EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000023658 (Gene tree)
Gene ID: 102171279
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 52999 bases
Position: chr21:33440003-33493001
Accession: 102171279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000027930	FDF	PF09532.10	8.2e-18	1	1
ENSCHIP00000027930	LSM14	PF12701.7	7.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000035799	EDC3-201	2091	XM_005695141	ENSCHIP00000027930	508 (aa)	XP_005695198	UPI00029D66C6

Gene Model

Click here to download ENSCHIG00000023658's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023658	EDC3	100	97.047	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSCHIG00000023658	EDC3	100	55.922	ENSAPOG00000008655	EDC3	100	55.922	Acanthochromis_polyacanthus
ENSCHIG00000023658	EDC3	100	70.196	ENSAPOG00000010791	edc3	100	70.196	Acanthochromis_polyacanthus
ENSCHIG00000023658	EDC3	100	96.850	ENSAMEG00000008963	EDC3	100	96.850	Ailuropoda_melanoleuca
ENSCHIG00000023658	EDC3	99	59.454	ENSACIG00000005330	EDC3	99	59.454	Amphilophus_citrinellus
ENSCHIG00000023658	EDC3	100	68.566	ENSACIG00000017751	edc3	100	68.566	Amphilophus_citrinellus
ENSCHIG00000023658	EDC3	100	70.196	ENSAOCG00000005431	edc3	100	70.196	Amphiprion_ocellaris
ENSCHIG00000023658	EDC3	100	58.333	ENSAOCG00000009103	-	100	58.333	Amphiprion_ocellaris
ENSCHIG00000023658	EDC3	100	70.196	ENSAPEG00000000968	edc3	100	70.196	Amphiprion_percula
ENSCHIG00000023658	EDC3	100	58.333	ENSAPEG00000007841	EDC3	100	58.333	Amphiprion_percula
ENSCHIG00000023658	EDC3	100	59.048	ENSATEG00000004205	-	100	59.048	Anabas_testudineus
ENSCHIG00000023658	EDC3	100	70.138	ENSATEG00000015505	edc3	100	70.138	Anabas_testudineus
ENSCHIG00000023658	EDC3	90	87.253	ENSAPLG00000008957	EDC3	100	87.253	Anas_platyrhynchos
ENSCHIG00000023658	EDC3	78	87.154	ENSACAG00000000460	-	100	87.154	Anolis_carolinensis
ENSCHIG00000023658	EDC3	100	96.850	ENSANAG00000024078	EDC3	100	96.850	Aotus_nancymaae
ENSCHIG00000023658	EDC3	100	67.583	ENSACLG00000007232	edc3	100	67.583	Astatotilapia_calliptera
ENSCHIG00000023658	EDC3	99	58.674	ENSACLG00000018776	-	99	58.674	Astatotilapia_calliptera
ENSCHIG00000023658	EDC3	100	70.175	ENSAMXG00000001589	edc3	100	70.175	Astyanax_mexicanus
ENSCHIG00000023658	EDC3	100	99.409	ENSBTAG00000007308	EDC3	100	99.409	Bos_taurus
ENSCHIG00000023658	EDC3	100	97.047	ENSCJAG00000017681	EDC3	100	97.047	Callithrix_jacchus
ENSCHIG00000023658	EDC3	100	96.654	ENSCAFG00000017935	EDC3	100	96.654	Canis_familiaris
ENSCHIG00000023658	EDC3	100	96.654	ENSCAFG00020003909	EDC3	100	96.654	Canis_lupus_dingo
ENSCHIG00000023658	EDC3	100	96.260	ENSTSYG00000004822	EDC3	100	96.260	Carlito_syrichta
ENSCHIG00000023658	EDC3	100	95.276	ENSCPOG00000015595	EDC3	100	95.276	Cavia_porcellus
ENSCHIG00000023658	EDC3	100	97.244	ENSCCAG00000021663	EDC3	100	97.244	Cebus_capucinus
ENSCHIG00000023658	EDC3	100	96.850	ENSCATG00000037511	EDC3	100	96.850	Cercocebus_atys
ENSCHIG00000023658	EDC3	100	95.276	ENSCLAG00000005700	EDC3	100	95.276	Chinchilla_lanigera
ENSCHIG00000023658	EDC3	100	96.850	ENSCSAG00000014239	EDC3	100	96.850	Chlorocebus_sabaeus
ENSCHIG00000023658	EDC3	100	89.370	ENSCPBG00000024239	EDC3	100	89.370	Chrysemys_picta_bellii
ENSCHIG00000023658	EDC3	100	38.077	ENSCING00000022142	-	99	38.077	Ciona_intestinalis
ENSCHIG00000023658	EDC3	100	96.850	ENSCANG00000028699	EDC3	100	96.850	Colobus_angolensis_palliatus
ENSCHIG00000023658	EDC3	100	96.654	ENSCGRG00001013874	Edc3	100	96.654	Cricetulus_griseus_chok1gshd
ENSCHIG00000023658	EDC3	100	96.654	ENSCGRG00000011885	Edc3	100	96.654	Cricetulus_griseus_crigri
ENSCHIG00000023658	EDC3	99	69.488	ENSCSEG00000012996	edc3	99	69.488	Cynoglossus_semilaevis
ENSCHIG00000023658	EDC3	100	69.608	ENSCVAG00000008023	edc3	100	69.608	Cyprinodon_variegatus
ENSCHIG00000023658	EDC3	99	68.824	ENSDARG00000051931	edc3	99	69.216	Danio_rerio
ENSCHIG00000023658	EDC3	100	84.302	ENSDNOG00000030661	EDC3	100	84.302	Dasypus_novemcinctus
ENSCHIG00000023658	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSCHIG00000023658	EDC3	100	97.047	ENSEASG00005005071	EDC3	100	97.047	Equus_asinus_asinus
ENSCHIG00000023658	EDC3	100	97.047	ENSECAG00000017994	EDC3	100	97.047	Equus_caballus
ENSCHIG00000023658	EDC3	100	62.840	ENSELUG00000007607	EDC3	100	62.840	Esox_lucius
ENSCHIG00000023658	EDC3	100	65.497	ENSELUG00000005794	edc3	100	65.497	Esox_lucius
ENSCHIG00000023658	EDC3	100	96.260	ENSFCAG00000002014	EDC3	100	96.260	Felis_catus
ENSCHIG00000023658	EDC3	98	85.371	ENSFALG00000004543	EDC3	96	85.371	Ficedula_albicollis
ENSCHIG00000023658	EDC3	100	94.488	ENSFDAG00000012582	EDC3	100	94.488	Fukomys_damarensis
ENSCHIG00000023658	EDC3	100	70.000	ENSFHEG00000009375	edc3	100	70.000	Fundulus_heteroclitus
ENSCHIG00000023658	EDC3	100	68.359	ENSGMOG00000002715	edc3	100	68.359	Gadus_morhua
ENSCHIG00000023658	EDC3	100	88.583	ENSGALG00000040181	EDC3	100	88.583	Gallus_gallus
ENSCHIG00000023658	EDC3	100	68.173	ENSGAFG00000014433	edc3	100	68.173	Gambusia_affinis
ENSCHIG00000023658	EDC3	100	68.369	ENSGACG00000009783	edc3	100	68.369	Gasterosteus_aculeatus
ENSCHIG00000023658	EDC3	99	55.662	ENSGACG00000014671	EDC3	99	56.335	Gasterosteus_aculeatus
ENSCHIG00000023658	EDC3	100	88.976	ENSGAGG00000023477	EDC3	100	88.976	Gopherus_agassizii
ENSCHIG00000023658	EDC3	100	97.244	ENSGGOG00000003552	EDC3	100	97.244	Gorilla_gorilla
ENSCHIG00000023658	EDC3	100	67.583	ENSHBUG00000003635	edc3	100	67.583	Haplochromis_burtoni
ENSCHIG00000023658	EDC3	99	58.674	ENSHBUG00000020817	EDC3	99	58.674	Haplochromis_burtoni
ENSCHIG00000023658	EDC3	100	67.515	ENSHCOG00000016834	edc3	100	68.885	Hippocampus_comes
ENSCHIG00000023658	EDC3	99	70.450	ENSIPUG00000005695	edc3	100	70.450	Ictalurus_punctatus
ENSCHIG00000023658	EDC3	100	97.047	ENSSTOG00000013936	EDC3	100	97.047	Ictidomys_tridecemlineatus
ENSCHIG00000023658	EDC3	100	96.457	ENSJJAG00000008074	Edc3	100	96.457	Jaculus_jaculus
ENSCHIG00000023658	EDC3	100	55.512	ENSKMAG00000001987	EDC3	100	55.512	Kryptolebias_marmoratus
ENSCHIG00000023658	EDC3	100	69.352	ENSKMAG00000001243	edc3	100	69.352	Kryptolebias_marmoratus
ENSCHIG00000023658	EDC3	100	69.020	ENSLBEG00000013435	edc3	99	69.020	Labrus_bergylta
ENSCHIG00000023658	EDC3	100	59.302	ENSLBEG00000017984	EDC3	100	59.302	Labrus_bergylta
ENSCHIG00000023658	EDC3	100	77.670	ENSLACG00000014149	EDC3	100	77.670	Latimeria_chalumnae
ENSCHIG00000023658	EDC3	99	67.383	ENSLOCG00000014625	edc3	99	67.446	Lepisosteus_oculatus
ENSCHIG00000023658	EDC3	100	96.063	ENSLAFG00000002992	EDC3	100	96.063	Loxodonta_africana
ENSCHIG00000023658	EDC3	100	96.654	ENSMFAG00000043074	EDC3	100	96.654	Macaca_fascicularis
ENSCHIG00000023658	EDC3	100	96.654	ENSMMUG00000011071	EDC3	100	96.654	Macaca_mulatta
ENSCHIG00000023658	EDC3	100	96.654	ENSMNEG00000035316	EDC3	100	96.654	Macaca_nemestrina
ENSCHIG00000023658	EDC3	100	96.850	ENSMLEG00000030372	EDC3	100	96.850	Mandrillus_leucophaeus
ENSCHIG00000023658	EDC3	99	57.227	ENSMAMG00000005423	-	99	57.227	Mastacembelus_armatus
ENSCHIG00000023658	EDC3	100	69.941	ENSMAMG00000000505	edc3	100	69.941	Mastacembelus_armatus
ENSCHIG00000023658	EDC3	99	58.789	ENSMZEG00005005654	EDC3	99	58.789	Maylandia_zebra
ENSCHIG00000023658	EDC3	100	67.583	ENSMZEG00005004892	edc3	100	67.583	Maylandia_zebra
ENSCHIG00000023658	EDC3	100	87.598	ENSMGAG00000002617	EDC3	100	87.598	Meleagris_gallopavo
ENSCHIG00000023658	EDC3	100	96.260	ENSMICG00000043190	EDC3	100	96.260	Microcebus_murinus
ENSCHIG00000023658	EDC3	100	96.260	ENSMOCG00000016205	Edc3	100	96.260	Microtus_ochrogaster
ENSCHIG00000023658	EDC3	99	69.155	ENSMMOG00000012278	edc3	99	69.155	Mola_mola
ENSCHIG00000023658	EDC3	100	92.717	ENSMODG00000009442	EDC3	100	92.717	Monodelphis_domestica
ENSCHIG00000023658	EDC3	100	69.412	ENSMALG00000008658	edc3	100	69.745	Monopterus_albus
ENSCHIG00000023658	EDC3	100	95.669	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSCHIG00000023658	EDC3	100	95.669	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSCHIG00000023658	EDC3	100	95.866	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSCHIG00000023658	EDC3	100	95.472	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSCHIG00000023658	EDC3	100	96.654	ENSMPUG00000017293	EDC3	100	96.654	Mustela_putorius_furo
ENSCHIG00000023658	EDC3	100	96.078	ENSMLUG00000016382	EDC3	100	96.078	Myotis_lucifugus
ENSCHIG00000023658	EDC3	100	95.669	ENSNGAG00000010923	Edc3	100	95.669	Nannospalax_galili
ENSCHIG00000023658	EDC3	99	58.984	ENSNBRG00000007881	EDC3	99	58.984	Neolamprologus_brichardi
ENSCHIG00000023658	EDC3	100	67.780	ENSNBRG00000002434	edc3	100	67.780	Neolamprologus_brichardi
ENSCHIG00000023658	EDC3	100	87.598	ENSNLEG00000014577	EDC3	100	87.598	Nomascus_leucogenys
ENSCHIG00000023658	EDC3	100	91.339	ENSMEUG00000009077	EDC3	100	91.339	Notamacropus_eugenii
ENSCHIG00000023658	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSCHIG00000023658	EDC3	100	67.780	ENSONIG00000008434	edc3	100	67.780	Oreochromis_niloticus
ENSCHIG00000023658	EDC3	100	60.117	ENSONIG00000002932	-	100	60.117	Oreochromis_niloticus
ENSCHIG00000023658	EDC3	78	92.191	ENSOCUG00000017740	EDC3	86	92.191	Oryctolagus_cuniculus
ENSCHIG00000023658	EDC3	100	57.031	ENSORLG00000014399	-	98	57.031	Oryzias_latipes
ENSCHIG00000023658	EDC3	100	67.387	ENSORLG00000004883	edc3	100	67.387	Oryzias_latipes
ENSCHIG00000023658	EDC3	100	57.031	ENSORLG00020019446	-	100	57.031	Oryzias_latipes_hni
ENSCHIG00000023658	EDC3	100	67.387	ENSORLG00020012262	edc3	100	67.387	Oryzias_latipes_hni
ENSCHIG00000023658	EDC3	100	56.641	ENSORLG00015017635	-	96	56.641	Oryzias_latipes_hsok
ENSCHIG00000023658	EDC3	100	67.188	ENSORLG00015005634	edc3	100	67.188	Oryzias_latipes_hsok
ENSCHIG00000023658	EDC3	100	57.031	ENSOMEG00000017354	EDC3	100	57.031	Oryzias_melastigma
ENSCHIG00000023658	EDC3	100	68.762	ENSOMEG00000014026	edc3	100	68.762	Oryzias_melastigma
ENSCHIG00000023658	EDC3	100	96.457	ENSOGAG00000014441	EDC3	100	96.457	Otolemur_garnettii
ENSCHIG00000023658	EDC3	100	99.607	ENSOARG00000003476	EDC3	100	99.607	Ovis_aries
ENSCHIG00000023658	EDC3	100	97.244	ENSPPAG00000040143	EDC3	100	97.244	Pan_paniscus
ENSCHIG00000023658	EDC3	100	96.654	ENSPPRG00000006257	EDC3	100	96.654	Panthera_pardus
ENSCHIG00000023658	EDC3	100	96.654	ENSPTIG00000017424	EDC3	100	96.654	Panthera_tigris_altaica
ENSCHIG00000023658	EDC3	100	97.244	ENSPTRG00000007279	EDC3	100	97.244	Pan_troglodytes
ENSCHIG00000023658	EDC3	100	96.850	ENSPANG00000015997	EDC3	100	96.850	Papio_anubis
ENSCHIG00000023658	EDC3	100	66.602	ENSPKIG00000019810	EDC3	100	66.602	Paramormyrops_kingsleyae
ENSCHIG00000023658	EDC3	100	68.164	ENSPKIG00000004416	edc3	100	69.141	Paramormyrops_kingsleyae
ENSCHIG00000023658	EDC3	100	83.465	ENSPSIG00000008474	EDC3	100	83.465	Pelodiscus_sinensis
ENSCHIG00000023658	EDC3	100	67.515	ENSPMGG00000007223	edc3	100	67.515	Periophthalmus_magnuspinnatus
ENSCHIG00000023658	EDC3	100	96.260	ENSPEMG00000015260	Edc3	100	96.260	Peromyscus_maniculatus_bairdii
ENSCHIG00000023658	EDC3	100	90.551	ENSPCIG00000006276	EDC3	70	90.730	Phascolarctos_cinereus
ENSCHIG00000023658	EDC3	100	69.261	ENSPFOG00000012204	edc3	100	69.548	Poecilia_formosa
ENSCHIG00000023658	EDC3	100	69.261	ENSPLAG00000014420	edc3	100	69.548	Poecilia_latipinna
ENSCHIG00000023658	EDC3	100	69.261	ENSPMEG00000023289	edc3	100	69.548	Poecilia_mexicana
ENSCHIG00000023658	EDC3	100	69.548	ENSPREG00000016022	edc3	100	69.548	Poecilia_reticulata
ENSCHIG00000023658	EDC3	100	96.063	ENSPPYG00000006642	EDC3	100	96.063	Pongo_abelii
ENSCHIG00000023658	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSCHIG00000023658	EDC3	100	96.457	ENSPCOG00000013364	EDC3	100	96.457	Propithecus_coquereli
ENSCHIG00000023658	EDC3	100	96.260	ENSPVAG00000014733	EDC3	100	96.260	Pteropus_vampyrus
ENSCHIG00000023658	EDC3	100	67.583	ENSPNYG00000021797	edc3	100	67.583	Pundamilia_nyererei
ENSCHIG00000023658	EDC3	99	58.674	ENSPNYG00000009669	EDC3	99	58.674	Pundamilia_nyererei
ENSCHIG00000023658	EDC3	100	69.786	ENSPNAG00000019657	edc3	100	70.175	Pygocentrus_nattereri
ENSCHIG00000023658	EDC3	99	96.238	ENSRNOG00000019579	Edc3	99	96.238	Rattus_norvegicus
ENSCHIG00000023658	EDC3	100	96.457	ENSRBIG00000019488	EDC3	100	96.457	Rhinopithecus_bieti
ENSCHIG00000023658	EDC3	100	96.457	ENSRROG00000034959	EDC3	100	96.457	Rhinopithecus_roxellana
ENSCHIG00000023658	EDC3	100	97.244	ENSSBOG00000004896	EDC3	100	97.244	Saimiri_boliviensis_boliviensis
ENSCHIG00000023658	EDC3	96	91.411	ENSSHAG00000015075	EDC3	95	91.411	Sarcophilus_harrisii
ENSCHIG00000023658	EDC3	100	62.157	ENSSFOG00015002439	edc3	100	65.564	Scleropages_formosus
ENSCHIG00000023658	EDC3	100	70.817	ENSSFOG00015016939	edc3	100	71.012	Scleropages_formosus
ENSCHIG00000023658	EDC3	99	57.834	ENSSMAG00000010176	-	99	57.834	Scophthalmus_maximus
ENSCHIG00000023658	EDC3	100	68.959	ENSSMAG00000010695	edc3	100	69.745	Scophthalmus_maximus
ENSCHIG00000023658	EDC3	100	59.423	ENSSDUG00000007671	EDC3	100	59.808	Seriola_dumerili
ENSCHIG00000023658	EDC3	100	69.412	ENSSDUG00000021844	edc3	100	70.138	Seriola_dumerili
ENSCHIG00000023658	EDC3	100	69.412	ENSSLDG00000022046	edc3	100	70.138	Seriola_lalandi_dorsalis
ENSCHIG00000023658	EDC3	81	96.371	ENSSARG00000003907	EDC3	80	96.371	Sorex_araneus
ENSCHIG00000023658	EDC3	100	88.583	ENSSPUG00000008232	EDC3	100	88.583	Sphenodon_punctatus
ENSCHIG00000023658	EDC3	100	70.392	ENSSPAG00000010009	edc3	100	70.392	Stegastes_partitus
ENSCHIG00000023658	EDC3	100	57.977	ENSSPAG00000020327	EDC3	100	58.171	Stegastes_partitus
ENSCHIG00000023658	EDC3	100	96.850	ENSSSCG00000001903	EDC3	100	96.850	Sus_scrofa
ENSCHIG00000023658	EDC3	100	88.583	ENSTGUG00000004007	EDC3	100	88.583	Taeniopygia_guttata
ENSCHIG00000023658	EDC3	100	70.138	ENSTRUG00000017078	edc3	100	70.138	Takifugu_rubripes
ENSCHIG00000023658	EDC3	100	68.689	ENSTNIG00000016047	edc3	100	68.689	Tetraodon_nigroviridis
ENSCHIG00000023658	EDC3	100	96.654	ENSTTRG00000007990	EDC3	100	96.654	Tursiops_truncatus
ENSCHIG00000023658	EDC3	100	96.850	ENSUAMG00000026710	-	100	96.850	Ursus_americanus
ENSCHIG00000023658	EDC3	100	96.850	ENSUMAG00000005006	EDC3	96	96.850	Ursus_maritimus
ENSCHIG00000023658	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSCHIG00000023658	EDC3	100	96.850	ENSVVUG00000018601	EDC3	100	96.850	Vulpes_vulpes
ENSCHIG00000023658	EDC3	68	82.759	ENSXETG00000010622	edc3	99	83.908	Xenopus_tropicalis
ENSCHIG00000023658	EDC3	100	69.352	ENSXMAG00000007377	edc3	100	69.352	Xiphophorus_maculatus