EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000024202 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 21001 bases
Position: chr18:65099231-65120231
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000028838	zf-C2H2	PF00096.26	5.9e-24	1	4
ENSCHIP00000028838	zf-C2H2	PF00096.26	5.9e-24	2	4
ENSCHIP00000028838	zf-C2H2	PF00096.26	5.9e-24	3	4
ENSCHIP00000028838	zf-C2H2	PF00096.26	5.9e-24	4	4
ENSCHIP00000028838	zf-met	PF12874.7	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000036708	-	1893	-	ENSCHIP00000028838	461 (aa)	-	UPI000D193232

Gene Model

Click here to download ENSCHIG00000024202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000024202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000024202	-	50	42.593	ENSCHIG00000012252	ZNF865	75	39.850
ENSCHIG00000024202	-	59	41.398	ENSCHIG00000026799	ZNF202	57	43.949
ENSCHIG00000024202	-	100	99.132	ENSCHIG00000014993	-	100	99.132
ENSCHIG00000024202	-	70	51.429	ENSCHIG00000020931	-	94	51.429
ENSCHIG00000024202	-	83	75.328	ENSCHIG00000015589	-	100	75.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000024202	-	97	45.833	ENSDNOG00000010100	-	98	45.306	Dasypus_novemcinctus
ENSCHIG00000024202	-	100	50.200	ENSEASG00005020480	-	99	50.200	Equus_asinus_asinus
ENSCHIG00000024202	-	100	50.097	ENSECAG00000006782	-	99	50.097	Equus_caballus
ENSCHIG00000024202	-	95	49.153	ENSFCAG00000041174	-	99	49.153	Felis_catus
ENSCHIG00000024202	-	94	38.479	ENSMAUG00000015051	Zscan5b	95	38.479	Mesocricetus_auratus
ENSCHIG00000024202	-	99	45.528	ENSMPUG00000006686	-	98	45.528	Mustela_putorius_furo
ENSCHIG00000024202	-	92	42.683	ENSMLUG00000006448	-	94	42.683	Myotis_lucifugus
ENSCHIG00000024202	-	91	45.455	ENSMLUG00000024124	-	91	43.297	Myotis_lucifugus
ENSCHIG00000024202	-	92	44.318	ENSMLUG00000029894	-	99	44.318	Myotis_lucifugus
ENSCHIG00000024202	-	100	42.000	ENSOGAG00000011347	-	99	42.000	Otolemur_garnettii
ENSCHIG00000024202	-	99	40.693	ENSOGAG00000026429	-	99	41.031	Otolemur_garnettii
ENSCHIG00000024202	-	92	50.664	ENSPTIG00000015051	-	94	50.664	Panthera_tigris_altaica
ENSCHIG00000024202	-	92	48.018	ENSPVAG00000017654	-	93	48.018	Pteropus_vampyrus
ENSCHIG00000024202	-	56	57.706	ENSVPAG00000002606	-	98	57.706	Vicugna_pacos