EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000023511 (Gene tree)
Gene ID: 102175049
Gene Symbol: SWT1
Alias: C1orf26|FLJ20121|HsSwt1
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 97058 bases
Position: chr16:64786728-64883785
Accession: 102175049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000027757	PIN_4	PF13638.6	4.9e-28	1	1
ENSCHIP00000027764	PIN_4	PF13638.6	5.8e-28	1	1
ENSCHIP00000027717	PIN_4	PF13638.6	5.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000035625	SWT1-202	2577	XM_018060724	ENSCHIP00000027757	858 (aa)	XP_017916213	UPI000D1972F3
ENSCHIT00000035585	SWT1-201	1479	-	ENSCHIP00000027717	492 (aa)	-	UPI000D19039C
ENSCHIT00000035632	SWT1-203	1758	XM_005690975	ENSCHIP00000027764	585 (aa)	XP_005691032	UPI000D1938C0

Gene Model

Click here to download ENSCHIG00000023511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023511	SWT1	99	85.983	ENSG00000116668	SWT1	91	80.242	Homo_sapiens
ENSCHIG00000023511	SWT1	93	33.276	ENSAPOG00000014897	-	58	33.622	Acanthochromis_polyacanthus
ENSCHIG00000023511	SWT1	100	86.294	ENSAMEG00000013585	SWT1	91	82.082	Ailuropoda_melanoleuca
ENSCHIG00000023511	SWT1	93	33.390	ENSAOCG00000013932	swt1	58	33.910	Amphiprion_ocellaris
ENSCHIG00000023511	SWT1	93	33.390	ENSAPEG00000009613	-	58	33.737	Amphiprion_percula
ENSCHIG00000023511	SWT1	93	34.247	ENSATEG00000018946	swt1	60	33.997	Anabas_testudineus
ENSCHIG00000023511	SWT1	98	54.545	ENSAPLG00000008607	SWT1	100	47.767	Anas_platyrhynchos
ENSCHIG00000023511	SWT1	98	46.037	ENSACAG00000002276	SWT1	67	46.848	Anolis_carolinensis
ENSCHIG00000023511	SWT1	99	85.299	ENSANAG00000027068	SWT1	91	79.879	Aotus_nancymaae
ENSCHIG00000023511	SWT1	92	32.014	ENSACLG00000009742	swt1	68	32.522	Astatotilapia_calliptera
ENSCHIG00000023511	SWT1	96	39.826	ENSAMXG00000010971	swt1	60	39.761	Astyanax_mexicanus
ENSCHIG00000023511	SWT1	100	94.919	ENSBTAG00000004492	SWT1	100	95.078	Bos_taurus
ENSCHIG00000023511	SWT1	100	84.130	ENSCJAG00000005544	SWT1	91	78.623	Callithrix_jacchus
ENSCHIG00000023511	SWT1	100	87.648	ENSCAFG00000013543	SWT1	90	81.481	Canis_familiaris
ENSCHIG00000023511	SWT1	100	87.648	ENSCAFG00020015648	SWT1	96	81.697	Canis_lupus_dingo
ENSCHIG00000023511	SWT1	100	84.941	ENSTSYG00000010470	SWT1	93	78.749	Carlito_syrichta
ENSCHIG00000023511	SWT1	89	83.365	ENSCPOG00000014251	SWT1	94	78.628	Cavia_porcellus
ENSCHIG00000023511	SWT1	99	85.812	ENSCCAG00000033926	SWT1	94	78.588	Cebus_capucinus
ENSCHIG00000023511	SWT1	99	87.009	ENSCATG00000042210	SWT1	99	86.838	Cercocebus_atys
ENSCHIG00000023511	SWT1	98	84.220	ENSCLAG00000013959	SWT1	93	77.153	Chinchilla_lanigera
ENSCHIG00000023511	SWT1	99	86.667	ENSCSAG00000012895	SWT1	93	78.538	Chlorocebus_sabaeus
ENSCHIG00000023511	SWT1	98	57.191	ENSCPBG00000015691	SWT1	90	47.810	Chrysemys_picta_bellii
ENSCHIG00000023511	SWT1	99	85.641	ENSCANG00000032207	SWT1	99	85.666	Colobus_angolensis_palliatus
ENSCHIG00000023511	SWT1	100	80.372	ENSCGRG00001022955	Swt1	92	72.922	Cricetulus_griseus_chok1gshd
ENSCHIG00000023511	SWT1	100	80.372	ENSCGRG00000010224	Swt1	94	72.922	Cricetulus_griseus_crigri
ENSCHIG00000023511	SWT1	95	33.499	ENSCSEG00000017352	swt1	75	34.506	Cynoglossus_semilaevis
ENSCHIG00000023511	SWT1	97	38.527	ENSDARG00000094010	swt1	58	38.527	Danio_rerio
ENSCHIG00000023511	SWT1	85	82.341	ENSDNOG00000005254	SWT1	93	72.715	Dasypus_novemcinctus
ENSCHIG00000023511	SWT1	99	83.249	ENSDORG00000010531	Swt1	94	79.276	Dipodomys_ordii
ENSCHIG00000023511	SWT1	100	80.880	ENSEASG00005005530	SWT1	98	77.536	Equus_asinus_asinus
ENSCHIG00000023511	SWT1	100	83.756	ENSECAG00000012085	SWT1	98	79.589	Equus_caballus
ENSCHIG00000023511	SWT1	82	83.908	ENSEEUG00000003664	SWT1	81	83.908	Erinaceus_europaeus
ENSCHIG00000023511	SWT1	95	36.471	ENSELUG00000020565	swt1	58	36.895	Esox_lucius
ENSCHIG00000023511	SWT1	100	85.787	ENSFCAG00000011286	SWT1	91	81.719	Felis_catus
ENSCHIG00000023511	SWT1	98	51.707	ENSFALG00000003206	SWT1	95	43.021	Ficedula_albicollis
ENSCHIG00000023511	SWT1	100	81.757	ENSFDAG00000007569	SWT1	92	76.942	Fukomys_damarensis
ENSCHIG00000023511	SWT1	96	53.403	ENSGALG00000034230	SWT1	65	54.321	Gallus_gallus
ENSCHIG00000023511	SWT1	92	32.770	ENSGAFG00000007803	-	58	32.818	Gambusia_affinis
ENSCHIG00000023511	SWT1	98	56.239	ENSGAGG00000025050	SWT1	99	57.340	Gopherus_agassizii
ENSCHIG00000023511	SWT1	90	86.260	ENSGGOG00000041167	-	95	86.260	Gorilla_gorilla
ENSCHIG00000023511	SWT1	95	32.280	ENSHBUG00000006188	swt1	68	32.773	Haplochromis_burtoni
ENSCHIG00000023511	SWT1	98	84.192	ENSHGLG00000006542	SWT1	95	78.388	Heterocephalus_glaber_female
ENSCHIG00000023511	SWT1	98	84.021	ENSHGLG00100014408	SWT1	92	78.388	Heterocephalus_glaber_male
ENSCHIG00000023511	SWT1	96	36.177	ENSIPUG00000009113	-	58	36.878	Ictalurus_punctatus
ENSCHIG00000023511	SWT1	100	83.587	ENSSTOG00000010356	SWT1	92	77.925	Ictidomys_tridecemlineatus
ENSCHIG00000023511	SWT1	99	76.923	ENSJJAG00000015927	Swt1	94	72.783	Jaculus_jaculus
ENSCHIG00000023511	SWT1	95	32.660	ENSKMAG00000012533	swt1	59	32.993	Kryptolebias_marmoratus
ENSCHIG00000023511	SWT1	92	35.121	ENSLBEG00000020663	-	57	35.664	Labrus_bergylta
ENSCHIG00000023511	SWT1	98	50.334	ENSLACG00000009194	SWT1	99	46.968	Latimeria_chalumnae
ENSCHIG00000023511	SWT1	93	41.533	ENSLOCG00000001749	swt1	99	41.912	Lepisosteus_oculatus
ENSCHIG00000023511	SWT1	100	85.448	ENSLAFG00000004346	-	100	86.224	Loxodonta_africana
ENSCHIG00000023511	SWT1	99	86.325	ENSMFAG00000031793	SWT1	99	86.278	Macaca_fascicularis
ENSCHIG00000023511	SWT1	99	82.852	ENSMMUG00000013882	SWT1	99	82.676	Macaca_mulatta
ENSCHIG00000023511	SWT1	99	86.154	ENSMNEG00000035502	SWT1	99	86.106	Macaca_nemestrina
ENSCHIG00000023511	SWT1	99	87.009	ENSMLEG00000038692	SWT1	99	87.009	Mandrillus_leucophaeus
ENSCHIG00000023511	SWT1	95	32.446	ENSMZEG00005018489	swt1	68	32.941	Maylandia_zebra
ENSCHIG00000023511	SWT1	98	51.419	ENSMGAG00000000973	SWT1	100	51.765	Meleagris_gallopavo
ENSCHIG00000023511	SWT1	100	71.743	ENSMAUG00000007996	Swt1	93	65.541	Mesocricetus_auratus
ENSCHIG00000023511	SWT1	100	85.279	ENSMICG00000014975	SWT1	93	80.756	Microcebus_murinus
ENSCHIG00000023511	SWT1	100	79.865	ENSMOCG00000009776	Swt1	90	73.908	Microtus_ochrogaster
ENSCHIG00000023511	SWT1	99	71.066	ENSMODG00000007472	SWT1	91	61.118	Monodelphis_domestica
ENSCHIG00000023511	SWT1	93	34.851	ENSMALG00000019308	swt1	57	35.221	Monopterus_albus
ENSCHIG00000023511	SWT1	99	79.492	MGP_CAROLIEiJ_G0014692	Swt1	95	70.609	Mus_caroli
ENSCHIG00000023511	SWT1	99	78.644	ENSMUSG00000052748	Swt1	93	70.106	Mus_musculus
ENSCHIG00000023511	SWT1	100	82.234	MGP_PahariEiJ_G0027928	Swt1	98	67.623	Mus_pahari
ENSCHIG00000023511	SWT1	99	79.661	MGP_SPRETEiJ_G0015499	Swt1	93	70.809	Mus_spretus
ENSCHIG00000023511	SWT1	100	84.941	ENSMPUG00000011913	SWT1	92	80.723	Mustela_putorius_furo
ENSCHIG00000023511	SWT1	100	82.403	ENSMLUG00000001142	SWT1	89	78.345	Myotis_lucifugus
ENSCHIG00000023511	SWT1	98	83.189	ENSNGAG00000021080	Swt1	91	76.077	Nannospalax_galili
ENSCHIG00000023511	SWT1	99	85.299	ENSNLEG00000018031	SWT1	91	79.879	Nomascus_leucogenys
ENSCHIG00000023511	SWT1	96	55.088	ENSMEUG00000000236	-	87	48.737	Notamacropus_eugenii
ENSCHIG00000023511	SWT1	78	93.548	ENSOPRG00000000692	SWT1	81	67.308	Ochotona_princeps
ENSCHIG00000023511	SWT1	93	31.894	ENSONIG00000009994	swt1	99	34.901	Oreochromis_niloticus
ENSCHIG00000023511	SWT1	99	64.000	ENSOANG00000001013	-	99	56.091	Ornithorhynchus_anatinus
ENSCHIG00000023511	SWT1	99	78.608	ENSOCUG00000004901	SWT1	93	69.586	Oryctolagus_cuniculus
ENSCHIG00000023511	SWT1	93	33.844	ENSORLG00000009682	swt1	59	33.844	Oryzias_latipes
ENSCHIG00000023511	SWT1	93	33.844	ENSORLG00020011654	swt1	59	33.844	Oryzias_latipes_hni
ENSCHIG00000023511	SWT1	93	33.898	ENSORLG00015007734	swt1	59	33.898	Oryzias_latipes_hsok
ENSCHIG00000023511	SWT1	93	34.655	ENSOMEG00000006607	swt1	57	34.655	Oryzias_melastigma
ENSCHIG00000023511	SWT1	100	84.095	ENSOGAG00000016195	SWT1	91	79.273	Otolemur_garnettii
ENSCHIG00000023511	SWT1	100	97.462	ENSOARG00000004156	SWT1	94	94.566	Ovis_aries
ENSCHIG00000023511	SWT1	99	85.983	ENSPPAG00000021400	SWT1	91	79.879	Pan_paniscus
ENSCHIG00000023511	SWT1	100	86.125	ENSPPRG00000023754	SWT1	91	82.203	Panthera_pardus
ENSCHIG00000023511	SWT1	100	85.956	ENSPTIG00000021889	SWT1	91	82.082	Panthera_tigris_altaica
ENSCHIG00000023511	SWT1	99	86.154	ENSPTRG00000001777	SWT1	91	80.000	Pan_troglodytes
ENSCHIG00000023511	SWT1	99	86.667	ENSPANG00000005099	SWT1	99	86.496	Papio_anubis
ENSCHIG00000023511	SWT1	95	36.395	ENSPKIG00000005979	swt1	59	36.731	Paramormyrops_kingsleyae
ENSCHIG00000023511	SWT1	98	56.734	ENSPSIG00000008961	SWT1	88	47.420	Pelodiscus_sinensis
ENSCHIG00000023511	SWT1	52	43.125	ENSPMGG00000000152	-	58	36.534	Periophthalmus_magnuspinnatus
ENSCHIG00000023511	SWT1	100	80.203	ENSPEMG00000008208	Swt1	91	73.150	Peromyscus_maniculatus_bairdii
ENSCHIG00000023511	SWT1	85	93.548	ENSPCIG00000002443	SWT1	92	75.573	Phascolarctos_cinereus
ENSCHIG00000023511	SWT1	93	32.242	ENSPFOG00000010988	-	69	32.504	Poecilia_formosa
ENSCHIG00000023511	SWT1	92	32.264	ENSPLAG00000022908	-	58	32.765	Poecilia_latipinna
ENSCHIG00000023511	SWT1	92	32.432	ENSPMEG00000006943	-	58	32.594	Poecilia_mexicana
ENSCHIG00000023511	SWT1	99	84.615	ENSPPYG00000000415	SWT1	91	79.152	Pongo_abelii
ENSCHIG00000023511	SWT1	89	83.417	ENSPCAG00000008337	SWT1	86	75.000	Procavia_capensis
ENSCHIG00000023511	SWT1	72	80.412	ENSPCOG00000018195	-	93	80.412	Propithecus_coquereli
ENSCHIG00000023511	SWT1	99	79.932	ENSPVAG00000005968	SWT1	80	79.917	Pteropus_vampyrus
ENSCHIG00000023511	SWT1	95	32.446	ENSPNYG00000012934	swt1	68	32.941	Pundamilia_nyererei
ENSCHIG00000023511	SWT1	97	37.329	ENSPNAG00000017795	swt1	63	36.656	Pygocentrus_nattereri
ENSCHIG00000023511	SWT1	100	82.403	ENSRNOG00000032258	Swt1	89	74.328	Rattus_norvegicus
ENSCHIG00000023511	SWT1	99	82.906	ENSRBIG00000040630	SWT1	99	82.935	Rhinopithecus_bieti
ENSCHIG00000023511	SWT1	93	76.471	ENSRROG00000028596	SWT1	95	76.617	Rhinopithecus_roxellana
ENSCHIG00000023511	SWT1	99	85.299	ENSSBOG00000028825	SWT1	93	78.960	Saimiri_boliviensis_boliviensis
ENSCHIG00000023511	SWT1	100	71.953	ENSSHAG00000009241	SWT1	88	62.149	Sarcophilus_harrisii
ENSCHIG00000023511	SWT1	96	38.581	ENSSFOG00015004895	swt1	57	39.437	Scleropages_formosus
ENSCHIG00000023511	SWT1	93	34.923	ENSSDUG00000012345	swt1	58	35.284	Seriola_dumerili
ENSCHIG00000023511	SWT1	93	34.753	ENSSLDG00000003821	swt1	58	35.112	Seriola_lalandi_dorsalis
ENSCHIG00000023511	SWT1	89	49.046	ENSSARG00000011524	-	99	50.769	Sorex_araneus
ENSCHIG00000023511	SWT1	97	53.445	ENSSPUG00000003899	SWT1	81	48.128	Sphenodon_punctatus
ENSCHIG00000023511	SWT1	93	32.479	ENSSPAG00000001030	swt1	58	32.815	Stegastes_partitus
ENSCHIG00000023511	SWT1	100	88.156	ENSSSCG00000015569	SWT1	94	84.342	Sus_scrofa
ENSCHIG00000023511	SWT1	95	52.035	ENSTGUG00000003718	-	100	52.773	Taeniopygia_guttata
ENSCHIG00000023511	SWT1	94	35.406	ENSTRUG00000006420	swt1	70	33.737	Takifugu_rubripes
ENSCHIG00000023511	SWT1	56	40.179	ENSTNIG00000018118	-	96	40.179	Tetraodon_nigroviridis
ENSCHIG00000023511	SWT1	100	83.756	ENSTTRG00000005914	SWT1	91	83.172	Tursiops_truncatus
ENSCHIG00000023511	SWT1	100	86.125	ENSUAMG00000020937	SWT1	99	81.961	Ursus_americanus
ENSCHIG00000023511	SWT1	100	86.125	ENSUMAG00000021918	SWT1	91	81.719	Ursus_maritimus
ENSCHIG00000023511	SWT1	83	100.000	ENSVPAG00000011855	SWT1	85	86.761	Vicugna_pacos
ENSCHIG00000023511	SWT1	100	87.817	ENSVVUG00000009182	SWT1	94	81.939	Vulpes_vulpes
ENSCHIG00000023511	SWT1	92	33.501	ENSXMAG00000023472	-	59	33.615	Xiphophorus_maculatus