EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000024357 (Gene tree)
Gene ID: 102187281
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 8931 bases
Position: chr3:85873330-85882260
Accession: 102187281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000029107	PRP38	PF03371.15	1.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000036977	-	3452	XM_013962575	ENSCHIP00000029107	543 (aa)	XP_013818029	UPI00005BC144

Gene Model

Click here to download ENSCHIG00000024357's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000024357's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000024357	-	83	61.587	ENSATEG00000014482	-	59	83.755	Anabas_testudineus
ENSCHIG00000024357	-	100	100.000	ENSBTAG00000047874	PRPF38B	100	100.000	Bos_taurus
ENSCHIG00000024357	-	100	79.745	ENSCAFG00020010992	-	100	88.686	Canis_lupus_dingo
ENSCHIG00000024357	-	80	93.072	ENSCAPG00000009606	-	98	93.317	Cavia_aperea
ENSCHIG00000024357	-	100	94.495	ENSCPOG00000039545	-	100	94.312	Cavia_porcellus
ENSCHIG00000024357	-	100	94.161	ENSCLAG00000005801	-	100	94.526	Chinchilla_lanigera
ENSCHIG00000024357	-	65	84.136	ENSCHOG00000008972	-	100	86.119	Choloepus_hoffmanni
ENSCHIG00000024357	-	100	86.545	ENSCPBG00000028299	-	100	86.654	Chrysemys_picta_bellii
ENSCHIG00000024357	-	54	56.357	ENSCSAVG00000009443	-	70	74.737	Ciona_savignyi
ENSCHIG00000024357	-	93	60.429	ENSCSEG00000015030	-	60	81.159	Cynoglossus_semilaevis
ENSCHIG00000024357	-	83	92.683	ENSETEG00000014690	-	73	95.092	Echinops_telfairi
ENSCHIG00000024357	-	57	71.613	ENSELUG00000010390	-	50	78.113	Esox_lucius
ENSCHIG00000024357	-	83	86.374	ENSFALG00000002673	-	88	89.183	Ficedula_albicollis
ENSCHIG00000024357	-	94	58.476	ENSGMOG00000012080	-	58	81.985	Gadus_morhua
ENSCHIG00000024357	-	100	86.751	ENSGALG00000001972	-	100	86.521	Gallus_gallus
ENSCHIG00000024357	-	85	61.297	ENSGAFG00000008943	-	59	84.420	Gambusia_affinis
ENSCHIG00000024357	-	100	86.909	ENSGAGG00000001563	-	100	87.020	Gopherus_agassizii
ENSCHIG00000024357	-	100	95.073	ENSHGLG00000016583	PRPF38B	100	95.255	Heterocephalus_glaber_female
ENSCHIG00000024357	-	100	94.891	ENSHGLG00100015525	-	100	95.073	Heterocephalus_glaber_male
ENSCHIG00000024357	-	78	63.362	ENSHCOG00000001071	-	61	82.206	Hippocampus_comes
ENSCHIG00000024357	-	81	61.407	ENSKMAG00000005540	-	58	82.117	Kryptolebias_marmoratus
ENSCHIG00000024357	-	97	73.732	ENSLACG00000015511	-	51	90.975	Latimeria_chalumnae
ENSCHIG00000024357	-	100	87.132	ENSMOCG00000020285	-	100	93.199	Microtus_ochrogaster
ENSCHIG00000024357	-	76	62.754	ENSMMOG00000011639	-	60	82.310	Mola_mola
ENSCHIG00000024357	-	60	94.562	ENSMODG00000002350	-	100	93.078	Monodelphis_domestica
ENSCHIG00000024357	-	93	60.886	ENSMALG00000019479	-	59	84.116	Monopterus_albus
ENSCHIG00000024357	-	80	93.801	ENSOPRG00000013543	-	81	93.801	Ochotona_princeps
ENSCHIG00000024357	-	82	65.096	ENSONIG00000010129	-	60	83.755	Oreochromis_niloticus
ENSCHIG00000024357	-	90	80.000	ENSOANG00000007343	-	95	91.131	Ornithorhynchus_anatinus
ENSCHIG00000024357	-	85	63.445	ENSORLG00000015621	-	88	91.558	Oryzias_latipes
ENSCHIG00000024357	-	85	63.235	ENSORLG00020016276	-	88	91.558	Oryzias_latipes_hni
ENSCHIG00000024357	-	93	60.742	ENSORLG00015016270	-	74	91.558	Oryzias_latipes_hsok
ENSCHIG00000024357	-	85	64.076	ENSOMEG00000022050	-	91	91.026	Oryzias_melastigma
ENSCHIG00000024357	-	100	95.255	ENSOGAG00000027048	-	100	95.620	Otolemur_garnettii
ENSCHIG00000024357	-	100	97.790	ENSOARG00000018899	-	100	97.790	Ovis_aries
ENSCHIG00000024357	-	97	62.756	ENSPKIG00000004815	-	57	81.908	Paramormyrops_kingsleyae
ENSCHIG00000024357	-	94	65.091	ENSPKIG00000017291	-	52	78.361	Paramormyrops_kingsleyae
ENSCHIG00000024357	-	100	85.818	ENSPSIG00000016569	-	100	86.654	Pelodiscus_sinensis
ENSCHIG00000024357	-	85	61.925	ENSPFOG00000004025	-	81	92.208	Poecilia_formosa
ENSCHIG00000024357	-	85	61.925	ENSPLAG00000019842	-	59	84.783	Poecilia_latipinna
ENSCHIG00000024357	-	85	61.667	ENSPMEG00000004807	-	58	84.783	Poecilia_mexicana
ENSCHIG00000024357	-	85	61.088	ENSPREG00000015599	-	83	92.208	Poecilia_reticulata
ENSCHIG00000024357	-	51	84.286	ENSPNAG00000017484	-	54	84.173	Pygocentrus_nattereri
ENSCHIG00000024357	-	100	91.193	ENSRNOG00000020438	Prpf38b	100	93.028	Rattus_norvegicus
ENSCHIG00000024357	-	94	62.791	ENSSFOG00015011251	-	79	97.351	Scleropages_formosus
ENSCHIG00000024357	-	85	62.398	ENSSLDG00000023487	-	83	91.558	Seriola_lalandi_dorsalis
ENSCHIG00000024357	-	100	84.783	ENSSPUG00000017742	-	100	84.601	Sphenodon_punctatus
ENSCHIG00000024357	-	78	62.128	ENSTRUG00000011765	-	60	83.094	Takifugu_rubripes
ENSCHIG00000024357	-	79	59.594	ENSTNIG00000015299	-	69	81.915	Tetraodon_nigroviridis
ENSCHIG00000024357	-	94	91.389	ENSTBEG00000007504	-	100	91.389	Tupaia_belangeri
ENSCHIG00000024357	-	100	97.610	ENSTTRG00000006479	-	100	97.610	Tursiops_truncatus
ENSCHIG00000024357	-	99	88.376	ENSVPAG00000005541	-	99	88.930	Vicugna_pacos
ENSCHIG00000024357	-	94	74.563	ENSXETG00000005260	prpf38b	58	84.918	Xenopus_tropicalis
ENSCHIG00000024357	-	85	60.780	ENSXCOG00000008329	-	59	84.420	Xiphophorus_couchianus
ENSCHIG00000024357	-	85	61.191	ENSXMAG00000023831	-	59	84.420	Xiphophorus_maculatus