	Octodon_degus
ENSCHIG00000023357	-	73	92.188	ENSODEG00000005388	-	76	92.188	Octodon_degus
ENSCHIG00000023357	-	97	96.522	ENSOARG00000019837	-	56	96.522	Ovis_aries
ENSCHIG00000023357	-	98	90.598	ENSOARG00000005717	-	60	90.598	Ovis_aries
ENSCHIG00000023357	-	99	84.071	ENSPPAG00000027144	-	99	84.071	Pan_paniscus
ENSCHIG00000023357	-	99	81.416	ENSPPAG00000041954	-	99	81.416	Pan_paniscus
ENSCHIG00000023357	-	93	80.488	ENSPPRG00000008414	-	88	80.488	Panthera_pardus
ENSCHIG00000023357	-	93	78.302	ENSPPRG00000009217	-	96	78.302	Panthera_pardus
ENSCHIG00000023357	-	95	72.566	ENSPPRG00000023888	-	86	72.566	Panthera_pardus
ENSCHIG00000023357	-	70	78.125	ENSPPRG00000010031	-	78	79.688	Panthera_pardus
ENSCHIG00000023357	-	68	79.365	ENSPPRG00000008618	-	90	79.365	Panthera_pardus
ENSCHIG00000023357	-	73	90.625	ENSPPRG00000024159	-	79	90.625	Panthera_pardus
ENSCHIG00000023357	-	97	71.304	ENSPTIG00000009305	-	93	65.600	Panthera_tigris_altaica
ENSCHIG00000023357	-	93	79.268	ENSPTIG00000015329	-	86	79.268	Panthera_tigris_altaica
ENSCHIG00000023357	-	71	96.923	ENSPTIG00000003205	-	63	96.923	Panthera_tigris_altaica
ENSCHIG00000023357	-	92	88.889	ENSPTIG00000005890	-	91	88.889	Panthera_tigris_altaica
ENSCHIG00000023357	-	95	91.667	ENSPTRG00000048333	-	94	91.667	Pan_troglodytes
ENSCHIG00000023357	-	99	84.071	ENSPTRG00000050726	-	99	84.071	Pan_troglodytes
ENSCHIG00000023357	-	93	73.171	ENSPANG00000033333	-	66	80.000	Papio_anubis
ENSCHIG00000023357	-	80	82.857	ENSPCIG00000009025	-	88	82.857	Phascolarctos_cinereus
ENSCHIG00000023357	-	82	82.895	ENSPCIG00000009027	-	98	84.810	Phascolarctos_cinereus
ENSCHIG00000023357	-	71	81.538	ENSPCIG00000003624	-	76	77.143	Phascolarctos_cinereus
ENSCHIG00000023357	-	75	96.970	ENSPCOG00000018578	-	85	96.970	Propithecus_coquereli
ENSCHIG00000023357	-	99	82.301	ENSPCOG00000016415	-	99	82.301	Propithecus_coquereli
ENSCHIG00000023357	-	91	86.538	ENSPCOG00000023650	-	69	86.538	Propithecus_coquereli
ENSCHIG00000023357	-	50	100.000	ENSPCOG00000019415	-	61	65.854	Propithecus_coquereli
ENSCHIG00000023357	-	99	82.301	ENSPCOG00000015089	-	99	82.301	Propithecus_coquereli
ENSCHIG00000023357	-	57	75.385	ENSRNOG00000047774	AABR07059478.1	93	75.385	Rattus_norvegicus
ENSCHIG00000023357	-	99	81.416	ENSRBIG00000023247	-	99	81.416	Rhinopithecus_bieti
ENSCHIG00000023357	-	99	89.381	ENSRBIG00000029895	-	99	89.381	Rhinopithecus_bieti
ENSCHIG00000023357	-	97	80.000	ENSRBIG00000026756	-	81	88.406	Rhinopithecus_bieti
ENSCHIG00000023357	-	97	79.130	ENSRROG00000031800	-	81	89.855	Rhinopithecus_roxellana
ENSCHIG00000023357	-	99	92.920	ENSRROG00000016846	-	99	92.920	Rhinopithecus_roxellana
ENSCHIG00000023357	-	99	94.690	ENSRROG00000014334	-	99	94.690	Rhinopithecus_roxellana
ENSCHIG00000023357	-	99	94.690	ENSRROG00000004484	-	99	94.690	Rhinopithecus_roxellana
ENSCHIG00000023357	-	99	79.646	ENSRROG00000029835	-	99	79.646	Rhinopithecus_roxellana
ENSCHIG00000023357	-	99	65.812	ENSRROG00000045811	-	99	65.812	Rhinopithecus_roxellana
ENSCHIG00000023357	-	83	89.041	ENSRROG00000043029	-	95	89.041	Rhinopithecus_roxellana
ENSCHIG00000023357	-	100	92.105	ENSSBOG00000023761	-	100	92.105	Saimiri_boliviensis_boliviensis
ENSCHIG00000023357	-	95	95.575	ENSSBOG00000010070	-	50	95.575	Saimiri_boliviensis_boliviensis
ENSCHIG00000023357	-	60	90.566	ENSSSCG00000036498	-	65	90.566	Sus_scrofa
ENSCHIG00000023357	-	97	93.043	ENSSSCG00000009133	-	53	80.800	Sus_scrofa
ENSCHIG00000023357	-	81	64.789	ENSSSCG00000036823	-	81	64.789	Sus_scrofa
ENSCHIG00000023357	-	93	70.270	ENSSSCG00000039349	-	99	71.795	Sus_scrofa
ENSCHIG00000023357	-	82	80.645	ENSSSCG00000005274	-	100	80.645	Sus_scrofa
ENSCHIG00000023357	-	97	70.435	ENSTBEG00000002612	-	55	70.435	Tupaia_belangeri
ENSCHIG00000023357	-	97	97.391	ENSUAMG00000013507	RPS6	93	89.189	Ursus_americanus
ENSCHIG00000023357	-	80	67.949	ENSUAMG00000003587	-	96	68.293	Ursus_americanus
ENSCHIG00000023357	-	73	77.941	ENSUMAG00000001853	-	92	79.710	Ursus_maritimus
ENSCHIG00000023357	-	87	82.692	ENSUMAG00000014126	-	94	82.692	Ursus_maritimus
ENSCHIG00000023357	-	80	77.027	ENSVVUG00000011106	-	89	77.027	Vulpes_vulpes
ENSCHIG00000023357	-	80	85.333	ENSVVUG00000005333	-	91	85.333	Vulpes_vulpes