EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000023999 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1619 bases
Position: chr2:7005376-7006994
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000028502	RRM_1	PF00076.22	6.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000036372	-	210	-	ENSCHIP00000028502	69 (aa)	-	UPI000015D3BC

Gene Model

Click here to download ENSCHIG00000023999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000023999's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000023999	-	100	74.286	ENSCHIG00000011877	-	92	74.286
ENSCHIG00000023999	-	100	73.913	ENSCHIG00000000308	-	83	73.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000023999	-	90	85.484	ENSG00000154548	SRSF12	73	66.667	Homo_sapiens
ENSCHIG00000023999	-	88	86.885	ENSAPOG00000024545	-	95	86.885	Acanthochromis_polyacanthus
ENSCHIG00000023999	-	88	86.885	ENSACIG00000018697	-	90	86.885	Amphilophus_citrinellus
ENSCHIG00000023999	-	87	83.333	ENSACIG00000001537	-	86	83.333	Amphilophus_citrinellus
ENSCHIG00000023999	-	87	81.667	ENSAPEG00000016160	-	85	81.667	Amphiprion_percula
ENSCHIG00000023999	-	100	72.464	ENSATEG00000003493	-	96	72.464	Anabas_testudineus
ENSCHIG00000023999	-	88	78.689	ENSAMXG00000031867	-	88	78.689	Astyanax_mexicanus
ENSCHIG00000023999	-	87	81.667	ENSDARG00000112572	CR293507.1	100	81.667	Danio_rerio
ENSCHIG00000023999	-	81	82.143	ENSFHEG00000000365	-	50	82.143	Fundulus_heteroclitus
ENSCHIG00000023999	-	97	73.134	ENSHCOG00000008417	-	77	73.134	Hippocampus_comes
ENSCHIG00000023999	-	88	83.607	ENSHCOG00000005897	-	90	83.607	Hippocampus_comes
ENSCHIG00000023999	-	87	81.667	ENSIPUG00000023118	-	57	81.667	Ictalurus_punctatus
ENSCHIG00000023999	-	87	81.667	ENSLBEG00000012669	-	91	81.667	Labrus_bergylta
ENSCHIG00000023999	-	81	82.143	ENSMAMG00000008111	-	85	82.143	Mastacembelus_armatus
ENSCHIG00000023999	-	87	83.333	ENSMAMG00000007646	-	67	83.333	Mastacembelus_armatus
ENSCHIG00000023999	-	84	98.276	ENSMAUG00000009812	-	85	98.276	Mesocricetus_auratus
ENSCHIG00000023999	-	87	83.333	ENSMMOG00000013350	-	86	83.333	Mola_mola
ENSCHIG00000023999	-	88	86.885	ENSNBRG00000010616	-	87	86.885	Neolamprologus_brichardi
ENSCHIG00000023999	-	87	90.000	ENSODEG00000000894	-	87	90.000	Octodon_degus
ENSCHIG00000023999	-	83	94.737	ENSODEG00000003118	-	80	94.737	Octodon_degus
ENSCHIG00000023999	-	87	83.333	ENSPKIG00000000613	-	67	83.333	Paramormyrops_kingsleyae
ENSCHIG00000023999	-	84	91.379	ENSPEMG00000021564	-	81	91.379	Peromyscus_maniculatus_bairdii
ENSCHIG00000023999	-	88	80.328	ENSPNAG00000009501	-	92	80.328	Pygocentrus_nattereri
ENSCHIG00000023999	-	90	67.606	ENSSMAG00000018546	-	95	67.606	Scophthalmus_maximus
ENSCHIG00000023999	-	88	85.246	ENSSLDG00000002710	-	98	85.246	Seriola_lalandi_dorsalis
ENSCHIG00000023999	-	83	84.211	ENSSLDG00000000417	-	75	84.211	Seriola_lalandi_dorsalis
ENSCHIG00000023999	-	93	96.970	ENSSPUG00000016216	-	99	96.970	Sphenodon_punctatus
ENSCHIG00000023999	-	87	83.333	ENSSPAG00000001821	-	86	83.333	Stegastes_partitus
ENSCHIG00000023999	-	93	78.125	ENSTRUG00000019904	-	88	78.125	Takifugu_rubripes