EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000023549 (Gene tree)
Gene ID: 102170574
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 401185 bases
Position: chr25:6140800-6541984
Accession: 102170574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000027777	Fox-1_C	PF12414.8	1.8e-40	1	1
ENSCHIP00000027771	Fox-1_C	PF12414.8	2e-40	1	1
ENSCHIP00000027763	Fox-1_C	PF12414.8	2.3e-38	1	1
ENSCHIP00000027747	Fox-1_C	PF12414.8	2.5e-38	1	1
ENSCHIP00000027798	Fox-1_C	PF12414.8	4.6e-27	1	1
ENSCHIP00000027802	Fox-1_C	PF12414.8	4.7e-27	1	1
ENSCHIP00000027763	RRM_1	PF00076.22	2.8e-18	1	1
ENSCHIP00000027747	RRM_1	PF00076.22	3e-18	1	1
ENSCHIP00000027777	RRM_1	PF00076.22	3.2e-18	1	1
ENSCHIP00000027771	RRM_1	PF00076.22	3.3e-18	1	1
ENSCHIP00000027802	RRM_1	PF00076.22	4e-18	1	1
ENSCHIP00000027798	RRM_1	PF00076.22	4.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000035666	RBFOX1-205	1221	-	ENSCHIP00000027798	406 (aa)	-	UPI000D18F927
ENSCHIT00000035669	RBFOX1-206	1176	XM_018040928	ENSCHIP00000027802	391 (aa)	XP_017896417	UPI000D19190D
ENSCHIT00000035639	RBFOX1-203	4375	XM_018040924	ENSCHIP00000027771	376 (aa)	XP_017896413	UPI000D194FBA
ENSCHIT00000035615	RBFOX1-201	4364	XM_018040925	ENSCHIP00000027747	395 (aa)	XP_017896414	UPI000846DB03
ENSCHIT00000035631	RBFOX1-202	4378	-	ENSCHIP00000027763	377 (aa)	-	UPI000D18E87D
ENSCHIT00000035645	RBFOX1-204	4325	-	ENSCHIP00000027777	400 (aa)	-	UPI000D18EB86

Gene Model

Click here to download ENSCHIG00000023549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000023549	RBFOX1	91	55.422	ENSCHIG00000009124	RBFOX3	100	57.442
ENSCHIG00000023549	RBFOX1	100	61.446	ENSCHIG00000014027	RBFOX2	100	61.151

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023549	RBFOX1	100	98.481	ENSG00000078328	RBFOX1	100	98.481	Homo_sapiens
ENSCHIG00000023549	RBFOX1	100	73.684	ENSAPOG00000003197	rbfox1	100	73.445	Acanthochromis_polyacanthus
ENSCHIG00000023549	RBFOX1	63	96.400	ENSAMEG00000008605	RBFOX1	100	96.400	Ailuropoda_melanoleuca
ENSCHIG00000023549	RBFOX1	71	63.023	ENSACIG00000005478	rbfox1	68	62.987	Amphilophus_citrinellus
ENSCHIG00000023549	RBFOX1	80	70.347	ENSAOCG00000008283	rbfox1	99	70.032	Amphiprion_ocellaris
ENSCHIG00000023549	RBFOX1	95	70.712	ENSAPEG00000010636	rbfox1	100	70.341	Amphiprion_percula
ENSCHIG00000023549	RBFOX1	80	68.966	ENSATEG00000007513	rbfox1	99	68.652	Anabas_testudineus
ENSCHIG00000023549	RBFOX1	98	92.347	ENSAPLG00000013263	RBFOX1	98	92.347	Anas_platyrhynchos
ENSCHIG00000023549	RBFOX1	99	84.635	ENSACAG00000004013	RBFOX1	99	84.635	Anolis_carolinensis
ENSCHIG00000023549	RBFOX1	100	98.500	ENSANAG00000029527	RBFOX1	100	98.500	Aotus_nancymaae
ENSCHIG00000023549	RBFOX1	60	87.111	ENSAMXG00000002431	rbfox1	65	87.111	Astyanax_mexicanus
ENSCHIG00000023549	RBFOX1	100	99.500	ENSBTAG00000007210	RBFOX1	100	99.500	Bos_taurus
ENSCHIG00000023549	RBFOX1	98	98.462	ENSCJAG00000017351	RBFOX1	93	98.462	Callithrix_jacchus
ENSCHIG00000023549	RBFOX1	100	99.241	ENSCAFG00000019082	RBFOX1	100	99.241	Canis_familiaris
ENSCHIG00000023549	RBFOX1	100	85.823	ENSCAFG00020024881	RBFOX1	99	86.076	Canis_lupus_dingo
ENSCHIG00000023549	RBFOX1	97	98.630	ENSTSYG00000005334	RBFOX1	100	98.201	Carlito_syrichta
ENSCHIG00000023549	RBFOX1	98	98.205	ENSCAPG00000017669	RBFOX1	100	96.144	Cavia_aperea
ENSCHIG00000023549	RBFOX1	98	98.205	ENSCPOG00000011314	RBFOX1	100	95.420	Cavia_porcellus
ENSCHIG00000023549	RBFOX1	98	98.462	ENSCCAG00000023031	RBFOX1	93	98.462	Cebus_capucinus
ENSCHIG00000023549	RBFOX1	100	98.481	ENSCATG00000033816	RBFOX1	99	92.800	Cercocebus_atys
ENSCHIG00000023549	RBFOX1	100	97.606	ENSCLAG00000012761	RBFOX1	100	97.606	Chinchilla_lanigera
ENSCHIG00000023549	RBFOX1	100	98.936	ENSCSAG00000008739	RBFOX1	100	98.936	Chlorocebus_sabaeus
ENSCHIG00000023549	RBFOX1	98	75.765	ENSCHOG00000012843	RBFOX1	94	75.765	Choloepus_hoffmanni
ENSCHIG00000023549	RBFOX1	100	94.681	ENSCPBG00000026626	RBFOX1	100	94.681	Chrysemys_picta_bellii
ENSCHIG00000023549	RBFOX1	98	98.462	ENSCANG00000033125	RBFOX1	93	98.462	Colobus_angolensis_palliatus
ENSCHIG00000023549	RBFOX1	98	96.939	ENSCGRG00001013729	Rbfox1	99	94.416	Cricetulus_griseus_chok1gshd
ENSCHIG00000023549	RBFOX1	98	96.939	ENSCGRG00000003272	Rbfox1	99	94.416	Cricetulus_griseus_crigri
ENSCHIG00000023549	RBFOX1	95	69.095	ENSCSEG00000008840	rbfox1	100	69.095	Cynoglossus_semilaevis
ENSCHIG00000023549	RBFOX1	100	79.302	ENSDARG00000014746	rbfox1	100	86.341	Danio_rerio
ENSCHIG00000023549	RBFOX1	98	96.410	ENSDNOG00000043612	RBFOX1	94	96.410	Dasypus_novemcinctus
ENSCHIG00000023549	RBFOX1	98	93.384	ENSDORG00000010024	Rbfox1	98	92.424	Dipodomys_ordii
ENSCHIG00000023549	RBFOX1	98	77.179	ENSETEG00000003771	RBFOX1	93	77.179	Echinops_telfairi
ENSCHIG00000023549	RBFOX1	100	99.494	ENSEASG00005011599	RBFOX1	100	99.494	Equus_asinus_asinus
ENSCHIG00000023549	RBFOX1	100	99.241	ENSECAG00000012667	RBFOX1	100	99.241	Equus_caballus
ENSCHIG00000023549	RBFOX1	82	68.605	ENSELUG00000013096	rbfox1	97	68.605	Esox_lucius
ENSCHIG00000023549	RBFOX1	100	98.987	ENSFCAG00000025322	RBFOX1	100	98.936	Felis_catus
ENSCHIG00000023549	RBFOX1	86	95.046	ENSFALG00000004027	RBFOX1	97	95.046	Ficedula_albicollis
ENSCHIG00000023549	RBFOX1	98	98.718	ENSFDAG00000007388	RBFOX1	99	95.685	Fukomys_damarensis
ENSCHIG00000023549	RBFOX1	98	94.837	ENSGALG00000034325	RBFOX1	100	92.368	Gallus_gallus
ENSCHIG00000023549	RBFOX1	100	93.899	ENSGAGG00000023681	RBFOX1	100	93.899	Gopherus_agassizii
ENSCHIG00000023549	RBFOX1	98	98.462	ENSGGOG00000016871	-	99	92.875	Gorilla_gorilla
ENSCHIG00000023549	RBFOX1	100	97.872	ENSHGLG00000016944	RBFOX1	100	97.872	Heterocephalus_glaber_female
ENSCHIG00000023549	RBFOX1	100	97.872	ENSHGLG00100003272	RBFOX1	100	97.872	Heterocephalus_glaber_male
ENSCHIG00000023549	RBFOX1	85	70.115	ENSHCOG00000016419	rbfox1	91	70.115	Hippocampus_comes
ENSCHIG00000023549	RBFOX1	100	81.915	ENSIPUG00000015215	rbfox1	100	81.915	Ictalurus_punctatus
ENSCHIG00000023549	RBFOX1	100	97.340	ENSSTOG00000000322	RBFOX1	100	97.340	Ictidomys_tridecemlineatus
ENSCHIG00000023549	RBFOX1	98	94.359	ENSJJAG00000002575	Rbfox1	99	91.371	Jaculus_jaculus
ENSCHIG00000023549	RBFOX1	97	72.544	ENSLBEG00000014659	rbfox1	98	72.040	Labrus_bergylta
ENSCHIG00000023549	RBFOX1	98	84.733	ENSLOCG00000006675	rbfox1	98	84.733	Lepisosteus_oculatus
ENSCHIG00000023549	RBFOX1	77	99.026	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSCHIG00000023549	RBFOX1	98	98.205	ENSMFAG00000036447	RBFOX1	93	98.205	Macaca_fascicularis
ENSCHIG00000023549	RBFOX1	98	98.645	ENSMMUG00000003458	RBFOX1	99	98.645	Macaca_mulatta
ENSCHIG00000023549	RBFOX1	100	98.670	ENSMNEG00000032034	RBFOX1	93	98.205	Macaca_nemestrina
ENSCHIG00000023549	RBFOX1	98	98.462	ENSMLEG00000015382	RBFOX1	93	98.462	Mandrillus_leucophaeus
ENSCHIG00000023549	RBFOX1	95	72.519	ENSMAMG00000003142	rbfox1	100	73.028	Mastacembelus_armatus
ENSCHIG00000023549	RBFOX1	77	89.003	ENSMGAG00000008606	RBFOX1	98	88.811	Meleagris_gallopavo
ENSCHIG00000023549	RBFOX1	98	55.890	ENSMAUG00000020570	Rbfox1	97	55.639	Mesocricetus_auratus
ENSCHIG00000023549	RBFOX1	100	98.674	ENSMICG00000034286	RBFOX1	100	98.674	Microcebus_murinus
ENSCHIG00000023549	RBFOX1	98	96.939	ENSMOCG00000020932	Rbfox1	100	95.325	Microtus_ochrogaster
ENSCHIG00000023549	RBFOX1	85	71.471	ENSMMOG00000009716	rbfox1	86	70.882	Mola_mola
ENSCHIG00000023549	RBFOX1	94	97.740	ENSMODG00000005826	RBFOX1	100	97.740	Monodelphis_domestica
ENSCHIG00000023549	RBFOX1	98	73.762	ENSMALG00000003337	rbfox1	98	73.632	Monopterus_albus
ENSCHIG00000023549	RBFOX1	100	96.543	MGP_CAROLIEiJ_G0020427	Rbfox1	99	94.670	Mus_caroli
ENSCHIG00000023549	RBFOX1	98	96.939	ENSMUSG00000008658	Rbfox1	100	98.496	Mus_musculus
ENSCHIG00000023549	RBFOX1	100	96.277	MGP_PahariEiJ_G0016135	Rbfox1	99	94.670	Mus_pahari
ENSCHIG00000023549	RBFOX1	100	96.011	MGP_SPRETEiJ_G0021321	Rbfox1	99	94.162	Mus_spretus
ENSCHIG00000023549	RBFOX1	100	96.709	ENSMPUG00000014822	RBFOX1	100	96.709	Mustela_putorius_furo
ENSCHIG00000023549	RBFOX1	77	96.753	ENSMLUG00000015896	RBFOX1	100	96.753	Myotis_lucifugus
ENSCHIG00000023549	RBFOX1	98	97.704	ENSNGAG00000023276	Rbfox1	100	96.144	Nannospalax_galili
ENSCHIG00000023549	RBFOX1	98	59.903	ENSNBRG00000011084	rbfox1	95	59.903	Neolamprologus_brichardi
ENSCHIG00000023549	RBFOX1	98	98.205	ENSNLEG00000010017	-	93	98.205	Nomascus_leucogenys
ENSCHIG00000023549	RBFOX1	97	80.206	ENSMEUG00000012525	RBFOX1	93	80.206	Notamacropus_eugenii
ENSCHIG00000023549	RBFOX1	98	79.231	ENSOPRG00000006199	-	93	79.231	Ochotona_princeps
ENSCHIG00000023549	RBFOX1	98	97.436	ENSODEG00000013166	RBFOX1	99	94.416	Octodon_degus
ENSCHIG00000023549	RBFOX1	100	96.543	ENSOANG00000002379	RBFOX1	100	96.543	Ornithorhynchus_anatinus
ENSCHIG00000023549	RBFOX1	58	97.235	ENSOCUG00000001205	-	97	96.789	Oryctolagus_cuniculus
ENSCHIG00000023549	RBFOX1	99	95.431	ENSOGAG00000025535	RBFOX1	99	95.431	Otolemur_garnettii
ENSCHIG00000023549	RBFOX1	65	87.705	ENSOARG00000005135	RBFOX1	100	86.056	Ovis_aries
ENSCHIG00000023549	RBFOX1	97	98.907	ENSPPAG00000036238	-	100	98.907	Pan_paniscus
ENSCHIG00000023549	RBFOX1	98	98.462	ENSPPRG00000006546	RBFOX1	93	98.462	Panthera_pardus
ENSCHIG00000023549	RBFOX1	98	84.478	ENSPTIG00000021154	RBFOX1	100	83.503	Panthera_tigris_altaica
ENSCHIG00000023549	RBFOX1	98	98.462	ENSPTRG00000007744	RBFOX1	99	92.875	Pan_troglodytes
ENSCHIG00000023549	RBFOX1	98	98.462	ENSPANG00000026500	RBFOX1	99	92.800	Papio_anubis
ENSCHIG00000023549	RBFOX1	98	81.671	ENSPKIG00000009667	-	99	82.210	Paramormyrops_kingsleyae
ENSCHIG00000023549	RBFOX1	80	83.389	ENSPKIG00000019353	rbfox1	88	83.389	Paramormyrops_kingsleyae
ENSCHIG00000023549	RBFOX1	100	92.750	ENSPSIG00000006523	RBFOX1	100	92.750	Pelodiscus_sinensis
ENSCHIG00000023549	RBFOX1	98	97.194	ENSPEMG00000017607	Rbfox1	99	94.670	Peromyscus_maniculatus_bairdii
ENSCHIG00000023549	RBFOX1	73	92.123	ENSPCIG00000026887	RBFOX1	100	92.123	Phascolarctos_cinereus
ENSCHIG00000023549	RBFOX1	100	96.456	ENSPPYG00000007079	-	100	96.456	Pongo_abelii
ENSCHIG00000023549	RBFOX1	91	87.500	ENSPCAG00000002630	RBFOX1	95	87.500	Procavia_capensis
ENSCHIG00000023549	RBFOX1	98	98.462	ENSPCOG00000025687	RBFOX1	93	98.462	Propithecus_coquereli
ENSCHIG00000023549	RBFOX1	98	94.359	ENSPVAG00000013467	RBFOX1	93	94.359	Pteropus_vampyrus
ENSCHIG00000023549	RBFOX1	95	78.841	ENSPNAG00000023109	rbfox1	100	78.841	Pygocentrus_nattereri
ENSCHIG00000023549	RBFOX1	100	96.286	ENSRNOG00000002827	Rbfox1	100	96.286	Rattus_norvegicus
ENSCHIG00000023549	RBFOX1	100	98.939	ENSRBIG00000044478	RBFOX1	100	98.939	Rhinopithecus_bieti
ENSCHIG00000023549	RBFOX1	100	98.481	ENSRROG00000044411	RBFOX1	100	98.481	Rhinopithecus_roxellana
ENSCHIG00000023549	RBFOX1	100	98.734	ENSSBOG00000033726	RBFOX1	100	98.734	Saimiri_boliviensis_boliviensis
ENSCHIG00000023549	RBFOX1	97	91.774	ENSSHAG00000009257	RBFOX1	100	90.423	Sarcophilus_harrisii
ENSCHIG00000023549	RBFOX1	87	87.778	ENSSFOG00015023675	rbfox1	100	87.778	Scleropages_formosus
ENSCHIG00000023549	RBFOX1	88	70.083	ENSSFOG00015009955	-	84	70.083	Scleropages_formosus
ENSCHIG00000023549	RBFOX1	98	74.328	ENSSMAG00000015505	rbfox1	93	74.083	Scophthalmus_maximus
ENSCHIG00000023549	RBFOX1	98	73.418	ENSSDUG00000016413	rbfox1	99	72.911	Seriola_dumerili
ENSCHIG00000023549	RBFOX1	85	71.554	ENSSLDG00000009353	rbfox1	95	71.646	Seriola_lalandi_dorsalis
ENSCHIG00000023549	RBFOX1	85	82.405	ENSSPUG00000009732	RBFOX1	87	82.405	Sphenodon_punctatus
ENSCHIG00000023549	RBFOX1	97	73.710	ENSSPAG00000009723	rbfox1	100	73.464	Stegastes_partitus
ENSCHIG00000023549	RBFOX1	100	99.494	ENSSSCG00000007917	RBFOX1	100	99.435	Sus_scrofa
ENSCHIG00000023549	RBFOX1	98	92.821	ENSTGUG00000004562	RBFOX1	100	92.821	Taeniopygia_guttata
ENSCHIG00000023549	RBFOX1	98	73.902	ENSTRUG00000020940	rbfox1	100	73.659	Takifugu_rubripes
ENSCHIG00000023549	RBFOX1	67	54.921	ENSTNIG00000002567	rbfox1	100	56.508	Tetraodon_nigroviridis
ENSCHIG00000023549	RBFOX1	69	89.655	ENSTBEG00000009169	-	65	89.655	Tupaia_belangeri
ENSCHIG00000023549	RBFOX1	98	99.487	ENSTTRG00000005700	RBFOX1	93	99.487	Tursiops_truncatus
ENSCHIG00000023549	RBFOX1	100	94.430	ENSUAMG00000024633	RBFOX1	99	94.430	Ursus_americanus
ENSCHIG00000023549	RBFOX1	100	85.570	ENSUMAG00000003579	RBFOX1	99	85.570	Ursus_maritimus
ENSCHIG00000023549	RBFOX1	77	99.675	ENSVPAG00000001284	RBFOX1	74	99.675	Vicugna_pacos
ENSCHIG00000023549	RBFOX1	100	98.670	ENSVVUG00000017311	RBFOX1	100	98.670	Vulpes_vulpes