EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000023905 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 22189 bases
Position: chr3:14267712-14289900
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000028368	RRM_1	PF00076.22	4.3e-05	1	1
ENSCHIP00000028361	RRM_1	PF00076.22	5.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000036238	-	660	-	ENSCHIP00000028368	219 (aa)	-	UPI000D18F10A
ENSCHIT00000036231	-	756	-	ENSCHIP00000028361	251 (aa)	-	UPI000D197522

Gene Model

Click here to download ENSCHIG00000023905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023905's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000023905	-	100	58.844	ENSCHIG00000012509	-	98	58.844

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023905	-	100	56.766	ENSG00000084072	PPIE	98	56.766	Homo_sapiens
ENSCHIG00000023905	-	100	51.961	ENSAPOG00000001160	ppie	98	52.614	Acanthochromis_polyacanthus
ENSCHIG00000023905	-	100	51.485	ENSACIG00000022599	ppie	96	52.145	Amphilophus_citrinellus
ENSCHIG00000023905	-	100	51.961	ENSAOCG00000021474	ppie	98	52.614	Amphiprion_ocellaris
ENSCHIG00000023905	-	100	51.961	ENSAPEG00000019253	ppie	98	52.614	Amphiprion_percula
ENSCHIG00000023905	-	100	51.803	ENSATEG00000007395	ppie	98	51.803	Anabas_testudineus
ENSCHIG00000023905	-	100	54.125	ENSACAG00000002688	PPIE	98	54.125	Anolis_carolinensis
ENSCHIG00000023905	-	100	56.811	ENSANAG00000033595	PPIE	98	56.811	Aotus_nancymaae
ENSCHIG00000023905	-	100	50.980	ENSACLG00000019518	ppie	98	51.634	Astatotilapia_calliptera
ENSCHIG00000023905	-	100	51.780	ENSAMXG00000018767	ppie	98	53.333	Astyanax_mexicanus
ENSCHIG00000023905	-	100	58.844	ENSBTAG00000047314	PPIE	98	58.844	Bos_taurus
ENSCHIG00000023905	-	100	55.814	ENSCJAG00000002589	PPIE	98	56.811	Callithrix_jacchus
ENSCHIG00000023905	-	100	56.766	ENSCAFG00000003031	PPIE	98	56.766	Canis_familiaris
ENSCHIG00000023905	-	100	56.766	ENSCAFG00020004132	PPIE	98	56.766	Canis_lupus_dingo
ENSCHIG00000023905	-	100	58.163	ENSTSYG00000000401	PPIE	98	58.163	Carlito_syrichta
ENSCHIG00000023905	-	100	57.143	ENSCPOG00000007365	PPIE	98	57.143	Cavia_porcellus
ENSCHIG00000023905	-	100	57.143	ENSCCAG00000024434	PPIE	98	57.143	Cebus_capucinus
ENSCHIG00000023905	-	100	56.766	ENSCATG00000034495	PPIE	98	56.766	Cercocebus_atys
ENSCHIG00000023905	-	100	53.401	ENSCLAG00000010288	PPIE	98	53.401	Chinchilla_lanigera
ENSCHIG00000023905	-	100	56.863	ENSCSAG00000001131	PPIE	98	56.863	Chlorocebus_sabaeus
ENSCHIG00000023905	-	68	53.571	ENSCHOG00000009018	-	81	53.571	Choloepus_hoffmanni
ENSCHIG00000023905	-	100	57.483	ENSCPBG00000001090	PPIE	98	57.483	Chrysemys_picta_bellii
ENSCHIG00000023905	-	100	56.811	ENSCANG00000029996	PPIE	98	56.811	Colobus_angolensis_palliatus
ENSCHIG00000023905	-	100	56.106	ENSCGRG00001018491	Ppie	98	56.106	Cricetulus_griseus_chok1gshd
ENSCHIG00000023905	-	100	57.823	ENSCGRG00000005685	Ppie	98	57.823	Cricetulus_griseus_crigri
ENSCHIG00000023905	-	99	51.678	ENSCSEG00000000047	ppie	97	52.685	Cynoglossus_semilaevis
ENSCHIG00000023905	-	100	50.820	ENSCVAG00000019238	ppie	98	51.475	Cyprinodon_variegatus
ENSCHIG00000023905	-	100	51.645	ENSDARG00000103234	ppie	89	52.632	Danio_rerio
ENSCHIG00000023905	-	99	56.291	ENSDNOG00000034942	-	97	56.291	Dasypus_novemcinctus
ENSCHIG00000023905	-	99	53.420	ENSDNOG00000002404	-	97	53.420	Dasypus_novemcinctus
ENSCHIG00000023905	-	100	56.436	ENSDORG00000005175	Ppie	98	56.436	Dipodomys_ordii
ENSCHIG00000023905	-	100	58.503	ENSEASG00005014118	-	98	58.503	Equus_asinus_asinus
ENSCHIG00000023905	-	100	56.436	ENSECAG00000031692	-	98	56.436	Equus_caballus
ENSCHIG00000023905	-	100	58.503	ENSECAG00000038706	-	98	58.503	Equus_caballus
ENSCHIG00000023905	-	100	53.535	ENSELUG00000003162	ppie	98	53.535	Esox_lucius
ENSCHIG00000023905	-	100	56.766	ENSFCAG00000006027	-	98	56.766	Felis_catus
ENSCHIG00000023905	-	99	54.485	ENSFALG00000000545	PPIE	91	54.485	Ficedula_albicollis
ENSCHIG00000023905	-	100	55.116	ENSFDAG00000017337	PPIE	98	55.116	Fukomys_damarensis
ENSCHIG00000023905	-	100	51.148	ENSFHEG00000007560	ppie	98	51.803	Fundulus_heteroclitus
ENSCHIG00000023905	-	100	53.872	ENSGMOG00000019015	ppie	98	53.872	Gadus_morhua
ENSCHIG00000023905	-	96	52.381	ENSGALG00000013383	PPIE	89	52.721	Gallus_gallus
ENSCHIG00000023905	-	100	51.148	ENSGAFG00000018146	ppie	98	51.803	Gambusia_affinis
ENSCHIG00000023905	-	100	50.327	ENSGACG00000007165	ppie	98	50.654	Gasterosteus_aculeatus
ENSCHIG00000023905	-	88	61.039	ENSGAGG00000001882	PPIE	92	61.039	Gopherus_agassizii
ENSCHIG00000023905	-	100	56.766	ENSGGOG00000015783	PPIE	98	56.766	Gorilla_gorilla
ENSCHIG00000023905	-	100	50.980	ENSHBUG00000020159	ppie	99	51.815	Haplochromis_burtoni
ENSCHIG00000023905	-	100	55.776	ENSHGLG00000012598	PPIE	98	56.000	Heterocephalus_glaber_female
ENSCHIG00000023905	-	100	55.446	ENSHGLG00100001779	PPIE	98	56.000	Heterocephalus_glaber_male
ENSCHIG00000023905	-	100	52.459	ENSHCOG00000012644	ppie	98	52.459	Hippocampus_comes
ENSCHIG00000023905	-	99	53.135	ENSIPUG00000016601	ppie	97	53.795	Ictalurus_punctatus
ENSCHIG00000023905	-	100	56.106	ENSSTOG00000010445	PPIE	98	56.106	Ictidomys_tridecemlineatus
ENSCHIG00000023905	-	100	56.106	ENSJJAG00000022703	Ppie	98	56.106	Jaculus_jaculus
ENSCHIG00000023905	-	100	51.475	ENSKMAG00000013555	ppie	98	51.475	Kryptolebias_marmoratus
ENSCHIG00000023905	-	100	51.645	ENSLACG00000011207	PPIE	98	52.303	Latimeria_chalumnae
ENSCHIG00000023905	-	100	56.766	ENSLAFG00000028312	-	98	56.766	Loxodonta_africana
ENSCHIG00000023905	-	100	61.818	ENSMFAG00000002082	PPIE	97	61.818	Macaca_fascicularis
ENSCHIG00000023905	-	100	56.766	ENSMMUG00000018869	PPIE	98	56.766	Macaca_mulatta
ENSCHIG00000023905	-	100	57.718	ENSMNEG00000031362	PPIE	98	57.718	Macaca_nemestrina
ENSCHIG00000023905	-	100	57.718	ENSMLEG00000040735	PPIE	98	57.718	Mandrillus_leucophaeus
ENSCHIG00000023905	-	100	50.327	ENSMAMG00000010005	ppie	98	50.327	Mastacembelus_armatus
ENSCHIG00000023905	-	100	50.980	ENSMZEG00005006117	ppie	98	51.634	Maylandia_zebra
ENSCHIG00000023905	-	100	55.116	ENSMOCG00000020138	-	82	55.116	Microtus_ochrogaster
ENSCHIG00000023905	-	100	56.106	ENSMOCG00000018443	-	98	56.106	Microtus_ochrogaster
ENSCHIG00000023905	-	100	51.148	ENSMMOG00000002329	ppie	98	51.803	Mola_mola
ENSCHIG00000023905	-	100	55.116	ENSMODG00000017659	PPIE	98	55.116	Monodelphis_domestica
ENSCHIG00000023905	-	100	51.634	ENSMALG00000011041	ppie	98	51.634	Monopterus_albus
ENSCHIG00000023905	-	100	55.446	MGP_CAROLIEiJ_G0026431	Ppie	98	55.446	Mus_caroli
ENSCHIG00000023905	-	100	55.446	ENSMUSG00000028651	Ppie	98	55.446	Mus_musculus
ENSCHIG00000023905	-	100	55.446	MGP_PahariEiJ_G0028761	Ppie	98	55.446	Mus_pahari
ENSCHIG00000023905	-	100	55.446	MGP_SPRETEiJ_G0027411	Ppie	98	55.446	Mus_spretus
ENSCHIG00000023905	-	100	56.436	ENSMPUG00000014345	PPIE	98	56.436	Mustela_putorius_furo
ENSCHIG00000023905	-	88	60.606	ENSMLUG00000016233	-	97	62.338	Myotis_lucifugus
ENSCHIG00000023905	-	100	55.776	ENSMLUG00000006201	-	98	55.776	Myotis_lucifugus
ENSCHIG00000023905	-	100	56.766	ENSNLEG00000011979	PPIE	98	56.766	Nomascus_leucogenys
ENSCHIG00000023905	-	87	60.262	ENSMEUG00000005090	PPIE	97	60.262	Notamacropus_eugenii
ENSCHIG00000023905	-	69	58.730	ENSOPRG00000015178	-	70	61.376	Ochotona_princeps
ENSCHIG00000023905	-	98	47.687	ENSODEG00000013727	-	72	49.110	Octodon_degus
ENSCHIG00000023905	-	100	55.116	ENSODEG00000007670	-	98	55.116	Octodon_degus
ENSCHIG00000023905	-	100	50.980	ENSONIG00000008165	ppie	98	51.634	Oreochromis_niloticus
ENSCHIG00000023905	-	100	56.291	ENSOANG00000010003	PPIE	98	56.291	Ornithorhynchus_anatinus
ENSCHIG00000023905	-	100	55.776	ENSOCUG00000007665	PPIE	98	55.776	Oryctolagus_cuniculus
ENSCHIG00000023905	-	100	51.623	ENSORLG00015015095	ppie	98	52.117	Oryzias_latipes_hsok
ENSCHIG00000023905	-	100	52.288	ENSOMEG00000014458	ppie	98	52.614	Oryzias_melastigma
ENSCHIG00000023905	-	100	56.536	ENSOGAG00000003620	PPIE	98	56.536	Otolemur_garnettii
ENSCHIG00000023905	-	100	56.863	ENSOARG00000020124	PPIE	98	56.863	Ovis_aries
ENSCHIG00000023905	-	100	56.766	ENSPPAG00000042403	PPIE	98	56.766	Pan_paniscus
ENSCHIG00000023905	-	100	56.766	ENSPPRG00000014232	PPIE	98	56.766	Panthera_pardus
ENSCHIG00000023905	-	100	56.766	ENSPTIG00000003196	PPIE	98	56.766	Panthera_tigris_altaica
ENSCHIG00000023905	-	100	56.766	ENSPTRG00000000577	PPIE	98	56.766	Pan_troglodytes
ENSCHIG00000023905	-	100	56.766	ENSPANG00000000575	PPIE	98	56.766	Papio_anubis
ENSCHIG00000023905	-	99	55.150	ENSPSIG00000016383	PPIE	87	55.150	Pelodiscus_sinensis
ENSCHIG00000023905	-	100	51.140	ENSPMGG00000009082	ppie	98	51.466	Periophthalmus_magnuspinnatus
ENSCHIG00000023905	-	100	55.116	ENSPCIG00000021413	PPIE	98	55.116	Phascolarctos_cinereus
ENSCHIG00000023905	-	100	49.841	ENSPFOG00000002535	ppie	98	50.327	Poecilia_formosa
ENSCHIG00000023905	-	100	50.492	ENSPLAG00000010126	ppie	98	51.148	Poecilia_latipinna
ENSCHIG00000023905	-	100	50.492	ENSPMEG00000019748	ppie	98	51.148	Poecilia_mexicana
ENSCHIG00000023905	-	99	50.329	ENSPREG00000001551	ppie	97	50.987	Poecilia_reticulata
ENSCHIG00000023905	-	100	56.766	ENSPPYG00000001501	PPIE	98	56.766	Pongo_abelii
ENSCHIG00000023905	-	88	62.771	ENSPVAG00000002120	PPIE	93	55.970	Pteropus_vampyrus
ENSCHIG00000023905	-	100	51.485	ENSPNYG00000006336	ppie	98	52.145	Pundamilia_nyererei
ENSCHIG00000023905	-	100	51.974	ENSPNAG00000007122	ppie	98	52.961	Pygocentrus_nattereri
ENSCHIG00000023905	-	99	55.598	ENSRNOG00000014762	Ppie	98	55.446	Rattus_norvegicus
ENSCHIG00000023905	-	100	57.143	ENSRBIG00000041625	PPIE	98	57.143	Rhinopithecus_bieti
ENSCHIG00000023905	-	100	57.143	ENSRROG00000044935	PPIE	98	57.143	Rhinopithecus_roxellana
ENSCHIG00000023905	-	100	57.143	ENSSBOG00000035061	PPIE	98	57.143	Saimiri_boliviensis_boliviensis
ENSCHIG00000023905	-	100	53.795	ENSSHAG00000018113	PPIE	98	53.795	Sarcophilus_harrisii
ENSCHIG00000023905	-	100	51.592	ENSSFOG00015007542	ppie	98	53.443	Scleropages_formosus
ENSCHIG00000023905	-	100	51.634	ENSSMAG00000008993	ppie	98	51.634	Scophthalmus_maximus
ENSCHIG00000023905	-	100	51.634	ENSSDUG00000012593	ppie	98	52.288	Seriola_dumerili
ENSCHIG00000023905	-	100	51.634	ENSSLDG00000013079	ppie	98	52.288	Seriola_lalandi_dorsalis
ENSCHIG00000023905	-	87	62.009	ENSSARG00000005703	PPIE	82	64.629	Sorex_araneus
ENSCHIG00000023905	-	97	55.973	ENSSPUG00000003147	PPIE	100	55.973	Sphenodon_punctatus
ENSCHIG00000023905	-	100	52.614	ENSSPAG00000009232	ppie	98	53.268	Stegastes_partitus
ENSCHIG00000023905	-	99	57.333	ENSSSCG00000003664	-	96	57.191	Sus_scrofa
ENSCHIG00000023905	-	88	51.948	ENSTGUG00000001276	PPIE	97	52.137	Taeniopygia_guttata
ENSCHIG00000023905	-	100	50.987	ENSTRUG00000006308	ppie	98	50.987	Takifugu_rubripes
ENSCHIG00000023905	-	100	50.000	ENSTNIG00000016901	ppie	98	50.654	Tetraodon_nigroviridis
ENSCHIG00000023905	-	88	61.039	ENSTTRG00000014385	PPIE	83	55.970	Tursiops_truncatus
ENSCHIG00000023905	-	100	58.503	ENSUMAG00000017319	PPIE	98	58.503	Ursus_maritimus
ENSCHIG00000023905	-	73	44.690	ENSVPAG00000010049	PPIE	94	44.690	Vicugna_pacos
ENSCHIG00000023905	-	100	55.446	ENSVVUG00000005268	-	90	56.766	Vulpes_vulpes
ENSCHIG00000023905	-	100	52.145	ENSXETG00000010944	ppie	98	52.145	Xenopus_tropicalis
ENSCHIG00000023905	-	100	51.475	ENSXMAG00000019027	ppie	98	52.131	Xiphophorus_maculatus