EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000023848 (Gene tree)
Gene ID: 102190078
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 27357 bases
Position: chr21:56291619-56318975
Accession: 102190078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000028260	Beta-Casp	PF10996.8	1.1e-20	1	1
ENSCHIP00000028260	Lactamase_B	PF00753.27	1.8e-06	1	1
ENSCHIP00000028260	RMMBL	PF07521.12	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000036130	CPSF2-201	2444	XM_005695329	ENSCHIP00000028260	782 (aa)	XP_005695386	UPI00001282EF

Gene Model

Click here to download ENSCHIG00000023848's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023848	CPSF2	100	99.616	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSCHIG00000023848	CPSF2	100	85.932	ENSAPOG00000001242	cpsf2	100	85.932	Acanthochromis_polyacanthus
ENSCHIG00000023848	CPSF2	100	86.329	ENSACIG00000009331	cpsf2	100	86.329	Amphilophus_citrinellus
ENSCHIG00000023848	CPSF2	100	86.058	ENSAOCG00000014095	cpsf2	100	86.058	Amphiprion_ocellaris
ENSCHIG00000023848	CPSF2	100	86.058	ENSAPEG00000009158	cpsf2	100	86.058	Amphiprion_percula
ENSCHIG00000023848	CPSF2	96	86.316	ENSATEG00000017644	cpsf2	100	84.474	Anabas_testudineus
ENSCHIG00000023848	CPSF2	100	96.433	ENSAPLG00000006330	CPSF2	100	96.433	Anas_platyrhynchos
ENSCHIG00000023848	CPSF2	100	95.402	ENSACAG00000009245	CPSF2	100	95.402	Anolis_carolinensis
ENSCHIG00000023848	CPSF2	100	99.616	ENSANAG00000022915	CPSF2	100	99.616	Aotus_nancymaae
ENSCHIG00000023848	CPSF2	100	85.769	ENSAMXG00000018696	cpsf2	100	85.769	Astyanax_mexicanus
ENSCHIG00000023848	CPSF2	100	100.000	ENSBTAG00000010227	CPSF2	100	100.000	Bos_taurus
ENSCHIG00000023848	CPSF2	100	41.569	WBGene00017313	cpsf-2	100	41.032	Caenorhabditis_elegans
ENSCHIG00000023848	CPSF2	100	99.616	ENSCJAG00000018069	CPSF2	100	99.616	Callithrix_jacchus
ENSCHIG00000023848	CPSF2	100	99.616	ENSCAFG00000010909	CPSF2	100	99.616	Canis_familiaris
ENSCHIG00000023848	CPSF2	100	99.616	ENSCAFG00020020670	CPSF2	100	99.616	Canis_lupus_dingo
ENSCHIG00000023848	CPSF2	100	98.465	ENSTSYG00000009036	CPSF2	100	98.465	Carlito_syrichta
ENSCHIG00000023848	CPSF2	100	99.744	ENSCPOG00000010899	CPSF2	100	99.744	Cavia_porcellus
ENSCHIG00000023848	CPSF2	100	99.616	ENSCCAG00000028088	CPSF2	100	99.616	Cebus_capucinus
ENSCHIG00000023848	CPSF2	100	99.744	ENSCATG00000030132	CPSF2	100	99.744	Cercocebus_atys
ENSCHIG00000023848	CPSF2	100	99.616	ENSCLAG00000012404	CPSF2	100	99.616	Chinchilla_lanigera
ENSCHIG00000023848	CPSF2	100	99.744	ENSCSAG00000011300	CPSF2	100	99.744	Chlorocebus_sabaeus
ENSCHIG00000023848	CPSF2	100	92.967	ENSCHOG00000012904	CPSF2	100	92.967	Choloepus_hoffmanni
ENSCHIG00000023848	CPSF2	100	96.552	ENSCPBG00000008766	CPSF2	97	96.552	Chrysemys_picta_bellii
ENSCHIG00000023848	CPSF2	100	54.919	ENSCING00000007881	-	100	54.545	Ciona_intestinalis
ENSCHIG00000023848	CPSF2	94	99.727	ENSCANG00000041651	CPSF2	100	99.727	Colobus_angolensis_palliatus
ENSCHIG00000023848	CPSF2	100	98.721	ENSCGRG00001006901	Cpsf2	100	98.721	Cricetulus_griseus_chok1gshd
ENSCHIG00000023848	CPSF2	100	98.721	ENSCGRG00000012416	Cpsf2	100	98.721	Cricetulus_griseus_crigri
ENSCHIG00000023848	CPSF2	100	83.904	ENSCSEG00000004116	cpsf2	100	83.904	Cynoglossus_semilaevis
ENSCHIG00000023848	CPSF2	100	85.298	ENSCVAG00000000095	cpsf2	100	85.425	Cyprinodon_variegatus
ENSCHIG00000023848	CPSF2	100	85.696	ENSDARG00000028971	cpsf2	100	85.696	Danio_rerio
ENSCHIG00000023848	CPSF2	100	99.488	ENSDNOG00000042757	CPSF2	100	99.488	Dasypus_novemcinctus
ENSCHIG00000023848	CPSF2	100	99.361	ENSDORG00000013709	Cpsf2	100	99.361	Dipodomys_ordii
ENSCHIG00000023848	CPSF2	100	53.923	FBgn0027873	Cpsf100	100	53.683	Drosophila_melanogaster
ENSCHIG00000023848	CPSF2	100	90.294	ENSETEG00000012123	CPSF2	100	90.294	Echinops_telfairi
ENSCHIG00000023848	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSCHIG00000023848	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSCHIG00000023848	CPSF2	100	99.488	ENSECAG00000023935	CPSF2	100	99.488	Equus_caballus
ENSCHIG00000023848	CPSF2	100	84.191	ENSELUG00000008442	cpsf2	100	84.191	Esox_lucius
ENSCHIG00000023848	CPSF2	100	99.488	ENSFCAG00000007886	CPSF2	100	99.488	Felis_catus
ENSCHIG00000023848	CPSF2	100	96.679	ENSFALG00000002412	CPSF2	100	96.679	Ficedula_albicollis
ENSCHIG00000023848	CPSF2	100	99.616	ENSFDAG00000006327	CPSF2	100	99.616	Fukomys_damarensis
ENSCHIG00000023848	CPSF2	96	84.575	ENSFHEG00000015465	cpsf2	98	84.837	Fundulus_heteroclitus
ENSCHIG00000023848	CPSF2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSCHIG00000023848	CPSF2	100	95.913	ENSGALG00000010783	CPSF2	100	96.424	Gallus_gallus
ENSCHIG00000023848	CPSF2	100	85.551	ENSGAFG00000001407	cpsf2	100	85.551	Gambusia_affinis
ENSCHIG00000023848	CPSF2	100	84.664	ENSGACG00000008418	cpsf2	100	84.664	Gasterosteus_aculeatus
ENSCHIG00000023848	CPSF2	100	96.679	ENSGAGG00000008287	CPSF2	100	96.679	Gopherus_agassizii
ENSCHIG00000023848	CPSF2	100	99.616	ENSGGOG00000011799	CPSF2	100	99.616	Gorilla_gorilla
ENSCHIG00000023848	CPSF2	100	85.298	ENSHBUG00000023466	cpsf2	100	85.298	Haplochromis_burtoni
ENSCHIG00000023848	CPSF2	100	99.488	ENSHGLG00000018311	CPSF2	100	99.488	Heterocephalus_glaber_female
ENSCHIG00000023848	CPSF2	100	99.488	ENSHGLG00100016460	CPSF2	100	99.488	Heterocephalus_glaber_male
ENSCHIG00000023848	CPSF2	100	84.664	ENSHCOG00000019527	cpsf2	98	84.664	Hippocampus_comes
ENSCHIG00000023848	CPSF2	100	85.769	ENSIPUG00000020857	cpsf2	100	85.769	Ictalurus_punctatus
ENSCHIG00000023848	CPSF2	100	99.616	ENSSTOG00000009528	CPSF2	100	99.616	Ictidomys_tridecemlineatus
ENSCHIG00000023848	CPSF2	100	99.488	ENSJJAG00000017925	Cpsf2	100	99.488	Jaculus_jaculus
ENSCHIG00000023848	CPSF2	100	84.791	ENSKMAG00000019429	cpsf2	100	84.791	Kryptolebias_marmoratus
ENSCHIG00000023848	CPSF2	95	84.203	ENSLBEG00000011585	cpsf2	100	84.358	Labrus_bergylta
ENSCHIG00000023848	CPSF2	100	89.655	ENSLACG00000019024	CPSF2	100	90.166	Latimeria_chalumnae
ENSCHIG00000023848	CPSF2	100	87.579	ENSLOCG00000014102	cpsf2	100	87.579	Lepisosteus_oculatus
ENSCHIG00000023848	CPSF2	100	99.235	ENSLAFG00000004891	CPSF2	100	99.235	Loxodonta_africana
ENSCHIG00000023848	CPSF2	100	99.744	ENSMFAG00000041212	CPSF2	100	99.744	Macaca_fascicularis
ENSCHIG00000023848	CPSF2	100	99.744	ENSMMUG00000000699	CPSF2	100	99.744	Macaca_mulatta
ENSCHIG00000023848	CPSF2	100	99.744	ENSMNEG00000031584	CPSF2	100	99.744	Macaca_nemestrina
ENSCHIG00000023848	CPSF2	100	99.744	ENSMLEG00000029394	CPSF2	100	99.744	Mandrillus_leucophaeus
ENSCHIG00000023848	CPSF2	100	85.932	ENSMAMG00000004235	cpsf2	100	85.932	Mastacembelus_armatus
ENSCHIG00000023848	CPSF2	100	85.425	ENSMZEG00005001769	cpsf2	100	85.425	Maylandia_zebra
ENSCHIG00000023848	CPSF2	100	95.918	ENSMGAG00000013122	CPSF2	100	96.429	Meleagris_gallopavo
ENSCHIG00000023848	CPSF2	100	98.721	ENSMAUG00000015160	Cpsf2	100	98.721	Mesocricetus_auratus
ENSCHIG00000023848	CPSF2	100	99.616	ENSMICG00000016441	CPSF2	100	99.616	Microcebus_murinus
ENSCHIG00000023848	CPSF2	100	98.721	ENSMOCG00000015372	Cpsf2	100	98.721	Microtus_ochrogaster
ENSCHIG00000023848	CPSF2	100	81.115	ENSMMOG00000015590	cpsf2	100	81.115	Mola_mola
ENSCHIG00000023848	CPSF2	100	98.849	ENSMODG00000002042	CPSF2	100	98.849	Monodelphis_domestica
ENSCHIG00000023848	CPSF2	100	82.763	ENSMALG00000022275	cpsf2	100	82.763	Monopterus_albus
ENSCHIG00000023848	CPSF2	100	98.210	ENSMUSG00000041781	Cpsf2	100	98.210	Mus_musculus
ENSCHIG00000023848	CPSF2	100	98.465	MGP_PahariEiJ_G0029791	Cpsf2	100	98.465	Mus_pahari
ENSCHIG00000023848	CPSF2	100	98.210	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	Mus_spretus
ENSCHIG00000023848	CPSF2	100	99.616	ENSMPUG00000007617	CPSF2	98	99.616	Mustela_putorius_furo
ENSCHIG00000023848	CPSF2	100	99.105	ENSMLUG00000005570	CPSF2	100	99.105	Myotis_lucifugus
ENSCHIG00000023848	CPSF2	100	99.233	ENSNGAG00000020312	Cpsf2	100	99.233	Nannospalax_galili
ENSCHIG00000023848	CPSF2	100	85.805	ENSNBRG00000022402	cpsf2	100	85.805	Neolamprologus_brichardi
ENSCHIG00000023848	CPSF2	100	98.721	ENSNLEG00000017132	CPSF2	100	98.721	Nomascus_leucogenys
ENSCHIG00000023848	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSCHIG00000023848	CPSF2	94	91.530	ENSOPRG00000008484	-	100	91.530	Ochotona_princeps
ENSCHIG00000023848	CPSF2	100	99.361	ENSODEG00000008682	CPSF2	100	99.361	Octodon_degus
ENSCHIG00000023848	CPSF2	100	86.185	ENSONIG00000005901	cpsf2	100	86.185	Oreochromis_niloticus
ENSCHIG00000023848	CPSF2	100	98.465	ENSOANG00000003822	CPSF2	100	98.465	Ornithorhynchus_anatinus
ENSCHIG00000023848	CPSF2	100	99.488	ENSOCUG00000005713	CPSF2	100	99.488	Oryctolagus_cuniculus
ENSCHIG00000023848	CPSF2	100	80.101	ENSORLG00000011628	cpsf2	100	80.101	Oryzias_latipes
ENSCHIG00000023848	CPSF2	100	84.918	ENSORLG00020016980	cpsf2	100	84.918	Oryzias_latipes_hni
ENSCHIG00000023848	CPSF2	100	84.918	ENSORLG00015011910	cpsf2	100	84.918	Oryzias_latipes_hsok
ENSCHIG00000023848	CPSF2	100	84.157	ENSOMEG00000022876	cpsf2	100	84.157	Oryzias_melastigma
ENSCHIG00000023848	CPSF2	100	96.939	ENSOARG00000012889	CPSF2	100	96.939	Ovis_aries
ENSCHIG00000023848	CPSF2	100	99.616	ENSPPAG00000039666	CPSF2	100	99.616	Pan_paniscus
ENSCHIG00000023848	CPSF2	99	99.488	ENSPPRG00000010869	CPSF2	100	99.488	Panthera_pardus
ENSCHIG00000023848	CPSF2	100	99.488	ENSPTIG00000021202	CPSF2	100	99.488	Panthera_tigris_altaica
ENSCHIG00000023848	CPSF2	100	99.616	ENSPTRG00000006651	CPSF2	100	99.616	Pan_troglodytes
ENSCHIG00000023848	CPSF2	100	99.744	ENSPANG00000017417	CPSF2	100	99.744	Papio_anubis
ENSCHIG00000023848	CPSF2	100	82.084	ENSPKIG00000021453	cpsf2	100	82.084	Paramormyrops_kingsleyae
ENSCHIG00000023848	CPSF2	100	96.041	ENSPSIG00000006289	CPSF2	100	96.041	Pelodiscus_sinensis
ENSCHIG00000023848	CPSF2	76	79.734	ENSPMGG00000002511	cpsf2	100	79.900	Periophthalmus_magnuspinnatus
ENSCHIG00000023848	CPSF2	100	98.977	ENSPEMG00000007917	Cpsf2	100	98.977	Peromyscus_maniculatus_bairdii
ENSCHIG00000023848	CPSF2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSCHIG00000023848	CPSF2	100	98.849	ENSPCIG00000011393	CPSF2	100	98.849	Phascolarctos_cinereus
ENSCHIG00000023848	CPSF2	100	85.425	ENSPFOG00000018648	cpsf2	100	85.425	Poecilia_formosa
ENSCHIG00000023848	CPSF2	100	85.425	ENSPLAG00000019199	cpsf2	99	85.425	Poecilia_latipinna
ENSCHIG00000023848	CPSF2	96	85.789	ENSPMEG00000012100	cpsf2	100	85.160	Poecilia_mexicana
ENSCHIG00000023848	CPSF2	100	85.298	ENSPREG00000008960	cpsf2	100	85.298	Poecilia_reticulata
ENSCHIG00000023848	CPSF2	63	99.395	ENSPPYG00000029685	-	100	99.395	Pongo_abelii
ENSCHIG00000023848	CPSF2	100	99.361	ENSPCAG00000012477	CPSF2	100	99.361	Procavia_capensis
ENSCHIG00000023848	CPSF2	100	99.616	ENSPCOG00000026387	CPSF2	100	99.616	Propithecus_coquereli
ENSCHIG00000023848	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSCHIG00000023848	CPSF2	100	85.443	ENSPNYG00000023356	cpsf2	100	85.443	Pundamilia_nyererei
ENSCHIG00000023848	CPSF2	100	86.912	ENSPNAG00000001849	cpsf2	100	86.912	Pygocentrus_nattereri
ENSCHIG00000023848	CPSF2	100	98.593	ENSRNOG00000005733	Cpsf2	100	98.593	Rattus_norvegicus
ENSCHIG00000023848	CPSF2	100	99.744	ENSRBIG00000044792	CPSF2	100	99.744	Rhinopithecus_bieti
ENSCHIG00000023848	CPSF2	100	99.744	ENSRROG00000034875	CPSF2	100	99.744	Rhinopithecus_roxellana
ENSCHIG00000023848	CPSF2	100	99.616	ENSSBOG00000024571	CPSF2	100	99.616	Saimiri_boliviensis_boliviensis
ENSCHIG00000023848	CPSF2	100	98.977	ENSSHAG00000010458	CPSF2	100	98.977	Sarcophilus_harrisii
ENSCHIG00000023848	CPSF2	100	87.166	ENSSFOG00015002117	cpsf2	100	87.166	Scleropages_formosus
ENSCHIG00000023848	CPSF2	100	84.157	ENSSMAG00000002001	cpsf2	100	84.157	Scophthalmus_maximus
ENSCHIG00000023848	CPSF2	100	86.312	ENSSDUG00000004084	cpsf2	100	86.312	Seriola_dumerili
ENSCHIG00000023848	CPSF2	100	85.805	ENSSLDG00000024330	cpsf2	100	85.805	Seriola_lalandi_dorsalis
ENSCHIG00000023848	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSCHIG00000023848	CPSF2	100	96.169	ENSSPUG00000013485	CPSF2	100	96.169	Sphenodon_punctatus
ENSCHIG00000023848	CPSF2	100	85.298	ENSSPAG00000013284	cpsf2	100	85.298	Stegastes_partitus
ENSCHIG00000023848	CPSF2	100	99.488	ENSSSCG00000002447	CPSF2	100	99.488	Sus_scrofa
ENSCHIG00000023848	CPSF2	100	96.807	ENSTGUG00000012571	-	100	96.807	Taeniopygia_guttata
ENSCHIG00000023848	CPSF2	100	84.664	ENSTRUG00000003742	cpsf2	100	84.664	Takifugu_rubripes
ENSCHIG00000023848	CPSF2	100	83.565	ENSTNIG00000012228	cpsf2	100	84.324	Tetraodon_nigroviridis
ENSCHIG00000023848	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSCHIG00000023848	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSCHIG00000023848	CPSF2	100	99.744	ENSUAMG00000028071	CPSF2	100	99.744	Ursus_americanus
ENSCHIG00000023848	CPSF2	100	99.744	ENSUMAG00000005029	CPSF2	100	99.744	Ursus_maritimus
ENSCHIG00000023848	CPSF2	99	99.616	ENSVPAG00000003503	CPSF2	100	99.616	Vicugna_pacos
ENSCHIG00000023848	CPSF2	100	99.616	ENSVVUG00000024642	CPSF2	100	99.616	Vulpes_vulpes
ENSCHIG00000023848	CPSF2	100	92.209	ENSXETG00000010289	cpsf2	100	92.209	Xenopus_tropicalis
ENSCHIG00000023848	CPSF2	100	85.805	ENSXCOG00000001764	cpsf2	100	85.805	Xiphophorus_couchianus
ENSCHIG00000023848	CPSF2	100	85.932	ENSXMAG00000017048	cpsf2	100	85.932	Xiphophorus_maculatus