EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000023385 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1926 bases
Position: chr6:50997431-50999356
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000027523	PABP	PF00658.18	2.4e-21	1	1
ENSCHIP00000027523	RRM_1	PF00076.22	2.7e-55	1	4
ENSCHIP00000027523	RRM_1	PF00076.22	2.7e-55	2	4
ENSCHIP00000027523	RRM_1	PF00076.22	2.7e-55	3	4
ENSCHIP00000027523	RRM_1	PF00076.22	2.7e-55	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000035391	-	1725	-	ENSCHIP00000027523	574 (aa)	-	UPI000D1950E0

Gene Model

Click here to download ENSCHIG00000023385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000023385	-	100	77.121	ENSCHIG00000019398	-	100	77.121
ENSCHIG00000023385	-	98	61.417	ENSCHIG00000023714	PABPC1	97	83.333
ENSCHIG00000023385	-	59	67.857	ENSCHIG00000006283	-	98	67.857
ENSCHIG00000023385	-	95	55.369	ENSCHIG00000025759	PABPC1L	89	55.369
ENSCHIG00000023385	-	61	62.162	ENSCHIG00000007231	PABPC4L	99	62.162
ENSCHIG00000023385	-	59	54.213	ENSCHIG00000019004	PABPC5	95	54.270
ENSCHIG00000023385	-	59	67.857	ENSCHIG00000011138	-	98	67.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023385	-	100	78.416	ENSG00000090621	PABPC4	99	87.387	Homo_sapiens
ENSCHIG00000023385	-	99	64.937	ENSAPOG00000001161	pabpc4	100	65.070	Acanthochromis_polyacanthus
ENSCHIG00000023385	-	100	76.364	ENSAMEG00000011535	-	100	76.364	Ailuropoda_melanoleuca
ENSCHIG00000023385	-	98	46.154	ENSAMEG00000015083	-	99	46.154	Ailuropoda_melanoleuca
ENSCHIG00000023385	-	100	65.533	ENSACIG00000023343	pabpc4	100	65.997	Amphilophus_citrinellus
ENSCHIG00000023385	-	99	65.094	ENSAOCG00000021529	pabpc4	100	65.224	Amphiprion_ocellaris
ENSCHIG00000023385	-	99	65.094	ENSAPEG00000019196	pabpc4	100	65.224	Amphiprion_percula
ENSCHIG00000023385	-	99	64.835	ENSATEG00000007402	pabpc4	100	64.969	Anabas_testudineus
ENSCHIG00000023385	-	99	71.115	ENSAPLG00000009729	-	100	71.115	Anas_platyrhynchos
ENSCHIG00000023385	-	98	69.056	ENSACAG00000002544	PABPC4	100	69.056	Anolis_carolinensis
ENSCHIG00000023385	-	100	76.667	ENSANAG00000025079	PABPC4	100	76.667	Aotus_nancymaae
ENSCHIG00000023385	-	100	64.969	ENSACLG00000019558	pabpc4	100	65.432	Astatotilapia_calliptera
ENSCHIG00000023385	-	99	64.160	ENSAMXG00000018779	pabpc4	99	64.640	Astyanax_mexicanus
ENSCHIG00000023385	-	53	77.844	ENSBTAG00000048536	-	93	77.844	Bos_taurus
ENSCHIG00000023385	-	100	78.605	ENSBTAG00000017125	PABPC4	100	79.070	Bos_taurus
ENSCHIG00000023385	-	100	76.515	ENSCJAG00000002512	-	100	76.515	Callithrix_jacchus
ENSCHIG00000023385	-	63	72.581	ENSCJAG00000045953	-	89	72.581	Callithrix_jacchus
ENSCHIG00000023385	-	100	75.466	ENSCAFG00000003081	PABPC4	100	75.466	Canis_familiaris
ENSCHIG00000023385	-	100	76.515	ENSCAFG00020004161	PABPC4	100	76.515	Canis_lupus_dingo
ENSCHIG00000023385	-	100	76.667	ENSTSYG00000006532	PABPC4	100	76.667	Carlito_syrichta
ENSCHIG00000023385	-	99	76.596	ENSCAPG00000015984	PABPC4	100	76.596	Cavia_aperea
ENSCHIG00000023385	-	100	76.667	ENSCPOG00000009552	PABPC4	100	76.667	Cavia_porcellus
ENSCHIG00000023385	-	100	76.364	ENSCCAG00000037306	PABPC4	100	76.364	Cebus_capucinus
ENSCHIG00000023385	-	100	76.515	ENSCATG00000042164	PABPC4	100	76.515	Cercocebus_atys
ENSCHIG00000023385	-	100	76.364	ENSCLAG00000011899	PABPC4	100	76.364	Chinchilla_lanigera
ENSCHIG00000023385	-	100	76.515	ENSCSAG00000001135	PABPC4	100	76.515	Chlorocebus_sabaeus
ENSCHIG00000023385	-	83	79.019	ENSCHOG00000005327	PABPC4	79	79.019	Choloepus_hoffmanni
ENSCHIG00000023385	-	99	71.272	ENSCPBG00000001038	PABPC4	100	71.272	Chrysemys_picta_bellii
ENSCHIG00000023385	-	98	76.190	ENSCANG00000034177	PABPC4	100	76.190	Colobus_angolensis_palliatus
ENSCHIG00000023385	-	98	75.191	ENSCGRG00001018166	Pabpc4	100	75.452	Cricetulus_griseus_chok1gshd
ENSCHIG00000023385	-	97	76.911	ENSCGRG00000009777	Pabpc4	100	77.152	Cricetulus_griseus_crigri
ENSCHIG00000023385	-	100	64.660	ENSCSEG00000000130	pabpc4	100	65.123	Cynoglossus_semilaevis
ENSCHIG00000023385	-	98	65.149	ENSCVAG00000019246	pabpc4	100	65.620	Cyprinodon_variegatus
ENSCHIG00000023385	-	99	66.823	ENSDARG00000059259	pabpc4	99	67.816	Danio_rerio
ENSCHIG00000023385	-	97	75.862	ENSDNOG00000018444	-	99	75.862	Dasypus_novemcinctus
ENSCHIG00000023385	-	100	78.571	ENSDORG00000011581	Pabpc4	100	78.571	Dipodomys_ordii
ENSCHIG00000023385	-	100	87.302	ENSETEG00000018453	-	84	87.302	Echinops_telfairi
ENSCHIG00000023385	-	85	52.328	ENSETEG00000009172	-	99	52.302	Echinops_telfairi
ENSCHIG00000023385	-	97	60.835	ENSEBUG00000013782	pabpc4	99	60.535	Eptatretus_burgeri
ENSCHIG00000023385	-	99	59.155	ENSEBUG00000000992	pabpc4	100	59.155	Eptatretus_burgeri
ENSCHIG00000023385	-	100	76.667	ENSEASG00005014119	PABPC4	100	76.667	Equus_asinus_asinus
ENSCHIG00000023385	-	100	76.667	ENSECAG00000009396	PABPC4	100	76.667	Equus_caballus
ENSCHIG00000023385	-	98	74.689	ENSEEUG00000002962	PABPC4	100	74.581	Erinaceus_europaeus
ENSCHIG00000023385	-	98	65.197	ENSELUG00000003195	pabpc4	98	65.571	Esox_lucius
ENSCHIG00000023385	-	100	76.667	ENSFCAG00000015254	-	100	76.667	Felis_catus
ENSCHIG00000023385	-	99	70.801	ENSFALG00000000543	PABPC4	100	70.801	Ficedula_albicollis
ENSCHIG00000023385	-	100	76.515	ENSFDAG00000020016	-	100	76.515	Fukomys_damarensis
ENSCHIG00000023385	-	89	52.459	ENSFDAG00000010581	-	99	52.459	Fukomys_damarensis
ENSCHIG00000023385	-	100	65.070	ENSFHEG00000007548	pabpc4	100	65.533	Fundulus_heteroclitus
ENSCHIG00000023385	-	99	64.678	ENSGMOG00000019025	pabpc4	98	65.149	Gadus_morhua
ENSCHIG00000023385	-	99	70.607	ENSGALG00000003800	PABPC4	100	70.607	Gallus_gallus
ENSCHIG00000023385	-	98	70.960	ENSGAFG00000018195	pabpc4	98	85.556	Gambusia_affinis
ENSCHIG00000023385	-	100	63.988	ENSGACG00000007179	pabpc4	100	64.451	Gasterosteus_aculeatus
ENSCHIG00000023385	-	99	70.762	ENSGAGG00000001888	PABPC4	100	70.762	Gopherus_agassizii
ENSCHIG00000023385	-	100	76.515	ENSGGOG00000004002	PABPC4	100	76.515	Gorilla_gorilla
ENSCHIG00000023385	-	100	65.123	ENSHBUG00000020206	pabpc4	100	65.586	Haplochromis_burtoni
ENSCHIG00000023385	-	100	78.571	ENSHGLG00000011162	PABPC4	100	78.571	Heterocephalus_glaber_female
ENSCHIG00000023385	-	100	78.571	ENSHGLG00100001580	PABPC4	100	78.571	Heterocephalus_glaber_male
ENSCHIG00000023385	-	99	65.252	ENSHCOG00000012694	pabpc4	98	65.723	Hippocampus_comes
ENSCHIG00000023385	-	98	65.238	ENSIPUG00000016620	pabpc4	99	64.697	Ictalurus_punctatus
ENSCHIG00000023385	-	100	78.416	ENSSTOG00000010416	PABPC4	100	78.416	Ictidomys_tridecemlineatus
ENSCHIG00000023385	-	100	76.398	ENSJJAG00000007781	Pabpc4	100	76.708	Jaculus_jaculus
ENSCHIG00000023385	-	99	65.109	ENSKMAG00000013597	pabpc4	99	65.576	Kryptolebias_marmoratus
ENSCHIG00000023385	-	100	64.462	ENSLBEG00000013654	pabpc4	100	64.923	Labrus_bergylta
ENSCHIG00000023385	-	99	68.372	ENSLACG00000011907	PABPC4	100	68.372	Latimeria_chalumnae
ENSCHIG00000023385	-	99	66.512	ENSLOCG00000001877	pabpc4	99	67.132	Lepisosteus_oculatus
ENSCHIG00000023385	-	100	76.515	ENSLAFG00000000151	PABPC4	100	76.515	Loxodonta_africana
ENSCHIG00000023385	-	100	76.515	ENSMFAG00000041481	PABPC4	100	76.515	Macaca_fascicularis
ENSCHIG00000023385	-	100	76.515	ENSMMUG00000007497	PABPC4	100	76.515	Macaca_mulatta
ENSCHIG00000023385	-	100	76.364	ENSMNEG00000043054	PABPC4	100	76.364	Macaca_nemestrina
ENSCHIG00000023385	-	100	76.515	ENSMLEG00000040716	PABPC4	100	76.515	Mandrillus_leucophaeus
ENSCHIG00000023385	-	99	65.566	ENSMAMG00000010025	pabpc4	99	65.630	Mastacembelus_armatus
ENSCHIG00000023385	-	100	64.815	ENSMZEG00005006141	pabpc4	100	65.278	Maylandia_zebra
ENSCHIG00000023385	-	98	68.718	ENSMGAG00000005408	PABPC4	99	68.718	Meleagris_gallopavo
ENSCHIG00000023385	-	78	66.667	ENSMAUG00000019763	-	88	66.667	Mesocricetus_auratus
ENSCHIG00000023385	-	55	70.673	ENSMAUG00000001295	-	97	70.673	Mesocricetus_auratus
ENSCHIG00000023385	-	98	64.831	ENSMICG00000036729	-	100	63.884	Microcebus_murinus
ENSCHIG00000023385	-	89	76.174	ENSMICG00000016633	-	100	76.696	Microcebus_murinus
ENSCHIG00000023385	-	99	76.147	ENSMOCG00000006763	Pabpc4	99	75.758	Microtus_ochrogaster
ENSCHIG00000023385	-	100	64.929	ENSMMOG00000002363	pabpc4	99	64.441	Mola_mola
ENSCHIG00000023385	-	58	63.068	ENSMODG00000018051	-	91	63.068	Monodelphis_domestica
ENSCHIG00000023385	-	98	68.944	ENSMODG00000017657	-	100	68.750	Monodelphis_domestica
ENSCHIG00000023385	-	99	65.415	ENSMALG00000011017	pabpc4	100	65.538	Monopterus_albus
ENSCHIG00000023385	-	98	71.936	MGP_CAROLIEiJ_G0024864	-	100	71.936	Mus_caroli
ENSCHIG00000023385	-	100	75.455	MGP_CAROLIEiJ_G0026435	-	100	85.106	Mus_caroli
ENSCHIG00000023385	-	100	77.640	ENSMUSG00000011257	Pabpc4	100	86.310	Mus_musculus
ENSCHIG00000023385	-	98	75.269	MGP_PahariEiJ_G0028765	Pabpc4	100	85.816	Mus_pahari
ENSCHIG00000023385	-	98	62.565	MGP_SPRETEiJ_G0027415	Pabpc4	100	85.106	Mus_spretus
ENSCHIG00000023385	-	98	44.816	ENSMPUG00000006836	-	100	44.816	Mustela_putorius_furo
ENSCHIG00000023385	-	100	76.667	ENSMPUG00000014414	-	100	76.667	Mustela_putorius_furo
ENSCHIG00000023385	-	100	75.705	ENSMLUG00000012068	PABPC4	100	75.705	Myotis_lucifugus
ENSCHIG00000023385	-	100	78.416	ENSNGAG00000018292	Pabpc4	100	78.416	Nannospalax_galili
ENSCHIG00000023385	-	51	77.160	ENSNBRG00000010047	-	69	77.160	Neolamprologus_brichardi
ENSCHIG00000023385	-	59	83.654	ENSNBRG00000009708	pabpc4	98	83.654	Neolamprologus_brichardi
ENSCHIG00000023385	-	100	78.416	ENSNLEG00000011928	PABPC4	100	78.416	Nomascus_leucogenys
ENSCHIG00000023385	-	81	93.478	ENSOPRG00000011984	PABPC4	83	93.478	Ochotona_princeps
ENSCHIG00000023385	-	100	76.783	ENSODEG00000006592	-	100	76.783	Octodon_degus
ENSCHIG00000023385	-	98	69.023	ENSODEG00000017434	-	100	69.023	Octodon_degus
ENSCHIG00000023385	-	100	65.123	ENSONIG00000008176	pabpc4	100	65.586	Oreochromis_niloticus
ENSCHIG00000023385	-	99	69.984	ENSOANG00000010001	PABPC4	100	69.984	Ornithorhynchus_anatinus
ENSCHIG00000023385	-	95	77.083	ENSOCUG00000000562	PABPC4	87	77.083	Oryctolagus_cuniculus
ENSCHIG00000023385	-	99	75.000	ENSORLG00000017479	pabpc4	99	74.769	Oryzias_latipes
ENSCHIG00000023385	-	99	75.000	ENSORLG00020018644	pabpc4	99	74.769	Oryzias_latipes_hni
ENSCHIG00000023385	-	99	75.000	ENSORLG00015015042	pabpc4	99	74.769	Oryzias_latipes_hsok
ENSCHIG00000023385	-	99	65.463	ENSOMEG00000014410	pabpc4	99	65.683	Oryzias_melastigma
ENSCHIG00000023385	-	100	77.350	ENSOGAG00000004067	PABPC4	100	78.053	Otolemur_garnettii
ENSCHIG00000023385	-	100	77.121	ENSOARG00000020060	PABPC4	100	77.121	Ovis_aries
ENSCHIG00000023385	-	100	76.515	ENSPPAG00000043625	PABPC4	100	76.515	Pan_paniscus
ENSCHIG00000023385	-	100	76.667	ENSPPRG00000024727	PABPC4	100	76.667	Panthera_pardus
ENSCHIG00000023385	-	100	76.667	ENSPTIG00000005829	PABPC4	100	76.667	Panthera_tigris_altaica
ENSCHIG00000023385	-	100	76.515	ENSPTRG00000000573	PABPC4	100	76.515	Pan_troglodytes
ENSCHIG00000023385	-	100	76.667	ENSPANG00000009484	PABPC4	100	76.667	Papio_anubis
ENSCHIG00000023385	-	99	66.562	ENSPKIG00000025356	pabpc4	99	67.031	Paramormyrops_kingsleyae
ENSCHIG00000023385	-	99	70.607	ENSPSIG00000016892	PABPC4	100	70.607	Pelodiscus_sinensis
ENSCHIG00000023385	-	100	65.293	ENSPMGG00000009073	pabpc4	99	65.293	Periophthalmus_magnuspinnatus
ENSCHIG00000023385	-	100	75.303	ENSPEMG00000023569	-	99	75.303	Peromyscus_maniculatus_bairdii
ENSCHIG00000023385	-	100	74.375	ENSPEMG00000024193	-	99	74.375	Peromyscus_maniculatus_bairdii
ENSCHIG00000023385	-	89	57.751	ENSPMAG00000002836	pabpc4	100	58.291	Petromyzon_marinus
ENSCHIG00000023385	-	95	52.610	ENSPMAG00000007885	pabpc4	99	52.642	Petromyzon_marinus
ENSCHIG00000023385	-	98	70.048	ENSPCIG00000020674	PABPC4	100	69.829	Phascolarctos_cinereus
ENSCHIG00000023385	-	100	64.297	ENSPFOG00000002682	pabpc4	100	65.224	Poecilia_formosa
ENSCHIG00000023385	-	100	64.297	ENSPLAG00000010112	pabpc4	100	65.224	Poecilia_latipinna
ENSCHIG00000023385	-	99	64.521	ENSPMEG00000019739	pabpc4	100	65.224	Poecilia_mexicana
ENSCHIG00000023385	-	100	64.760	ENSPREG00000001589	pabpc4	100	65.224	Poecilia_reticulata
ENSCHIG00000023385	-	100	76.515	ENSPPYG00000001506	PABPC4	100	76.515	Pongo_abelii
ENSCHIG00000023385	-	100	72.424	ENSPCAG00000003341	PABPC4	100	72.424	Procavia_capensis
ENSCHIG00000023385	-	100	76.097	ENSPCOG00000023725	-	100	76.551	Propithecus_coquereli
ENSCHIG00000023385	-	82	71.287	ENSPCOG00000025882	-	94	71.287	Propithecus_coquereli
ENSCHIG00000023385	-	89	76.223	ENSPVAG00000002187	PABPC4	99	76.223	Pteropus_vampyrus
ENSCHIG00000023385	-	100	64.969	ENSPNYG00000006134	pabpc4	100	65.432	Pundamilia_nyererei
ENSCHIG00000023385	-	100	65.325	ENSPNAG00000024355	pabpc4	100	65.789	Pygocentrus_nattereri
ENSCHIG00000023385	-	100	77.640	ENSRNOG00000015642	Pabpc4	100	77.640	Rattus_norvegicus
ENSCHIG00000023385	-	100	76.087	ENSRNOG00000028592	AABR07035074.1	100	76.087	Rattus_norvegicus
ENSCHIG00000023385	-	100	76.515	ENSRBIG00000039761	PABPC4	100	76.515	Rhinopithecus_bieti
ENSCHIG00000023385	-	100	76.515	ENSRROG00000033355	PABPC4	100	76.515	Rhinopithecus_roxellana
ENSCHIG00000023385	-	100	76.515	ENSSBOG00000026193	PABPC4	100	76.515	Saimiri_boliviensis_boliviensis
ENSCHIG00000023385	-	98	69.889	ENSSHAG00000018139	PABPC4	100	69.673	Sarcophilus_harrisii
ENSCHIG00000023385	-	98	66.775	ENSSFOG00015023514	pabpc4	99	66.775	Scleropages_formosus
ENSCHIG00000023385	-	99	64.688	ENSSMAG00000009007	pabpc4	99	65.156	Scophthalmus_maximus
ENSCHIG00000023385	-	99	64.780	ENSSDUG00000012683	pabpc4	100	64.915	Seriola_dumerili
ENSCHIG00000023385	-	99	64.780	ENSSLDG00000013025	pabpc4	100	64.915	Seriola_lalandi_dorsalis
ENSCHIG00000023385	-	100	71.298	ENSSARG00000000310	PABPC4	100	71.298	Sorex_araneus
ENSCHIG00000023385	-	99	71.272	ENSSPUG00000003204	PABPC4	100	71.272	Sphenodon_punctatus
ENSCHIG00000023385	-	99	65.409	ENSSPAG00000009252	pabpc4	100	65.533	Stegastes_partitus
ENSCHIG00000023385	-	89	45.725	ENSSSCG00000036170	-	96	46.283	Sus_scrofa
ENSCHIG00000023385	-	100	76.818	ENSSSCG00000003660	-	100	76.818	Sus_scrofa
ENSCHIG00000023385	-	99	68.778	ENSTGUG00000001266	PABPC4	100	68.778	Taeniopygia_guttata
ENSCHIG00000023385	-	100	65.319	ENSTRUG00000005907	pabpc4	99	65.785	Takifugu_rubripes
ENSCHIG00000023385	-	100	64.623	ENSTNIG00000016902	pabpc4	99	64.623	Tetraodon_nigroviridis
ENSCHIG00000023385	-	89	70.101	ENSTBEG00000009035	PABPC4	99	70.101	Tupaia_belangeri
ENSCHIG00000023385	-	89	67.960	ENSTTRG00000014340	PABPC4	99	67.960	Tursiops_truncatus
ENSCHIG00000023385	-	100	76.364	ENSUAMG00000000303	PABPC4	100	76.364	Ursus_americanus
ENSCHIG00000023385	-	100	78.000	ENSUMAG00000019585	PABPC4	97	82.039	Ursus_maritimus
ENSCHIG00000023385	-	84	87.302	ENSVPAG00000010041	PABPC4	64	87.302	Vicugna_pacos
ENSCHIG00000023385	-	100	76.515	ENSVVUG00000005215	PABPC4	100	76.515	Vulpes_vulpes
ENSCHIG00000023385	-	99	64.521	ENSXETG00000010946	pabpc4	100	64.678	Xenopus_tropicalis
ENSCHIG00000023385	-	54	84.524	ENSXETG00000027221	-	100	84.524	Xenopus_tropicalis
ENSCHIG00000023385	-	98	66.114	ENSXCOG00000013190	pabpc4	96	73.113	Xiphophorus_couchianus
ENSCHIG00000023385	-	100	64.760	ENSXMAG00000019007	pabpc4	100	65.224	Xiphophorus_maculatus