EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000024198 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 251 bases
Position: chr10:89842003-89842253
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000028830	LSM	PF01423.22	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000036700	-	231	-	ENSCHIP00000028830	76 (aa)	-	UPI000D18CC69

Gene Model

Click here to download ENSCHIG00000024198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000024198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000024198	-	83	81.690	ENSCHIG00000012864	-	100	81.690
ENSCHIG00000024198	-	95	83.750	ENSCHIG00000010334	-	100	83.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000024198	-	95	83.750	ENSG00000164167	LSM6	100	83.750	Homo_sapiens
ENSCHIG00000024198	-	95	80.000	ENSAPOG00000019832	lsm6	100	80.000	Acanthochromis_polyacanthus
ENSCHIG00000024198	-	95	83.750	ENSAMEG00000016671	LSM6	100	83.750	Ailuropoda_melanoleuca
ENSCHIG00000024198	-	95	80.000	ENSACIG00000016711	lsm6	100	80.000	Amphilophus_citrinellus
ENSCHIG00000024198	-	100	78.571	ENSAOCG00000002110	lsm6	54	78.571	Amphiprion_ocellaris
ENSCHIG00000024198	-	95	80.000	ENSAPEG00000023992	lsm6	100	80.000	Amphiprion_percula
ENSCHIG00000024198	-	95	80.000	ENSATEG00000012610	lsm6	100	80.000	Anabas_testudineus
ENSCHIG00000024198	-	91	84.416	ENSAPLG00000012594	LSM6	99	84.416	Anas_platyrhynchos
ENSCHIG00000024198	-	95	83.750	ENSACAG00000004004	LSM6	100	83.750	Anolis_carolinensis
ENSCHIG00000024198	-	95	83.750	ENSANAG00000030568	-	100	83.750	Aotus_nancymaae
ENSCHIG00000024198	-	95	72.500	ENSANAG00000021839	-	100	72.500	Aotus_nancymaae
ENSCHIG00000024198	-	95	80.000	ENSACLG00000025621	lsm6	100	80.000	Astatotilapia_calliptera
ENSCHIG00000024198	-	100	79.762	ENSAMXG00000038738	lsm6	100	81.250	Astyanax_mexicanus
ENSCHIG00000024198	-	99	81.928	ENSBTAG00000014060	LSM6	100	83.750	Bos_taurus
ENSCHIG00000024198	-	95	78.750	ENSBTAG00000052085	-	100	78.750	Bos_taurus
ENSCHIG00000024198	-	88	66.667	WBGene00003080	lsm-6	97	66.667	Caenorhabditis_elegans
ENSCHIG00000024198	-	95	83.750	ENSCJAG00000002482	LSM6	100	83.750	Callithrix_jacchus
ENSCHIG00000024198	-	95	83.750	ENSCAFG00000007738	LSM6	100	83.750	Canis_familiaris
ENSCHIG00000024198	-	95	83.750	ENSCAFG00020025902	LSM6	100	83.750	Canis_lupus_dingo
ENSCHIG00000024198	-	95	83.750	ENSTSYG00000026972	LSM6	100	83.750	Carlito_syrichta
ENSCHIG00000024198	-	88	69.333	ENSTSYG00000012759	-	89	69.333	Carlito_syrichta
ENSCHIG00000024198	-	75	78.462	ENSCAPG00000011179	-	100	78.462	Cavia_aperea
ENSCHIG00000024198	-	95	83.750	ENSCAPG00000008104	LSM6	100	83.750	Cavia_aperea
ENSCHIG00000024198	-	95	83.750	ENSCPOG00000032655	LSM6	100	83.750	Cavia_porcellus
ENSCHIG00000024198	-	95	83.750	ENSCCAG00000036437	LSM6	100	83.750	Cebus_capucinus
ENSCHIG00000024198	-	93	82.278	ENSCCAG00000020665	-	99	82.278	Cebus_capucinus
ENSCHIG00000024198	-	95	65.789	ENSCATG00000038799	-	100	65.789	Cercocebus_atys
ENSCHIG00000024198	-	95	83.750	ENSCATG00000002770	-	100	83.750	Cercocebus_atys
ENSCHIG00000024198	-	95	83.750	ENSCLAG00000005495	LSM6	100	83.750	Chinchilla_lanigera
ENSCHIG00000024198	-	83	61.972	ENSCLAG00000005685	-	100	61.972	Chinchilla_lanigera
ENSCHIG00000024198	-	95	83.750	ENSCSAG00000003421	LSM6	100	83.750	Chlorocebus_sabaeus
ENSCHIG00000024198	-	95	63.750	ENSCHOG00000003420	LSM6	100	63.750	Choloepus_hoffmanni
ENSCHIG00000024198	-	97	81.707	ENSCPBG00000027472	LSM6	86	81.707	Chrysemys_picta_bellii
ENSCHIG00000024198	-	89	80.263	ENSCING00000019152	-	93	80.263	Ciona_intestinalis
ENSCHIG00000024198	-	89	81.579	ENSCSAVG00000002065	-	93	81.579	Ciona_savignyi
ENSCHIG00000024198	-	95	83.750	ENSCANG00000006849	-	100	83.750	Colobus_angolensis_palliatus
ENSCHIG00000024198	-	95	64.474	ENSCANG00000035214	-	100	64.474	Colobus_angolensis_palliatus
ENSCHIG00000024198	-	95	83.750	ENSCANG00000041263	-	100	83.750	Colobus_angolensis_palliatus
ENSCHIG00000024198	-	95	83.750	ENSCGRG00001017142	Lsm6	100	83.750	Cricetulus_griseus_chok1gshd
ENSCHIG00000024198	-	95	83.750	ENSCGRG00000008320	Lsm6	100	83.750	Cricetulus_griseus_crigri
ENSCHIG00000024198	-	100	77.381	ENSCSEG00000000423	lsm6	100	80.000	Cynoglossus_semilaevis
ENSCHIG00000024198	-	95	80.000	ENSCVAG00000001592	lsm6	100	80.000	Cyprinodon_variegatus
ENSCHIG00000024198	-	95	81.250	ENSDARG00000036995	lsm6	100	81.250	Danio_rerio
ENSCHIG00000024198	-	92	73.750	ENSDNOG00000040186	-	86	73.750	Dasypus_novemcinctus
ENSCHIG00000024198	-	95	82.500	ENSDNOG00000044848	-	100	82.500	Dasypus_novemcinctus
ENSCHIG00000024198	-	95	83.750	ENSDORG00000000933	Lsm6	100	83.750	Dipodomys_ordii
ENSCHIG00000024198	-	91	71.429	FBgn0034564	CG9344	97	71.429	Drosophila_melanogaster
ENSCHIG00000024198	-	95	82.500	ENSEBUG00000017073	lsm6	100	82.500	Eptatretus_burgeri
ENSCHIG00000024198	-	80	81.159	ENSEASG00005001533	LSM6	72	81.159	Equus_asinus_asinus
ENSCHIG00000024198	-	95	83.750	ENSECAG00000021036	LSM6	100	83.750	Equus_caballus
ENSCHIG00000024198	-	93	59.494	ENSEEUG00000002101	LSM6	100	59.494	Erinaceus_europaeus
ENSCHIG00000024198	-	95	81.250	ENSELUG00000014301	LSM6	100	81.250	Esox_lucius
ENSCHIG00000024198	-	95	83.750	ENSFCAG00000003047	LSM6	100	83.750	Felis_catus
ENSCHIG00000024198	-	97	82.927	ENSFALG00000005509	LSM6	94	82.927	Ficedula_albicollis
ENSCHIG00000024198	-	95	73.750	ENSFDAG00000019073	-	100	73.750	Fukomys_damarensis
ENSCHIG00000024198	-	95	83.750	ENSFDAG00000020913	-	100	83.750	Fukomys_damarensis
ENSCHIG00000024198	-	95	80.000	ENSFHEG00000007948	lsm6	100	80.000	Fundulus_heteroclitus
ENSCHIG00000024198	-	95	80.000	ENSGMOG00000015550	lsm6	100	80.000	Gadus_morhua
ENSCHIG00000024198	-	95	83.750	ENSGALG00000009985	LSM6	100	83.750	Gallus_gallus
ENSCHIG00000024198	-	95	80.000	ENSGAFG00000017763	lsm6	100	80.000	Gambusia_affinis
ENSCHIG00000024198	-	93	81.013	ENSGACG00000017223	lsm6	99	81.013	Gasterosteus_aculeatus
ENSCHIG00000024198	-	95	83.750	ENSGAGG00000020980	LSM6	100	83.750	Gopherus_agassizii
ENSCHIG00000024198	-	95	83.750	ENSGGOG00000001310	LSM6	100	83.750	Gorilla_gorilla
ENSCHIG00000024198	-	95	80.000	ENSHBUG00000008618	lsm6	100	80.000	Haplochromis_burtoni
ENSCHIG00000024198	-	95	83.750	ENSHGLG00000000205	LSM6	100	83.750	Heterocephalus_glaber_female
ENSCHIG00000024198	-	95	83.750	ENSHGLG00100014341	LSM6	100	83.750	Heterocephalus_glaber_male
ENSCHIG00000024198	-	95	80.000	ENSHCOG00000005591	lsm6	100	80.000	Hippocampus_comes
ENSCHIG00000024198	-	95	80.000	ENSIPUG00000004508	lsm6	100	80.000	Ictalurus_punctatus
ENSCHIG00000024198	-	95	83.750	ENSSTOG00000002678	LSM6	100	83.750	Ictidomys_tridecemlineatus
ENSCHIG00000024198	-	95	83.750	ENSJJAG00000013845	-	100	83.750	Jaculus_jaculus
ENSCHIG00000024198	-	91	66.216	ENSJJAG00000016942	-	97	66.216	Jaculus_jaculus
ENSCHIG00000024198	-	92	76.923	ENSJJAG00000011211	-	98	76.923	Jaculus_jaculus
ENSCHIG00000024198	-	95	80.000	ENSKMAG00000004105	lsm6	100	80.000	Kryptolebias_marmoratus
ENSCHIG00000024198	-	95	80.000	ENSLBEG00000018441	lsm6	100	80.000	Labrus_bergylta
ENSCHIG00000024198	-	95	83.750	ENSLACG00000006937	LSM6	100	83.750	Latimeria_chalumnae
ENSCHIG00000024198	-	95	81.250	ENSLOCG00000008852	lsm6	100	81.250	Lepisosteus_oculatus
ENSCHIG00000024198	-	95	80.000	ENSLOCG00000017683	-	100	80.000	Lepisosteus_oculatus
ENSCHIG00000024198	-	95	83.750	ENSLAFG00000001952	LSM6	100	83.750	Loxodonta_africana
ENSCHIG00000024198	-	95	83.750	ENSMFAG00000033073	LSM6	100	83.750	Macaca_fascicularis
ENSCHIG00000024198	-	95	67.105	ENSMNEG00000040412	-	100	67.105	Macaca_nemestrina
ENSCHIG00000024198	-	95	83.750	ENSMNEG00000034820	-	100	83.750	Macaca_nemestrina
ENSCHIG00000024198	-	95	83.750	ENSMLEG00000035153	LSM6	100	83.750	Mandrillus_leucophaeus
ENSCHIG00000024198	-	95	80.000	ENSMAMG00000014029	lsm6	100	80.000	Mastacembelus_armatus
ENSCHIG00000024198	-	95	80.000	ENSMZEG00005009146	lsm6	100	80.000	Maylandia_zebra
ENSCHIG00000024198	-	95	83.750	ENSMGAG00000003802	LSM6	100	83.750	Meleagris_gallopavo
ENSCHIG00000024198	-	95	83.750	ENSMAUG00000014938	Lsm6	100	83.750	Mesocricetus_auratus
ENSCHIG00000024198	-	92	74.359	ENSMICG00000047411	-	92	74.359	Microcebus_murinus
ENSCHIG00000024198	-	95	83.750	ENSMICG00000042599	LSM6	100	83.750	Microcebus_murinus
ENSCHIG00000024198	-	95	83.750	ENSMOCG00000020049	Lsm6	100	83.750	Microtus_ochrogaster
ENSCHIG00000024198	-	95	80.000	ENSMMOG00000005470	lsm6	100	80.000	Mola_mola
ENSCHIG00000024198	-	95	75.000	ENSMMOG00000007379	-	100	75.000	Mola_mola
ENSCHIG00000024198	-	95	83.750	ENSMODG00000000526	LSM6	100	83.750	Monodelphis_domestica
ENSCHIG00000024198	-	95	80.000	ENSMALG00000002419	lsm6	100	80.000	Monopterus_albus
ENSCHIG00000024198	-	95	83.750	MGP_CAROLIEiJ_G0031245	Lsm6	100	83.750	Mus_caroli
ENSCHIG00000024198	-	95	83.750	ENSMUSG00000031683	Lsm6	100	83.750	Mus_musculus
ENSCHIG00000024198	-	95	83.750	MGP_PahariEiJ_G0022851	Lsm6	100	83.750	Mus_pahari
ENSCHIG00000024198	-	95	83.750	MGP_SPRETEiJ_G0032365	Lsm6	100	83.750	Mus_spretus
ENSCHIG00000024198	-	97	84.146	ENSMPUG00000006936	LSM6	95	84.146	Mustela_putorius_furo
ENSCHIG00000024198	-	95	83.750	ENSMLUG00000026355	LSM6	100	83.750	Myotis_lucifugus
ENSCHIG00000024198	-	95	83.750	ENSNGAG00000019116	Lsm6	100	83.750	Nannospalax_galili
ENSCHIG00000024198	-	95	80.000	ENSNBRG00000004887	lsm6	100	80.000	Neolamprologus_brichardi
ENSCHIG00000024198	-	95	83.750	ENSNLEG00000005584	LSM6	100	83.750	Nomascus_leucogenys
ENSCHIG00000024198	-	95	82.500	ENSOPRG00000011199	LSM6	100	82.500	Ochotona_princeps
ENSCHIG00000024198	-	91	72.727	ENSODEG00000018684	-	100	72.727	Octodon_degus
ENSCHIG00000024198	-	95	81.250	ENSODEG00000020420	-	100	81.250	Octodon_degus
ENSCHIG00000024198	-	95	80.000	ENSODEG00000019419	-	100	80.000	Octodon_degus
ENSCHIG00000024198	-	95	82.500	ENSODEG00000002307	-	100	82.500	Octodon_degus
ENSCHIG00000024198	-	95	80.000	ENSONIG00000010005	lsm6	100	80.000	Oreochromis_niloticus
ENSCHIG00000024198	-	92	61.538	ENSOANG00000006895	-	100	61.538	Ornithorhynchus_anatinus
ENSCHIG00000024198	-	92	61.538	ENSOANG00000006894	-	100	61.538	Ornithorhynchus_anatinus
ENSCHIG00000024198	-	95	78.750	ENSORLG00000024158	lsm6	100	78.750	Oryzias_latipes
ENSCHIG00000024198	-	95	78.750	ENSORLG00020017383	lsm6	100	78.750	Oryzias_latipes_hni
ENSCHIG00000024198	-	95	78.750	ENSORLG00015016903	lsm6	100	78.750	Oryzias_latipes_hsok
ENSCHIG00000024198	-	95	80.000	ENSOMEG00000000074	lsm6	100	80.000	Oryzias_melastigma
ENSCHIG00000024198	-	95	83.750	ENSOGAG00000033153	-	100	83.750	Otolemur_garnettii
ENSCHIG00000024198	-	95	83.750	ENSOGAG00000026665	-	100	83.750	Otolemur_garnettii
ENSCHIG00000024198	-	80	81.159	ENSOARG00000008509	-	88	81.159	Ovis_aries
ENSCHIG00000024198	-	99	85.542	ENSOARG00000011641	-	97	85.542	Ovis_aries
ENSCHIG00000024198	-	95	83.750	ENSPPAG00000037929	LSM6	100	83.750	Pan_paniscus
ENSCHIG00000024198	-	95	83.750	ENSPPRG00000012806	LSM6	100	83.750	Panthera_pardus
ENSCHIG00000024198	-	95	83.750	ENSPTIG00000019769	LSM6	100	83.750	Panthera_tigris_altaica
ENSCHIG00000024198	-	95	83.750	ENSPTRG00000016488	LSM6	100	83.750	Pan_troglodytes
ENSCHIG00000024198	-	95	83.750	ENSPANG00000006552	LSM6	100	83.750	Papio_anubis
ENSCHIG00000024198	-	95	81.250	ENSPKIG00000016176	lsm6	100	81.250	Paramormyrops_kingsleyae
ENSCHIG00000024198	-	95	83.750	ENSPSIG00000016942	LSM6	100	83.750	Pelodiscus_sinensis
ENSCHIG00000024198	-	95	80.000	ENSPMGG00000018004	lsm6	100	80.000	Periophthalmus_magnuspinnatus
ENSCHIG00000024198	-	95	83.750	ENSPEMG00000012410	Lsm6	100	83.750	Peromyscus_maniculatus_bairdii
ENSCHIG00000024198	-	95	82.500	ENSPMAG00000006949	lsm6	100	82.500	Petromyzon_marinus
ENSCHIG00000024198	-	99	81.928	ENSPCIG00000023469	LSM6	80	81.159	Phascolarctos_cinereus
ENSCHIG00000024198	-	95	80.000	ENSPFOG00000008881	lsm6	100	80.000	Poecilia_formosa
ENSCHIG00000024198	-	95	80.000	ENSPLAG00000003202	lsm6	100	80.000	Poecilia_latipinna
ENSCHIG00000024198	-	95	80.000	ENSPMEG00000004000	lsm6	100	80.000	Poecilia_mexicana
ENSCHIG00000024198	-	95	80.000	ENSPREG00000023235	lsm6	100	80.000	Poecilia_reticulata
ENSCHIG00000024198	-	95	83.750	ENSPPYG00000015105	LSM6	100	83.750	Pongo_abelii
ENSCHIG00000024198	-	95	83.750	ENSPCOG00000013899	LSM6	100	83.750	Propithecus_coquereli
ENSCHIG00000024198	-	95	80.000	ENSPNYG00000012614	lsm6	100	80.000	Pundamilia_nyererei
ENSCHIG00000024198	-	95	81.250	ENSPNAG00000018779	lsm6	100	81.250	Pygocentrus_nattereri
ENSCHIG00000024198	-	95	83.750	ENSRNOG00000049370	LOC100360750	100	83.750	Rattus_norvegicus
ENSCHIG00000024198	-	95	83.750	ENSRNOG00000030374	Lsm6	100	83.750	Rattus_norvegicus
ENSCHIG00000024198	-	95	83.750	ENSRBIG00000027878	LSM6	100	83.750	Rhinopithecus_bieti
ENSCHIG00000024198	-	95	83.750	ENSRROG00000024868	LSM6	100	83.750	Rhinopithecus_roxellana
ENSCHIG00000024198	-	92	37.805	YDR378C	-	99	40.000	Saccharomyces_cerevisiae
ENSCHIG00000024198	-	95	83.750	ENSSBOG00000021229	-	100	83.750	Saimiri_boliviensis_boliviensis
ENSCHIG00000024198	-	95	66.667	ENSSBOG00000028103	-	100	66.667	Saimiri_boliviensis_boliviensis
ENSCHIG00000024198	-	95	81.250	ENSSFOG00015016480	lsm6	100	81.250	Scleropages_formosus
ENSCHIG00000024198	-	95	80.000	ENSSMAG00000004550	lsm6	100	80.000	Scophthalmus_maximus
ENSCHIG00000024198	-	100	78.571	ENSSDUG00000020459	lsm6	52	78.571	Seriola_dumerili
ENSCHIG00000024198	-	80	79.710	ENSSLDG00000004136	-	59	79.710	Seriola_lalandi_dorsalis
ENSCHIG00000024198	-	100	78.571	ENSSLDG00000020533	lsm6	88	78.571	Seriola_lalandi_dorsalis
ENSCHIG00000024198	-	95	83.750	ENSSPUG00000008657	LSM6	100	83.750	Sphenodon_punctatus
ENSCHIG00000024198	-	95	80.000	ENSSPAG00000003246	lsm6	100	80.000	Stegastes_partitus
ENSCHIG00000024198	-	95	83.750	ENSSSCG00000035973	LSM6	100	83.750	Sus_scrofa
ENSCHIG00000024198	-	95	83.750	ENSTGUG00000002663	LSM6	100	83.750	Taeniopygia_guttata
ENSCHIG00000024198	-	95	80.000	ENSTRUG00000023398	lsm6	100	80.000	Takifugu_rubripes
ENSCHIG00000024198	-	95	80.000	ENSTNIG00000017725	lsm6	100	80.000	Tetraodon_nigroviridis
ENSCHIG00000024198	-	95	83.750	ENSTTRG00000004609	LSM6	100	83.750	Tursiops_truncatus
ENSCHIG00000024198	-	92	74.359	ENSUAMG00000014213	LSM6	64	74.359	Ursus_americanus
ENSCHIG00000024198	-	92	74.359	ENSUMAG00000015727	LSM6	64	74.359	Ursus_maritimus
ENSCHIG00000024198	-	95	83.750	ENSVPAG00000006922	LSM6	100	83.750	Vicugna_pacos
ENSCHIG00000024198	-	99	84.337	ENSVVUG00000009254	LSM6	71	84.337	Vulpes_vulpes
ENSCHIG00000024198	-	95	83.750	ENSXETG00000023683	lsm6	100	83.750	Xenopus_tropicalis
ENSCHIG00000024198	-	95	80.000	ENSXMAG00000009606	lsm6	100	80.000	Xiphophorus_maculatus