EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCHIG00000024304 (Gene tree)
Gene ID
102178650
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Capra_hircus
Status
putative
Strand
Plus strand
Length
22086 bases
Position
chr17:8440074-8462159
Accession
102178650
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHIP00000029041RRM_1PF00076.226.6e-3412
ENSCHIP00000029041RRM_1PF00076.226.6e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHIT00000036912MSI1-2011098XM_018061131ENSCHIP00000029041365 (aa)XP_017916620UPI000D18F41A
Gene Model
Click here to download ENSCHIG00000024304's gene model file
Pathways
Pathway IDPathway NameSource
chx03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000024304's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCHIG00000024304MSI19668.466ENSCHIG00000016580MSI29669.602
ENSCHIG00000024304MSI15140.686ENSCHIG00000015430-6741.509
ENSCHIG00000024304MSI15241.346ENSCHIG00000024694DAZAP15341.346
ENSCHIG00000024304MSI15435.859ENSCHIG00000026095-5440.000
ENSCHIG00000024304MSI15241.146ENSCHIG00000020945-7437.344
ENSCHIG00000024304MSI15337.374ENSCHIG00000015099-8737.374
ENSCHIG00000024304MSI15144.162ENSCHIG00000022317HNRNPD7240.161
ENSCHIG00000024304MSI17034.783ENSCHIG00000013536RBM247441.250
ENSCHIG00000024304MSI15437.179ENSCHIG00000018541-7137.179
ENSCHIG00000024304MSI16744.262ENSCHIG00000008431-7244.262
ENSCHIG00000024304MSI15035.789ENSCHIG00000011332-8734.199
ENSCHIG00000024304MSI16035.632ENSCHIG00000015804-6135.632
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHIG00000024304MSI110094.580ENSG00000135097MSI110094.580Homo_sapiens
ENSCHIG00000024304MSI110082.016ENSAPOG00000023458-10082.016Acanthochromis_polyacanthus
ENSCHIG00000024304MSI110082.114ENSAPOG00000003191MSI110082.114Acanthochromis_polyacanthus
ENSCHIG00000024304MSI19880.729ENSAMEG00000013302MSI110080.729Ailuropoda_melanoleuca
ENSCHIG00000024304MSI19581.928ENSACIG00000017754-7881.928Amphilophus_citrinellus
ENSCHIG00000024304MSI110082.114ENSAOCG00000003804MSI110082.114Amphiprion_ocellaris
ENSCHIG00000024304MSI19876.522ENSAOCG00000009031-9577.681Amphiprion_ocellaris
ENSCHIG00000024304MSI110082.016ENSAPEG00000006857-8482.016Amphiprion_percula
ENSCHIG00000024304MSI110082.114ENSAPEG00000003245MSI110082.114Amphiprion_percula
ENSCHIG00000024304MSI110077.989ENSATEG00000023779-10077.989Anabas_testudineus
ENSCHIG00000024304MSI19882.388ENSATEG00000017059MSI110078.284Anabas_testudineus
ENSCHIG00000024304MSI110091.081ENSACAG00000002762MSI110091.081Anolis_carolinensis
ENSCHIG00000024304MSI110094.580ENSANAG00000027151MSI110094.580Aotus_nancymaae
ENSCHIG00000024304MSI18290.228ENSANAG00000027901-9290.228Aotus_nancymaae
ENSCHIG00000024304MSI110081.744ENSACLG00000000117-10082.948Astatotilapia_calliptera
ENSCHIG00000024304MSI110081.843ENSACLG00000011230MSI110081.843Astatotilapia_calliptera
ENSCHIG00000024304MSI19879.403ENSAMXG00000038960msi17681.306Astyanax_mexicanus
ENSCHIG00000024304MSI110094.580ENSBTAG00000009800MSI110094.580Bos_taurus
ENSCHIG00000024304MSI110094.580ENSCJAG00000008578MSI110094.580Callithrix_jacchus
ENSCHIG00000024304MSI110094.309ENSCAFG00000010283MSI110094.309Canis_familiaris
ENSCHIG00000024304MSI19893.711ENSCAFG00020020585MSI110093.711Canis_lupus_dingo
ENSCHIG00000024304MSI19894.012ENSTSYG00000033949MSI19594.012Carlito_syrichta
ENSCHIG00000024304MSI19583.750ENSCAPG00000003919MSI18983.750Cavia_aperea
ENSCHIG00000024304MSI19894.269ENSCPOG00000012361MSI110094.269Cavia_porcellus
ENSCHIG00000024304MSI110094.580ENSCCAG00000035567MSI110094.580Cebus_capucinus
ENSCHIG00000024304MSI110094.580ENSCATG00000030019MSI110094.580Cercocebus_atys
ENSCHIG00000024304MSI19894.269ENSCLAG00000011329MSI110094.269Chinchilla_lanigera
ENSCHIG00000024304MSI167100.000ENSCSAG00000002265MSI184100.000Chlorocebus_sabaeus
ENSCHIG00000024304MSI110090.515ENSCPBG00000011349MSI110090.515Chrysemys_picta_bellii
ENSCHIG00000024304MSI19894.030ENSCANG00000040651MSI110094.030Colobus_angolensis_palliatus
ENSCHIG00000024304MSI110095.109ENSCGRG00001018883Msi110095.109Cricetulus_griseus_chok1gshd
ENSCHIG00000024304MSI19594.048ENSCGRG00000002191Msi17294.048Cricetulus_griseus_crigri
ENSCHIG00000024304MSI110081.843ENSCSEG00000005834-10081.843Cynoglossus_semilaevis
ENSCHIG00000024304MSI19877.616ENSCSEG00000011032MSI110077.616Cynoglossus_semilaevis
ENSCHIG00000024304MSI110080.926ENSCSEG00000008352-10080.926Cynoglossus_semilaevis
ENSCHIG00000024304MSI16466.525ENSCVAG00000017463-8966.525Cyprinodon_variegatus
ENSCHIG00000024304MSI110082.016ENSCVAG00000009100MSI110082.016Cyprinodon_variegatus
ENSCHIG00000024304MSI18079.060ENSDARG00000102015CABZ01037298.18979.060Danio_rerio
ENSCHIG00000024304MSI19880.665ENSDARG00000010710msi110081.466Danio_rerio
ENSCHIG00000024304MSI19884.226ENSDNOG00000005713MSI19184.226Dasypus_novemcinctus
ENSCHIG00000024304MSI19893.255ENSDORG00000005610Msi19990.028Dipodomys_ordii
ENSCHIG00000024304MSI19889.851ENSETEG00000004756MSI110089.851Echinops_telfairi
ENSCHIG00000024304MSI110094.580ENSEASG00005004736MSI110094.580Equus_asinus_asinus
ENSCHIG00000024304MSI110094.580ENSECAG00000017526MSI110094.580Equus_caballus
ENSCHIG00000024304MSI19877.929ENSELUG00000023219MSI19278.729Esox_lucius
ENSCHIG00000024304MSI19580.523ENSELUG00000023280-10080.233Esox_lucius
ENSCHIG00000024304MSI110094.580ENSFCAG00000011007MSI110094.580Felis_catus
ENSCHIG00000024304MSI19889.623ENSFALG00000007574MSI110089.623Ficedula_albicollis
ENSCHIG00000024304MSI19893.731ENSFDAG00000019586MSI110093.731Fukomys_damarensis
ENSCHIG00000024304MSI110082.289ENSFHEG00000022446MSI110082.289Fundulus_heteroclitus
ENSCHIG00000024304MSI110082.114ENSFHEG00000003560-10082.114Fundulus_heteroclitus
ENSCHIG00000024304MSI110074.728ENSGMOG00000017838-10074.728Gadus_morhua
ENSCHIG00000024304MSI110080.381ENSGMOG00000001006MSI19980.109Gadus_morhua
ENSCHIG00000024304MSI19588.214ENSGALG00000007227MSI19882.161Gallus_gallus
ENSCHIG00000024304MSI110064.674ENSGAFG00000005860-10064.674Gambusia_affinis
ENSCHIG00000024304MSI19883.862ENSGAFG00000021522MSI19483.862Gambusia_affinis
ENSCHIG00000024304MSI110081.199ENSGACG00000012679MSI110081.199Gasterosteus_aculeatus
ENSCHIG00000024304MSI110079.837ENSGACG00000008674-10079.837Gasterosteus_aculeatus
ENSCHIG00000024304MSI110090.244ENSGAGG00000016037MSI110090.244Gopherus_agassizii
ENSCHIG00000024304MSI19893.769ENSGGOG00000010328MSI110093.769Gorilla_gorilla
ENSCHIG00000024304MSI110081.843ENSHBUG00000021921MSI110081.843Haplochromis_burtoni
ENSCHIG00000024304MSI110081.744ENSHBUG00000011841-10081.744Haplochromis_burtoni
ENSCHIG00000024304MSI110094.309ENSHGLG00000012782MSI110094.309Heterocephalus_glaber_female
ENSCHIG00000024304MSI19893.731ENSHGLG00100016848MSI110093.731Heterocephalus_glaber_male
ENSCHIG00000024304MSI19880.233ENSHCOG00000012019MSI110080.233Hippocampus_comes
ENSCHIG00000024304MSI110076.550ENSHCOG00000012067-10076.550Hippocampus_comes
ENSCHIG00000024304MSI110080.109ENSIPUG00000001976msi110080.109Ictalurus_punctatus
ENSCHIG00000024304MSI19893.711ENSSTOG00000009799MSI110093.711Ictidomys_tridecemlineatus
ENSCHIG00000024304MSI110095.890ENSJJAG00000010463Msi110095.890Jaculus_jaculus
ENSCHIG00000024304MSI110081.644ENSJJAG00000010643-10081.918Jaculus_jaculus
ENSCHIG00000024304MSI110081.471ENSKMAG00000011251MSI110081.471Kryptolebias_marmoratus
ENSCHIG00000024304MSI19882.849ENSKMAG00000019877-10082.849Kryptolebias_marmoratus
ENSCHIG00000024304MSI110081.843ENSLBEG00000001375-10081.843Labrus_bergylta
ENSCHIG00000024304MSI110082.016ENSLBEG00000008789MSI110082.016Labrus_bergylta
ENSCHIG00000024304MSI19886.127ENSLACG00000018287MSI110086.127Latimeria_chalumnae
ENSCHIG00000024304MSI15070.000ENSLOCG00000008618zgc:1107967170.000Lepisosteus_oculatus
ENSCHIG00000024304MSI19183.728ENSLAFG00000009412MSI110083.728Loxodonta_africana
ENSCHIG00000024304MSI19894.269ENSMFAG00000001798MSI110094.269Macaca_fascicularis
ENSCHIG00000024304MSI19594.269ENSMMUG00000031527MSI19792.737Macaca_mulatta
ENSCHIG00000024304MSI110094.580ENSMNEG00000040034MSI110094.580Macaca_nemestrina
ENSCHIG00000024304MSI19894.030ENSMLEG00000003921MSI110094.030Mandrillus_leucophaeus
ENSCHIG00000024304MSI110081.199ENSMAMG00000002279MSI110081.199Mastacembelus_armatus
ENSCHIG00000024304MSI19684.181ENSMAMG00000018426-10082.114Mastacembelus_armatus
ENSCHIG00000024304MSI110081.744ENSMZEG00005000340-10081.744Maylandia_zebra
ENSCHIG00000024304MSI110081.843ENSMZEG00005026892MSI110081.843Maylandia_zebra
ENSCHIG00000024304MSI16498.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSCHIG00000024304MSI16795.833ENSMAUG00000016820Msi19995.833Mesocricetus_auratus
ENSCHIG00000024304MSI110094.580ENSMICG00000033181MSI110094.580Microcebus_murinus
ENSCHIG00000024304MSI110094.309ENSMOCG00000002286Msi110094.309Microtus_ochrogaster
ENSCHIG00000024304MSI19869.275ENSMMOG00000010492MSI19470.029Mola_mola
ENSCHIG00000024304MSI19880.838ENSMMOG00000012265-9979.706Mola_mola
ENSCHIG00000024304MSI19167.066ENSMODG00000003189-10067.066Monodelphis_domestica
ENSCHIG00000024304MSI19883.237ENSMALG00000001426-10083.237Monopterus_albus
ENSCHIG00000024304MSI110081.744ENSMALG00000017889MSI110081.744Monopterus_albus
ENSCHIG00000024304MSI110094.309MGP_CAROLIEiJ_G0027626Msi110094.309Mus_caroli
ENSCHIG00000024304MSI110094.309ENSMUSG00000054256Msi110094.309Mus_musculus
ENSCHIG00000024304MSI110094.038MGP_PahariEiJ_G0024206Msi110094.038Mus_pahari
ENSCHIG00000024304MSI110094.309MGP_SPRETEiJ_G0028624Msi110094.309Mus_spretus
ENSCHIG00000024304MSI19893.711ENSMPUG00000003168MSI110093.711Mustela_putorius_furo
ENSCHIG00000024304MSI19884.548ENSMLUG00000010313MSI110084.548Myotis_lucifugus
ENSCHIG00000024304MSI19888.493ENSNGAG00000014508Msi19788.493Nannospalax_galili
ENSCHIG00000024304MSI18875.573ENSNBRG00000018012MSI19975.573Neolamprologus_brichardi
ENSCHIG00000024304MSI110081.744ENSNBRG00000000841-10081.744Neolamprologus_brichardi
ENSCHIG00000024304MSI19183.881ENSNLEG00000015636MSI110083.881Nomascus_leucogenys
ENSCHIG00000024304MSI19572.239ENSMEUG00000015759MSI110072.239Notamacropus_eugenii
ENSCHIG00000024304MSI19586.025ENSOPRG00000016879MSI110086.025Ochotona_princeps
ENSCHIG00000024304MSI19894.030ENSODEG00000006328MSI110094.030Octodon_degus
ENSCHIG00000024304MSI110082.114ENSONIG00000019452-10082.114Oreochromis_niloticus
ENSCHIG00000024304MSI110081.744ENSONIG00000011182MSI110081.744Oreochromis_niloticus
ENSCHIG00000024304MSI19893.396ENSOCUG00000027716MSI110093.396Oryctolagus_cuniculus
ENSCHIG00000024304MSI110082.289ENSORLG00000019978-10082.289Oryzias_latipes
ENSCHIG00000024304MSI110082.385ENSORLG00000029593MSI110082.385Oryzias_latipes
ENSCHIG00000024304MSI110082.289ENSORLG00020001208-7182.289Oryzias_latipes_hni
ENSCHIG00000024304MSI110082.385ENSORLG00020008266MSI19982.319Oryzias_latipes_hni
ENSCHIG00000024304MSI110082.289ENSORLG00015013672-7680.548Oryzias_latipes_hsok
ENSCHIG00000024304MSI110082.385ENSORLG00015003916MSI110082.385Oryzias_latipes_hsok
ENSCHIG00000024304MSI19885.303ENSOMEG00000002272-10083.198Oryzias_melastigma
ENSCHIG00000024304MSI110082.561ENSOMEG00000017536MSI110082.561Oryzias_melastigma
ENSCHIG00000024304MSI19990.296ENSOGAG00000003847MSI19990.296Otolemur_garnettii
ENSCHIG00000024304MSI19890.208ENSOARG00000012097MSI110090.208Ovis_aries
ENSCHIG00000024304MSI19894.030ENSPPAG00000043073MSI110094.030Pan_paniscus
ENSCHIG00000024304MSI110094.580ENSPPRG00000000370MSI110094.580Panthera_pardus
ENSCHIG00000024304MSI19893.711ENSPTIG00000008913MSI110093.711Panthera_tigris_altaica
ENSCHIG00000024304MSI110094.580ENSPTRG00000005531MSI110094.580Pan_troglodytes
ENSCHIG00000024304MSI110094.309ENSPANG00000006335MSI110094.309Papio_anubis
ENSCHIG00000024304MSI110083.379ENSPKIG00000016497MSI110083.379Paramormyrops_kingsleyae
ENSCHIG00000024304MSI19683.523ENSPKIG00000023575-10081.744Paramormyrops_kingsleyae
ENSCHIG00000024304MSI18084.322ENSPSIG00000009621-10084.322Pelodiscus_sinensis
ENSCHIG00000024304MSI19886.533ENSPSIG00000011608-9387.106Pelodiscus_sinensis
ENSCHIG00000024304MSI19581.024ENSPMGG00000000514MSI19781.024Periophthalmus_magnuspinnatus
ENSCHIG00000024304MSI19570.605ENSPMGG00000007743-8971.182Periophthalmus_magnuspinnatus
ENSCHIG00000024304MSI19989.560ENSPEMG00000010491Msi19989.560Peromyscus_maniculatus_bairdii
ENSCHIG00000024304MSI110082.016ENSPFOG00000013113MSI110082.016Poecilia_formosa
ENSCHIG00000024304MSI110082.385ENSPFOG00000008319-8682.385Poecilia_formosa
ENSCHIG00000024304MSI110082.016ENSPLAG00000014025-10082.016Poecilia_latipinna
ENSCHIG00000024304MSI110082.385ENSPLAG00000012431-9782.385Poecilia_latipinna
ENSCHIG00000024304MSI110082.016ENSPMEG00000012796MSI110082.016Poecilia_mexicana
ENSCHIG00000024304MSI110081.843ENSPMEG00000007025-9377.937Poecilia_mexicana
ENSCHIG00000024304MSI16277.533ENSPREG00000014574-10077.533Poecilia_reticulata
ENSCHIG00000024304MSI19877.591ENSPREG00000021416-9579.083Poecilia_reticulata
ENSCHIG00000024304MSI110093.767ENSPPYG00000005027MSI110093.767Pongo_abelii
ENSCHIG00000024304MSI19870.357ENSPCAG00000002300MSI110070.357Procavia_capensis
ENSCHIG00000024304MSI110094.580ENSPCOG00000017341MSI110094.580Propithecus_coquereli
ENSCHIG00000024304MSI19877.612ENSPVAG00000002225MSI110077.612Pteropus_vampyrus
ENSCHIG00000024304MSI110081.843ENSPNYG00000004379MSI110081.843Pundamilia_nyererei
ENSCHIG00000024304MSI110081.744ENSPNYG00000002529-10081.744Pundamilia_nyererei
ENSCHIG00000024304MSI110080.381ENSPNAG00000019337msi110080.381Pygocentrus_nattereri
ENSCHIG00000024304MSI19893.396ENSRNOG00000001156Msi110093.396Rattus_norvegicus
ENSCHIG00000024304MSI19893.711ENSRBIG00000036889MSI110093.711Rhinopithecus_bieti
ENSCHIG00000024304MSI19893.769ENSRROG00000041076MSI19393.769Rhinopithecus_roxellana
ENSCHIG00000024304MSI19894.269ENSSBOG00000030259MSI19894.269Saimiri_boliviensis_boliviensis
ENSCHIG00000024304MSI19581.150ENSSHAG00000006834MSI110081.150Sarcophilus_harrisii
ENSCHIG00000024304MSI19885.014ENSSFOG00015014964-9585.014Scleropages_formosus
ENSCHIG00000024304MSI19885.591ENSSFOG00015005350MSI110083.140Scleropages_formosus
ENSCHIG00000024304MSI19583.571ENSSMAG00000009156-7183.571Scophthalmus_maximus
ENSCHIG00000024304MSI19881.024ENSSMAG00000018824MSI19781.024Scophthalmus_maximus
ENSCHIG00000024304MSI110082.114ENSSDUG00000022697-10082.114Seriola_dumerili
ENSCHIG00000024304MSI110082.016ENSSDUG00000001027MSI110082.016Seriola_dumerili
ENSCHIG00000024304MSI110082.016ENSSLDG00000016832MSI110082.016Seriola_lalandi_dorsalis
ENSCHIG00000024304MSI19880.240ENSSLDG00000018706-9781.493Seriola_lalandi_dorsalis
ENSCHIG00000024304MSI110089.702ENSSPUG00000015741MSI110089.702Sphenodon_punctatus
ENSCHIG00000024304MSI15274.375ENSSPAG00000015573zgc:1107968274.375Stegastes_partitus
ENSCHIG00000024304MSI16258.150ENSSPAG00000014085-10058.150Stegastes_partitus
ENSCHIG00000024304MSI19884.682ENSSPAG00000013098-10084.682Stegastes_partitus
ENSCHIG00000024304MSI110094.309ENSSSCG00000029365MSI110094.309Sus_scrofa
ENSCHIG00000024304MSI19891.117ENSTGUG00000009534MSI110091.117Taeniopygia_guttata
ENSCHIG00000024304MSI18177.542ENSTRUG00000016249MSI110070.956Takifugu_rubripes
ENSCHIG00000024304MSI19571.687ENSTRUG00000015636-7968.072Takifugu_rubripes
ENSCHIG00000024304MSI110077.027ENSTNIG00000011469MSI110077.027Tetraodon_nigroviridis
ENSCHIG00000024304MSI19862.703ENSTNIG00000019814-9962.703Tetraodon_nigroviridis
ENSCHIG00000024304MSI19582.500ENSTBEG00000007182MSI110082.500Tupaia_belangeri
ENSCHIG00000024304MSI19875.931ENSTTRG00000005663MSI110075.931Tursiops_truncatus
ENSCHIG00000024304MSI17491.189ENSUAMG00000015514MSI19495.327Ursus_americanus
ENSCHIG00000024304MSI19891.850ENSUMAG00000006176MSI19091.850Ursus_maritimus
ENSCHIG00000024304MSI19893.235ENSVVUG00000020993MSI110093.235Vulpes_vulpes
ENSCHIG00000024304MSI110086.253ENSXETG00000012216msi110086.327Xenopus_tropicalis
ENSCHIG00000024304MSI19571.304ENSXCOG00000017605MSI18971.304Xiphophorus_couchianus
ENSCHIG00000024304MSI110082.114ENSXMAG00000018237-10082.114Xiphophorus_maculatus
ENSCHIG00000024304MSI110082.016ENSXMAG00000027103MSI110073.387Xiphophorus_maculatus

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