EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000023497 (Gene tree)
Gene ID: 102171898
Gene Symbol: CLP1
Alias: HEAB|hClp1
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1836 bases
Position: chr15:2382305-2384140
Accession: 102171898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000027671	Clp1	PF06807.14	3.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000035539	CLP1-201	1278	XM_018059047	ENSCHIP00000027671	425 (aa)	XP_017914536	UPI0003AF9ECC

Gene Model

Click here to download ENSCHIG00000023497's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023497	CLP1	100	98.824	ENSG00000172409	CLP1	100	98.824	Homo_sapiens
ENSCHIG00000023497	CLP1	98	76.651	ENSAPOG00000008242	clp1	96	76.651	Acanthochromis_polyacanthus
ENSCHIG00000023497	CLP1	100	99.294	ENSAMEG00000014551	CLP1	98	99.294	Ailuropoda_melanoleuca
ENSCHIG00000023497	CLP1	99	74.943	ENSACIG00000006310	clp1	98	74.943	Amphilophus_citrinellus
ENSCHIG00000023497	CLP1	99	75.402	ENSAOCG00000010681	clp1	98	76.960	Amphiprion_ocellaris
ENSCHIG00000023497	CLP1	98	76.651	ENSAPEG00000012165	clp1	99	76.651	Amphiprion_percula
ENSCHIG00000023497	CLP1	99	76.102	ENSATEG00000012374	clp1	98	76.102	Anabas_testudineus
ENSCHIG00000023497	CLP1	100	93.412	ENSACAG00000007139	CLP1	100	93.412	Anolis_carolinensis
ENSCHIG00000023497	CLP1	100	98.824	ENSANAG00000034935	CLP1	100	98.824	Aotus_nancymaae
ENSCHIG00000023497	CLP1	99	75.406	ENSACLG00000013573	clp1	98	75.406	Astatotilapia_calliptera
ENSCHIG00000023497	CLP1	97	78.860	ENSAMXG00000014194	clp1	98	78.860	Astyanax_mexicanus
ENSCHIG00000023497	CLP1	100	99.294	ENSBTAG00000006493	CLP1	100	99.294	Bos_taurus
ENSCHIG00000023497	CLP1	96	47.962	WBGene00010304	clpf-1	97	47.962	Caenorhabditis_elegans
ENSCHIG00000023497	CLP1	100	98.824	ENSCJAG00000008748	CLP1	100	98.824	Callithrix_jacchus
ENSCHIG00000023497	CLP1	100	99.294	ENSCAFG00000007815	CLP1	100	99.294	Canis_familiaris
ENSCHIG00000023497	CLP1	100	99.294	ENSCAFG00020000903	CLP1	100	99.294	Canis_lupus_dingo
ENSCHIG00000023497	CLP1	100	99.059	ENSTSYG00000006824	CLP1	99	99.059	Carlito_syrichta
ENSCHIG00000023497	CLP1	100	98.588	ENSCAPG00000009703	CLP1	100	98.588	Cavia_aperea
ENSCHIG00000023497	CLP1	98	99.038	ENSCPOG00000012554	CLP1	99	99.038	Cavia_porcellus
ENSCHIG00000023497	CLP1	100	98.353	ENSCCAG00000031957	CLP1	100	98.353	Cebus_capucinus
ENSCHIG00000023497	CLP1	100	98.824	ENSCATG00000044628	CLP1	100	98.824	Cercocebus_atys
ENSCHIG00000023497	CLP1	100	99.059	ENSCLAG00000004094	CLP1	100	99.059	Chinchilla_lanigera
ENSCHIG00000023497	CLP1	100	98.824	ENSCSAG00000005994	CLP1	100	98.824	Chlorocebus_sabaeus
ENSCHIG00000023497	CLP1	100	94.118	ENSCPBG00000016843	CLP1	100	94.118	Chrysemys_picta_bellii
ENSCHIG00000023497	CLP1	99	62.884	ENSCING00000003779	-	98	62.884	Ciona_intestinalis
ENSCHIG00000023497	CLP1	99	62.796	ENSCSAVG00000003437	-	99	62.796	Ciona_savignyi
ENSCHIG00000023497	CLP1	100	98.824	ENSCANG00000034335	CLP1	100	98.824	Colobus_angolensis_palliatus
ENSCHIG00000023497	CLP1	100	98.588	ENSCGRG00001002227	CLP1	100	98.588	Cricetulus_griseus_chok1gshd
ENSCHIG00000023497	CLP1	100	98.588	ENSCGRG00000004328	CLP1	100	98.588	Cricetulus_griseus_crigri
ENSCHIG00000023497	CLP1	99	74.478	ENSCSEG00000008614	clp1	98	74.478	Cynoglossus_semilaevis
ENSCHIG00000023497	CLP1	99	76.102	ENSCVAG00000020101	clp1	98	76.102	Cyprinodon_variegatus
ENSCHIG00000023497	CLP1	97	79.714	ENSDARG00000063663	clp1	95	79.714	Danio_rerio
ENSCHIG00000023497	CLP1	99	98.821	ENSDNOG00000042415	CLP1	90	98.821	Dasypus_novemcinctus
ENSCHIG00000023497	CLP1	100	98.824	ENSDORG00000014685	Clp1	100	98.824	Dipodomys_ordii
ENSCHIG00000023497	CLP1	96	56.796	FBgn0033842	cbc	97	56.796	Drosophila_melanogaster
ENSCHIG00000023497	CLP1	100	99.059	ENSETEG00000003009	CLP1	100	99.059	Echinops_telfairi
ENSCHIG00000023497	CLP1	97	72.155	ENSEBUG00000011648	clp1	97	72.155	Eptatretus_burgeri
ENSCHIG00000023497	CLP1	100	99.059	ENSEASG00005002093	CLP1	100	99.059	Equus_asinus_asinus
ENSCHIG00000023497	CLP1	100	99.059	ENSECAG00000011597	CLP1	100	99.059	Equus_caballus
ENSCHIG00000023497	CLP1	100	97.882	ENSEEUG00000012771	CLP1	100	97.882	Erinaceus_europaeus
ENSCHIG00000023497	CLP1	97	79.335	ENSELUG00000024048	clp1	95	79.335	Esox_lucius
ENSCHIG00000023497	CLP1	100	99.529	ENSFCAG00000006633	CLP1	100	99.529	Felis_catus
ENSCHIG00000023497	CLP1	100	92.000	ENSFALG00000011145	CLP1	100	92.000	Ficedula_albicollis
ENSCHIG00000023497	CLP1	100	99.059	ENSFDAG00000000234	CLP1	100	99.059	Fukomys_damarensis
ENSCHIG00000023497	CLP1	99	75.638	ENSFHEG00000014760	CLP1	98	75.638	Fundulus_heteroclitus
ENSCHIG00000023497	CLP1	99	78.089	ENSGMOG00000019340	clp1	98	78.089	Gadus_morhua
ENSCHIG00000023497	CLP1	100	92.706	ENSGALG00000007370	CLP1	100	92.706	Gallus_gallus
ENSCHIG00000023497	CLP1	99	76.102	ENSGAFG00000003020	clp1	99	76.102	Gambusia_affinis
ENSCHIG00000023497	CLP1	99	76.566	ENSGACG00000017832	clp1	98	76.566	Gasterosteus_aculeatus
ENSCHIG00000023497	CLP1	100	93.882	ENSGAGG00000013279	CLP1	100	93.882	Gopherus_agassizii
ENSCHIG00000023497	CLP1	100	98.824	ENSGGOG00000023006	CLP1	100	98.824	Gorilla_gorilla
ENSCHIG00000023497	CLP1	99	75.406	ENSHBUG00000010436	clp1	98	75.406	Haplochromis_burtoni
ENSCHIG00000023497	CLP1	100	99.059	ENSHGLG00000009914	CLP1	100	99.059	Heterocephalus_glaber_female
ENSCHIG00000023497	CLP1	100	99.059	ENSHGLG00100006105	CLP1	100	99.059	Heterocephalus_glaber_male
ENSCHIG00000023497	CLP1	99	76.782	ENSHCOG00000010072	clp1	99	76.782	Hippocampus_comes
ENSCHIG00000023497	CLP1	97	79.524	ENSIPUG00000016238	clp1	94	79.335	Ictalurus_punctatus
ENSCHIG00000023497	CLP1	100	99.059	ENSSTOG00000029257	CLP1	100	99.059	Ictidomys_tridecemlineatus
ENSCHIG00000023497	CLP1	100	98.588	ENSJJAG00000023691	Clp1	100	98.588	Jaculus_jaculus
ENSCHIG00000023497	CLP1	99	75.406	ENSKMAG00000011990	clp1	98	75.406	Kryptolebias_marmoratus
ENSCHIG00000023497	CLP1	99	76.566	ENSLBEG00000010201	clp1	98	76.566	Labrus_bergylta
ENSCHIG00000023497	CLP1	100	85.176	ENSLACG00000003160	CLP1	100	85.176	Latimeria_chalumnae
ENSCHIG00000023497	CLP1	73	77.019	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSCHIG00000023497	CLP1	100	98.824	ENSLAFG00000014907	CLP1	100	98.824	Loxodonta_africana
ENSCHIG00000023497	CLP1	100	98.824	ENSMFAG00000046074	CLP1	100	98.824	Macaca_fascicularis
ENSCHIG00000023497	CLP1	100	98.824	ENSMMUG00000038007	CLP1	99	98.824	Macaca_mulatta
ENSCHIG00000023497	CLP1	100	98.824	ENSMNEG00000000259	CLP1	100	98.824	Macaca_nemestrina
ENSCHIG00000023497	CLP1	100	98.824	ENSMLEG00000043556	CLP1	100	98.824	Mandrillus_leucophaeus
ENSCHIG00000023497	CLP1	100	75.751	ENSMAMG00000002149	clp1	98	75.751	Mastacembelus_armatus
ENSCHIG00000023497	CLP1	99	75.406	ENSMZEG00005002850	clp1	98	75.406	Maylandia_zebra
ENSCHIG00000023497	CLP1	100	92.706	ENSMGAG00000009643	CLP1	100	92.706	Meleagris_gallopavo
ENSCHIG00000023497	CLP1	100	97.882	ENSMAUG00000016261	Clp1	100	97.882	Mesocricetus_auratus
ENSCHIG00000023497	CLP1	100	99.294	ENSMICG00000004895	CLP1	100	99.294	Microcebus_murinus
ENSCHIG00000023497	CLP1	100	98.824	ENSMOCG00000005498	Clp1	100	98.824	Microtus_ochrogaster
ENSCHIG00000023497	CLP1	98	77.830	ENSMMOG00000003229	clp1	96	77.830	Mola_mola
ENSCHIG00000023497	CLP1	100	97.176	ENSMODG00000024148	-	100	97.176	Monodelphis_domestica
ENSCHIG00000023497	CLP1	100	97.176	ENSMODG00000020107	-	100	97.176	Monodelphis_domestica
ENSCHIG00000023497	CLP1	99	75.632	ENSMALG00000014239	clp1	99	75.632	Monopterus_albus
ENSCHIG00000023497	CLP1	100	98.353	MGP_CAROLIEiJ_G0023726	Clp1	100	98.353	Mus_caroli
ENSCHIG00000023497	CLP1	100	98.353	ENSMUSG00000027079	Clp1	100	98.353	Mus_musculus
ENSCHIG00000023497	CLP1	100	98.118	MGP_PahariEiJ_G0025177	Clp1	100	98.118	Mus_pahari
ENSCHIG00000023497	CLP1	100	98.353	MGP_SPRETEiJ_G0024646	Clp1	100	98.353	Mus_spretus
ENSCHIG00000023497	CLP1	100	99.294	ENSMPUG00000000268	CLP1	100	99.294	Mustela_putorius_furo
ENSCHIG00000023497	CLP1	100	98.353	ENSMLUG00000007904	CLP1	100	98.353	Myotis_lucifugus
ENSCHIG00000023497	CLP1	100	99.059	ENSNGAG00000006165	Clp1	100	99.059	Nannospalax_galili
ENSCHIG00000023497	CLP1	99	75.406	ENSNBRG00000005225	clp1	98	75.406	Neolamprologus_brichardi
ENSCHIG00000023497	CLP1	82	94.949	ENSNLEG00000012809	-	100	94.949	Nomascus_leucogenys
ENSCHIG00000023497	CLP1	100	97.176	ENSMEUG00000010949	CLP1	99	97.176	Notamacropus_eugenii
ENSCHIG00000023497	CLP1	70	98.658	ENSOPRG00000007329	CLP1	100	98.658	Ochotona_princeps
ENSCHIG00000023497	CLP1	100	99.059	ENSODEG00000011410	CLP1	100	99.059	Octodon_degus
ENSCHIG00000023497	CLP1	99	75.174	ENSONIG00000005089	clp1	98	75.174	Oreochromis_niloticus
ENSCHIG00000023497	CLP1	100	98.824	ENSOCUG00000007045	CLP1	100	98.824	Oryctolagus_cuniculus
ENSCHIG00000023497	CLP1	99	74.943	ENSORLG00000003647	clp1	99	74.943	Oryzias_latipes
ENSCHIG00000023497	CLP1	99	74.713	ENSORLG00020016676	clp1	99	74.713	Oryzias_latipes_hni
ENSCHIG00000023497	CLP1	99	74.943	ENSORLG00015019484	clp1	99	74.943	Oryzias_latipes_hsok
ENSCHIG00000023497	CLP1	99	75.406	ENSOMEG00000021303	clp1	98	75.406	Oryzias_melastigma
ENSCHIG00000023497	CLP1	100	99.529	ENSOGAG00000004508	CLP1	100	99.529	Otolemur_garnettii
ENSCHIG00000023497	CLP1	100	98.588	ENSOARG00000010145	CLP1	98	98.588	Ovis_aries
ENSCHIG00000023497	CLP1	100	98.824	ENSPPAG00000041519	CLP1	100	98.824	Pan_paniscus
ENSCHIG00000023497	CLP1	100	99.529	ENSPPRG00000006135	CLP1	100	99.529	Panthera_pardus
ENSCHIG00000023497	CLP1	100	99.529	ENSPTIG00000015866	CLP1	100	99.529	Panthera_tigris_altaica
ENSCHIG00000023497	CLP1	100	98.824	ENSPTRG00000047318	CLP1	100	98.824	Pan_troglodytes
ENSCHIG00000023497	CLP1	100	98.824	ENSPANG00000017078	CLP1	97	98.824	Papio_anubis
ENSCHIG00000023497	CLP1	97	80.387	ENSPKIG00000007697	clp1	94	80.387	Paramormyrops_kingsleyae
ENSCHIG00000023497	CLP1	95	91.542	ENSPSIG00000005468	CLP1	100	91.542	Pelodiscus_sinensis
ENSCHIG00000023497	CLP1	99	76.744	ENSPMGG00000012171	clp1	98	76.744	Periophthalmus_magnuspinnatus
ENSCHIG00000023497	CLP1	100	98.824	ENSPEMG00000011213	-	100	98.824	Peromyscus_maniculatus_bairdii
ENSCHIG00000023497	CLP1	100	75.587	ENSPMAG00000006707	clp1	100	75.587	Petromyzon_marinus
ENSCHIG00000023497	CLP1	100	97.176	ENSPCIG00000011899	CLP1	99	97.176	Phascolarctos_cinereus
ENSCHIG00000023497	CLP1	99	75.638	ENSPFOG00000008169	clp1	98	75.638	Poecilia_formosa
ENSCHIG00000023497	CLP1	99	75.638	ENSPLAG00000022388	clp1	99	75.638	Poecilia_latipinna
ENSCHIG00000023497	CLP1	99	75.638	ENSPMEG00000021088	clp1	99	75.638	Poecilia_mexicana
ENSCHIG00000023497	CLP1	99	75.870	ENSPREG00000017802	clp1	98	75.870	Poecilia_reticulata
ENSCHIG00000023497	CLP1	53	98.661	ENSPPYG00000003266	-	100	98.661	Pongo_abelii
ENSCHIG00000023497	CLP1	100	99.294	ENSPCOG00000000360	CLP1	98	99.294	Propithecus_coquereli
ENSCHIG00000023497	CLP1	100	99.294	ENSPVAG00000016270	CLP1	100	99.294	Pteropus_vampyrus
ENSCHIG00000023497	CLP1	99	75.406	ENSPNYG00000017274	clp1	97	75.406	Pundamilia_nyererei
ENSCHIG00000023497	CLP1	97	80.238	ENSPNAG00000026460	clp1	95	80.285	Pygocentrus_nattereri
ENSCHIG00000023497	CLP1	100	98.353	ENSRNOG00000007416	Clp1	100	98.353	Rattus_norvegicus
ENSCHIG00000023497	CLP1	100	98.824	ENSRBIG00000018191	CLP1	100	98.824	Rhinopithecus_bieti
ENSCHIG00000023497	CLP1	100	98.824	ENSRROG00000039265	CLP1	100	98.824	Rhinopithecus_roxellana
ENSCHIG00000023497	CLP1	96	79.310	ENSSBOG00000010558	-	93	79.310	Saimiri_boliviensis_boliviensis
ENSCHIG00000023497	CLP1	100	98.824	ENSSBOG00000032517	-	100	98.824	Saimiri_boliviensis_boliviensis
ENSCHIG00000023497	CLP1	100	97.412	ENSSHAG00000015695	CLP1	100	97.412	Sarcophilus_harrisii
ENSCHIG00000023497	CLP1	97	79.294	ENSSFOG00015000628	clp1	96	79.294	Scleropages_formosus
ENSCHIG00000023497	CLP1	99	75.174	ENSSMAG00000019423	clp1	97	75.174	Scophthalmus_maximus
ENSCHIG00000023497	CLP1	99	76.092	ENSSDUG00000014495	clp1	99	76.092	Seriola_dumerili
ENSCHIG00000023497	CLP1	99	75.862	ENSSLDG00000000937	clp1	99	75.862	Seriola_lalandi_dorsalis
ENSCHIG00000023497	CLP1	52	98.206	ENSSARG00000002459	CLP1	100	98.206	Sorex_araneus
ENSCHIG00000023497	CLP1	100	93.176	ENSSPUG00000016811	CLP1	100	93.176	Sphenodon_punctatus
ENSCHIG00000023497	CLP1	99	74.943	ENSSPAG00000016052	clp1	99	74.943	Stegastes_partitus
ENSCHIG00000023497	CLP1	100	99.294	ENSSSCG00000031442	CLP1	100	99.294	Sus_scrofa
ENSCHIG00000023497	CLP1	100	91.765	ENSTGUG00000007002	CLP1	100	91.765	Taeniopygia_guttata
ENSCHIG00000023497	CLP1	99	76.347	ENSTRUG00000012602	clp1	98	76.347	Takifugu_rubripes
ENSCHIG00000023497	CLP1	99	75.878	ENSTNIG00000013125	clp1	98	75.878	Tetraodon_nigroviridis
ENSCHIG00000023497	CLP1	100	98.118	ENSTBEG00000009975	CLP1	100	98.118	Tupaia_belangeri
ENSCHIG00000023497	CLP1	100	98.824	ENSTTRG00000002096	CLP1	100	98.824	Tursiops_truncatus
ENSCHIG00000023497	CLP1	100	99.294	ENSUAMG00000011388	CLP1	100	99.294	Ursus_americanus
ENSCHIG00000023497	CLP1	100	99.294	ENSUMAG00000018317	CLP1	100	99.294	Ursus_maritimus
ENSCHIG00000023497	CLP1	100	99.294	ENSVVUG00000017138	CLP1	97	99.294	Vulpes_vulpes
ENSCHIG00000023497	CLP1	98	77.698	ENSXETG00000007088	clp1	95	78.657	Xenopus_tropicalis
ENSCHIG00000023497	CLP1	99	75.870	ENSXCOG00000002287	clp1	98	75.870	Xiphophorus_couchianus
ENSCHIG00000023497	CLP1	99	75.870	ENSXMAG00000009783	clp1	98	75.870	Xiphophorus_maculatus