EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000024245 (Gene tree)
Gene ID: 102189255
Gene Symbol: GPATCH3
Alias: FLJ12455|GPATC3
Full Name: G-patch domain containing 3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 6763 bases
Position: chr2:9651793-9658555
Accession: 102189255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000028907	G-patch	PF01585.23	4.9e-07	1	1
ENSCHIP00000028912	G-patch	PF01585.23	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000036782	GPATCH3-202	1596	XM_005676800	ENSCHIP00000028912	531 (aa)	XP_005676857	UPI0008464958
ENSCHIT00000036777	GPATCH3-201	1581	-	ENSCHIP00000028907	526 (aa)	-	UPI000D19283B

Gene Model

Click here to download ENSCHIG00000024245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000024245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000024245	GPATCH3	98	83.810	ENSG00000198746	GPATCH3	100	89.062	Homo_sapiens
ENSCHIG00000024245	GPATCH3	94	54.224	ENSAPOG00000001212	gpatch3	97	55.796	Acanthochromis_polyacanthus
ENSCHIG00000024245	GPATCH3	98	88.247	ENSAMEG00000010801	GPATCH3	100	88.054	Ailuropoda_melanoleuca
ENSCHIG00000024245	GPATCH3	94	56.751	ENSAOCG00000019352	gpatch3	97	56.556	Amphiprion_ocellaris
ENSCHIG00000024245	GPATCH3	94	56.164	ENSAPEG00000018926	gpatch3	97	56.360	Amphiprion_percula
ENSCHIG00000024245	GPATCH3	94	54.941	ENSATEG00000023759	gpatch3	97	53.953	Anabas_testudineus
ENSCHIG00000024245	GPATCH3	64	71.429	ENSAPLG00000010745	GPATCH3	99	71.429	Anas_platyrhynchos
ENSCHIG00000024245	GPATCH3	93	58.108	ENSACAG00000016709	GPATCH3	95	58.108	Anolis_carolinensis
ENSCHIG00000024245	GPATCH3	97	84.302	ENSANAG00000035944	GPATCH3	100	84.302	Aotus_nancymaae
ENSCHIG00000024245	GPATCH3	94	54.134	ENSACLG00000012807	gpatch3	97	54.134	Astatotilapia_calliptera
ENSCHIG00000024245	GPATCH3	92	54.508	ENSAMXG00000034582	gpatch3	95	54.508	Astyanax_mexicanus
ENSCHIG00000024245	GPATCH3	98	96.525	ENSBTAG00000014849	GPATCH3	100	96.525	Bos_taurus
ENSCHIG00000024245	GPATCH3	94	35.768	WBGene00019467	K07B1.7	95	35.539	Caenorhabditis_elegans
ENSCHIG00000024245	GPATCH3	98	82.386	ENSCJAG00000010000	GPATCH3	99	82.386	Callithrix_jacchus
ENSCHIG00000024245	GPATCH3	98	88.825	ENSCAFG00000012265	GPATCH3	100	88.825	Canis_familiaris
ENSCHIG00000024245	GPATCH3	98	88.825	ENSCAFG00020021640	GPATCH3	100	88.825	Canis_lupus_dingo
ENSCHIG00000024245	GPATCH3	98	84.571	ENSTSYG00000011753	GPATCH3	100	84.952	Carlito_syrichta
ENSCHIG00000024245	GPATCH3	61	82.919	ENSCAPG00000007313	GPATCH3	100	81.437	Cavia_aperea
ENSCHIG00000024245	GPATCH3	96	83.529	ENSCPOG00000010404	GPATCH3	100	82.409	Cavia_porcellus
ENSCHIG00000024245	GPATCH3	97	84.078	ENSCCAG00000030482	GPATCH3	100	84.302	Cebus_capucinus
ENSCHIG00000024245	GPATCH3	98	81.524	ENSCATG00000033598	GPATCH3	100	81.524	Cercocebus_atys
ENSCHIG00000024245	GPATCH3	96	83.399	ENSCLAG00000012064	GPATCH3	100	83.205	Chinchilla_lanigera
ENSCHIG00000024245	GPATCH3	94	65.139	ENSCPBG00000024968	GPATCH3	96	65.139	Chrysemys_picta_bellii
ENSCHIG00000024245	GPATCH3	98	83.429	ENSCANG00000036795	GPATCH3	100	83.429	Colobus_angolensis_palliatus
ENSCHIG00000024245	GPATCH3	98	80.769	ENSCGRG00001002930	Gpatch3	100	80.769	Cricetulus_griseus_chok1gshd
ENSCHIG00000024245	GPATCH3	98	80.769	ENSCGRG00000004699	Gpatch3	100	80.769	Cricetulus_griseus_crigri
ENSCHIG00000024245	GPATCH3	92	55.336	ENSCSEG00000005277	gpatch3	96	55.929	Cynoglossus_semilaevis
ENSCHIG00000024245	GPATCH3	94	55.769	ENSCVAG00000000827	gpatch3	97	55.577	Cyprinodon_variegatus
ENSCHIG00000024245	GPATCH3	90	68.056	ENSDARG00000052747	gpatch3	68	68.056	Danio_rerio
ENSCHIG00000024245	GPATCH3	98	83.556	ENSDNOG00000016999	GPATCH3	100	83.556	Dasypus_novemcinctus
ENSCHIG00000024245	GPATCH3	94	44.981	ENSEBUG00000013911	gpatch3	91	44.422	Eptatretus_burgeri
ENSCHIG00000024245	GPATCH3	98	87.500	ENSEASG00005008636	GPATCH3	100	87.500	Equus_asinus_asinus
ENSCHIG00000024245	GPATCH3	98	87.692	ENSECAG00000007653	GPATCH3	100	87.692	Equus_caballus
ENSCHIG00000024245	GPATCH3	94	55.357	ENSELUG00000000963	gpatch3	97	55.842	Esox_lucius
ENSCHIG00000024245	GPATCH3	98	86.538	ENSFCAG00000012819	GPATCH3	100	86.538	Felis_catus
ENSCHIG00000024245	GPATCH3	66	70.893	ENSFALG00000000319	GPATCH3	96	70.893	Ficedula_albicollis
ENSCHIG00000024245	GPATCH3	98	81.644	ENSFDAG00000016270	GPATCH3	100	81.644	Fukomys_damarensis
ENSCHIG00000024245	GPATCH3	94	54.721	ENSFHEG00000015264	gpatch3	97	55.706	Fundulus_heteroclitus
ENSCHIG00000024245	GPATCH3	93	55.248	ENSGMOG00000000991	gpatch3	97	55.248	Gadus_morhua
ENSCHIG00000024245	GPATCH3	96	62.549	ENSGALG00000000881	GPATCH3	96	62.549	Gallus_gallus
ENSCHIG00000024245	GPATCH3	93	57.030	ENSGAFG00000002531	gpatch3	98	59.777	Gambusia_affinis
ENSCHIG00000024245	GPATCH3	94	53.816	ENSGACG00000007199	gpatch3	97	54.599	Gasterosteus_aculeatus
ENSCHIG00000024245	GPATCH3	95	64.961	ENSGAGG00000023286	GPATCH3	97	64.961	Gopherus_agassizii
ENSCHIG00000024245	GPATCH3	98	84.000	ENSGGOG00000015305	GPATCH3	100	84.000	Gorilla_gorilla
ENSCHIG00000024245	GPATCH3	94	54.134	ENSHBUG00000020513	gpatch3	94	61.449	Haplochromis_burtoni
ENSCHIG00000024245	GPATCH3	98	81.836	ENSHGLG00000012492	GPATCH3	100	81.836	Heterocephalus_glaber_female
ENSCHIG00000024245	GPATCH3	98	81.836	ENSHGLG00100016909	GPATCH3	100	81.836	Heterocephalus_glaber_male
ENSCHIG00000024245	GPATCH3	92	57.058	ENSHCOG00000005739	gpatch3	96	56.660	Hippocampus_comes
ENSCHIG00000024245	GPATCH3	94	52.199	ENSIPUG00000007697	gpatch3	99	62.821	Ictalurus_punctatus
ENSCHIG00000024245	GPATCH3	98	84.351	ENSSTOG00000015220	GPATCH3	100	84.351	Ictidomys_tridecemlineatus
ENSCHIG00000024245	GPATCH3	98	81.369	ENSJJAG00000003292	Gpatch3	100	81.369	Jaculus_jaculus
ENSCHIG00000024245	GPATCH3	94	55.449	ENSKMAG00000020717	gpatch3	98	55.212	Kryptolebias_marmoratus
ENSCHIG00000024245	GPATCH3	94	52.031	ENSLBEG00000007046	gpatch3	95	53.229	Labrus_bergylta
ENSCHIG00000024245	GPATCH3	89	72.197	ENSLACG00000011400	GPATCH3	78	72.197	Latimeria_chalumnae
ENSCHIG00000024245	GPATCH3	93	56.400	ENSLOCG00000003858	gpatch3	97	56.400	Lepisosteus_oculatus
ENSCHIG00000024245	GPATCH3	98	83.588	ENSLAFG00000016691	GPATCH3	100	83.588	Loxodonta_africana
ENSCHIG00000024245	GPATCH3	98	84.571	ENSMFAG00000030918	GPATCH3	100	84.571	Macaca_fascicularis
ENSCHIG00000024245	GPATCH3	98	84.571	ENSMMUG00000018723	GPATCH3	100	84.571	Macaca_mulatta
ENSCHIG00000024245	GPATCH3	85	74.066	ENSMNEG00000033889	GPATCH3	94	74.066	Macaca_nemestrina
ENSCHIG00000024245	GPATCH3	98	84.762	ENSMLEG00000033364	GPATCH3	100	84.762	Mandrillus_leucophaeus
ENSCHIG00000024245	GPATCH3	94	55.906	ENSMAMG00000023975	gpatch3	97	55.906	Mastacembelus_armatus
ENSCHIG00000024245	GPATCH3	94	54.134	ENSMZEG00005019731	gpatch3	97	54.134	Maylandia_zebra
ENSCHIG00000024245	GPATCH3	68	67.956	ENSMGAG00000000813	GPATCH3	99	67.956	Meleagris_gallopavo
ENSCHIG00000024245	GPATCH3	98	79.356	ENSMAUG00000002005	Gpatch3	100	81.061	Mesocricetus_auratus
ENSCHIG00000024245	GPATCH3	98	86.667	ENSMICG00000015656	GPATCH3	100	86.667	Microcebus_murinus
ENSCHIG00000024245	GPATCH3	98	78.095	ENSMOCG00000022375	Gpatch3	100	79.619	Microtus_ochrogaster
ENSCHIG00000024245	GPATCH3	62	63.830	ENSMMOG00000008963	gpatch3	93	63.830	Mola_mola
ENSCHIG00000024245	GPATCH3	98	74.254	ENSMODG00000014417	GPATCH3	100	74.254	Monodelphis_domestica
ENSCHIG00000024245	GPATCH3	94	53.452	ENSMALG00000007586	gpatch3	97	54.043	Monopterus_albus
ENSCHIG00000024245	GPATCH3	98	82.286	MGP_CAROLIEiJ_G0026594	Gpatch3	100	82.095	Mus_caroli
ENSCHIG00000024245	GPATCH3	98	80.418	ENSMUSG00000028850	Gpatch3	100	81.179	Mus_musculus
ENSCHIG00000024245	GPATCH3	98	80.806	MGP_PahariEiJ_G0028927	Gpatch3	100	81.958	Mus_pahari
ENSCHIG00000024245	GPATCH3	98	80.952	MGP_SPRETEiJ_G0027575	Gpatch3	99	86.567	Mus_spretus
ENSCHIG00000024245	GPATCH3	98	88.247	ENSMPUG00000015665	GPATCH3	100	88.247	Mustela_putorius_furo
ENSCHIG00000024245	GPATCH3	98	85.385	ENSMLUG00000023528	GPATCH3	100	85.962	Myotis_lucifugus
ENSCHIG00000024245	GPATCH3	98	80.497	ENSNGAG00000006821	Gpatch3	100	80.497	Nannospalax_galili
ENSCHIG00000024245	GPATCH3	94	51.717	ENSNBRG00000000365	gpatch3	97	51.710	Neolamprologus_brichardi
ENSCHIG00000024245	GPATCH3	98	80.577	ENSNLEG00000009387	GPATCH3	99	81.154	Nomascus_leucogenys
ENSCHIG00000024245	GPATCH3	98	75.895	ENSMEUG00000003236	GPATCH3	100	75.895	Notamacropus_eugenii
ENSCHIG00000024245	GPATCH3	98	83.430	ENSOPRG00000016429	GPATCH3	100	83.815	Ochotona_princeps
ENSCHIG00000024245	GPATCH3	98	84.200	ENSODEG00000003292	GPATCH3	100	84.200	Octodon_degus
ENSCHIG00000024245	GPATCH3	94	55.865	ENSONIG00000006771	gpatch3	97	55.268	Oreochromis_niloticus
ENSCHIG00000024245	GPATCH3	87	78.834	ENSOCUG00000006411	GPATCH3	100	78.737	Oryctolagus_cuniculus
ENSCHIG00000024245	GPATCH3	92	55.644	ENSORLG00000004435	gpatch3	96	56.832	Oryzias_latipes
ENSCHIG00000024245	GPATCH3	92	54.808	ENSORLG00020022609	gpatch3	97	55.945	Oryzias_latipes_hni
ENSCHIG00000024245	GPATCH3	92	55.403	ENSORLG00015008692	gpatch3	92	62.540	Oryzias_latipes_hsok
ENSCHIG00000024245	GPATCH3	92	56.200	ENSOMEG00000010991	gpatch3	96	57.000	Oryzias_melastigma
ENSCHIG00000024245	GPATCH3	98	83.269	ENSOGAG00000011647	GPATCH3	99	83.269	Otolemur_garnettii
ENSCHIG00000024245	GPATCH3	100	98.117	ENSOARG00000003955	GPATCH3	100	98.117	Ovis_aries
ENSCHIG00000024245	GPATCH3	98	83.429	ENSPPAG00000032902	GPATCH3	100	83.429	Pan_paniscus
ENSCHIG00000024245	GPATCH3	98	87.308	ENSPPRG00000024244	GPATCH3	100	87.308	Panthera_pardus
ENSCHIG00000024245	GPATCH3	98	86.148	ENSPTIG00000014693	GPATCH3	100	86.148	Panthera_tigris_altaica
ENSCHIG00000024245	GPATCH3	98	83.810	ENSPTRG00000023419	GPATCH3	100	83.810	Pan_troglodytes
ENSCHIG00000024245	GPATCH3	98	84.381	ENSPANG00000007984	GPATCH3	100	84.381	Papio_anubis
ENSCHIG00000024245	GPATCH3	94	57.171	ENSPKIG00000020073	gpatch3	96	56.974	Paramormyrops_kingsleyae
ENSCHIG00000024245	GPATCH3	77	69.512	ENSPSIG00000017160	GPATCH3	99	69.512	Pelodiscus_sinensis
ENSCHIG00000024245	GPATCH3	94	55.731	ENSPMGG00000001703	gpatch3	97	55.336	Periophthalmus_magnuspinnatus
ENSCHIG00000024245	GPATCH3	98	81.524	ENSPEMG00000020632	Gpatch3	100	82.286	Peromyscus_maniculatus_bairdii
ENSCHIG00000024245	GPATCH3	96	74.805	ENSPCIG00000012681	GPATCH3	96	75.391	Phascolarctos_cinereus
ENSCHIG00000024245	GPATCH3	94	55.929	ENSPFOG00000009928	gpatch3	97	56.719	Poecilia_formosa
ENSCHIG00000024245	GPATCH3	94	54.264	ENSPLAG00000023784	gpatch3	97	55.039	Poecilia_latipinna
ENSCHIG00000024245	GPATCH3	94	55.058	ENSPMEG00000010268	gpatch3	97	55.837	Poecilia_mexicana
ENSCHIG00000024245	GPATCH3	94	56.914	ENSPREG00000008873	gpatch3	97	56.914	Poecilia_reticulata
ENSCHIG00000024245	GPATCH3	96	85.156	ENSPPYG00000001675	GPATCH3	100	84.571	Pongo_abelii
ENSCHIG00000024245	GPATCH3	98	83.556	ENSPCAG00000008286	GPATCH3	100	83.556	Procavia_capensis
ENSCHIG00000024245	GPATCH3	98	85.333	ENSPCOG00000020145	GPATCH3	100	85.333	Propithecus_coquereli
ENSCHIG00000024245	GPATCH3	98	78.503	ENSPVAG00000017282	GPATCH3	100	78.695	Pteropus_vampyrus
ENSCHIG00000024245	GPATCH3	94	54.134	ENSPNYG00000005172	gpatch3	99	54.134	Pundamilia_nyererei
ENSCHIG00000024245	GPATCH3	93	56.335	ENSPNAG00000018501	gpatch3	97	56.335	Pygocentrus_nattereri
ENSCHIG00000024245	GPATCH3	98	81.226	ENSRNOG00000007097	Gpatch3	100	81.992	Rattus_norvegicus
ENSCHIG00000024245	GPATCH3	98	83.810	ENSRBIG00000005853	GPATCH3	100	83.810	Rhinopithecus_bieti
ENSCHIG00000024245	GPATCH3	98	83.619	ENSRROG00000038382	GPATCH3	100	83.619	Rhinopithecus_roxellana
ENSCHIG00000024245	GPATCH3	97	84.466	ENSSBOG00000019680	GPATCH3	100	86.501	Saimiri_boliviensis_boliviensis
ENSCHIG00000024245	GPATCH3	97	73.755	ENSSHAG00000014268	GPATCH3	98	74.576	Sarcophilus_harrisii
ENSCHIG00000024245	GPATCH3	94	55.859	ENSSFOG00015009602	gpatch3	98	55.859	Scleropages_formosus
ENSCHIG00000024245	GPATCH3	94	55.599	ENSSMAG00000002067	gpatch3	97	54.813	Scophthalmus_maximus
ENSCHIG00000024245	GPATCH3	92	55.823	ENSSDUG00000017071	gpatch3	96	55.422	Seriola_dumerili
ENSCHIG00000024245	GPATCH3	92	55.622	ENSSLDG00000016549	gpatch3	96	55.221	Seriola_lalandi_dorsalis
ENSCHIG00000024245	GPATCH3	94	61.554	ENSSPUG00000018299	GPATCH3	96	61.554	Sphenodon_punctatus
ENSCHIG00000024245	GPATCH3	94	55.186	ENSSPAG00000013046	gpatch3	97	56.164	Stegastes_partitus
ENSCHIG00000024245	GPATCH3	98	87.692	ENSSSCG00000003564	GPATCH3	97	87.692	Sus_scrofa
ENSCHIG00000024245	GPATCH3	76	65.672	ENSTGUG00000000986	GPATCH3	100	65.672	Taeniopygia_guttata
ENSCHIG00000024245	GPATCH3	94	52.481	ENSTRUG00000013294	gpatch3	98	52.481	Takifugu_rubripes
ENSCHIG00000024245	GPATCH3	94	54.102	ENSTNIG00000009657	gpatch3	99	54.102	Tetraodon_nigroviridis
ENSCHIG00000024245	GPATCH3	83	86.628	ENSTBEG00000002042	GPATCH3	85	86.628	Tupaia_belangeri
ENSCHIG00000024245	GPATCH3	96	82.122	ENSTTRG00000016677	GPATCH3	100	81.766	Tursiops_truncatus
ENSCHIG00000024245	GPATCH3	98	88.247	ENSUAMG00000026235	GPATCH3	100	88.247	Ursus_americanus
ENSCHIG00000024245	GPATCH3	98	88.247	ENSUMAG00000011894	GPATCH3	100	88.247	Ursus_maritimus
ENSCHIG00000024245	GPATCH3	98	88.825	ENSVVUG00000012041	GPATCH3	100	88.825	Vulpes_vulpes
ENSCHIG00000024245	GPATCH3	93	53.226	ENSXETG00000030345	GPATCH3	99	53.226	Xenopus_tropicalis
ENSCHIG00000024245	GPATCH3	94	52.323	ENSXCOG00000016129	gpatch3	97	52.323	Xiphophorus_couchianus
ENSCHIG00000024245	GPATCH3	94	55.490	ENSXMAG00000010749	gpatch3	97	54.902	Xiphophorus_maculatus