EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000024413 (Gene tree)
Gene ID: 102190356
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 92043 bases
Position: chr20:23790107-23882149
Accession: 102190356
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000029280	rRNA_proc-arch	PF13234.6	1.2e-86	1	1
ENSCHIP00000029295	rRNA_proc-arch	PF13234.6	1.3e-86	1	1
ENSCHIP00000029302	rRNA_proc-arch	PF13234.6	6.6e-67	1	2
ENSCHIP00000029302	rRNA_proc-arch	PF13234.6	6.6e-67	2	2
ENSCHIP00000029302	DEAD	PF00270.29	4.9e-17	1	1
ENSCHIP00000029280	DEAD	PF00270.29	5.2e-17	1	1
ENSCHIP00000029295	DEAD	PF00270.29	5.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000037165	MTREX-202	3123	-	ENSCHIP00000029295	1040 (aa)	-	UPI000D18CB4C
ENSCHIT00000037151	MTREX-201	3129	XM_005694702	ENSCHIP00000029280	1042 (aa)	XP_005694759	UPI00029D7F15
ENSCHIT00000037172	MTREX-203	3018	-	ENSCHIP00000029302	1005 (aa)	-	UPI000D19054A

Gene Model

Click here to download ENSCHIG00000024413's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000024413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000024413	MTREX	88	37.137	ENSCHIG00000012897	SKIV2L	76	37.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000024413	MTREX	100	98.464	ENSG00000039123	MTREX	100	98.464	Homo_sapiens
ENSCHIG00000024413	MTREX	100	82.952	ENSAPOG00000007814	mtrex	100	83.048	Acanthochromis_polyacanthus
ENSCHIG00000024413	MTREX	100	98.754	ENSAMEG00000013856	MTREX	100	98.754	Ailuropoda_melanoleuca
ENSCHIG00000024413	MTREX	100	82.218	ENSACIG00000015117	mtrex	100	82.218	Amphilophus_citrinellus
ENSCHIG00000024413	MTREX	100	83.238	ENSAOCG00000011884	mtrex	100	83.238	Amphiprion_ocellaris
ENSCHIG00000024413	MTREX	100	83.143	ENSAPEG00000019384	mtrex	100	83.143	Amphiprion_percula
ENSCHIG00000024413	MTREX	100	83.985	ENSATEG00000015117	mtrex	100	83.985	Anabas_testudineus
ENSCHIG00000024413	MTREX	95	92.720	ENSAPLG00000009694	MTREX	99	92.720	Anas_platyrhynchos
ENSCHIG00000024413	MTREX	100	90.691	ENSACAG00000015200	MTREX	96	90.595	Anolis_carolinensis
ENSCHIG00000024413	MTREX	100	98.560	ENSANAG00000023095	MTREX	100	98.560	Aotus_nancymaae
ENSCHIG00000024413	MTREX	100	82.493	ENSACLG00000001921	mtrex	100	82.588	Astatotilapia_calliptera
ENSCHIG00000024413	MTREX	97	81.631	ENSAMXG00000018751	mtrex	99	83.936	Astyanax_mexicanus
ENSCHIG00000024413	MTREX	100	99.424	ENSBTAG00000010518	MTREX	100	99.424	Bos_taurus
ENSCHIG00000024413	MTREX	91	53.733	WBGene00012342	mtr-4	98	52.127	Caenorhabditis_elegans
ENSCHIG00000024413	MTREX	100	97.615	ENSCJAG00000001773	MTREX	100	97.615	Callithrix_jacchus
ENSCHIG00000024413	MTREX	100	98.752	ENSCAFG00000006818	MTREX	100	98.752	Canis_familiaris
ENSCHIG00000024413	MTREX	100	98.752	ENSCAFG00020024352	MTREX	100	98.752	Canis_lupus_dingo
ENSCHIG00000024413	MTREX	94	98.025	ENSTSYG00000007389	MTREX	100	98.025	Carlito_syrichta
ENSCHIG00000024413	MTREX	95	73.769	ENSCAPG00000008696	MTREX	99	73.769	Cavia_aperea
ENSCHIG00000024413	MTREX	100	98.177	ENSCPOG00000009797	MTREX	100	98.177	Cavia_porcellus
ENSCHIG00000024413	MTREX	100	98.464	ENSCCAG00000014177	MTREX	100	98.464	Cebus_capucinus
ENSCHIG00000024413	MTREX	100	98.273	ENSCATG00000042153	MTREX	100	98.273	Cercocebus_atys
ENSCHIG00000024413	MTREX	100	97.793	ENSCLAG00000006622	MTREX	100	97.793	Chinchilla_lanigera
ENSCHIG00000024413	MTREX	100	93.780	ENSCSAG00000016445	MTREX	100	93.780	Chlorocebus_sabaeus
ENSCHIG00000024413	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSCHIG00000024413	MTREX	100	91.659	ENSCPBG00000026551	MTREX	94	92.330	Chrysemys_picta_bellii
ENSCHIG00000024413	MTREX	99	66.444	ENSCING00000003239	-	99	66.348	Ciona_intestinalis
ENSCHIG00000024413	MTREX	99	65.553	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSCHIG00000024413	MTREX	100	98.177	ENSCANG00000035770	MTREX	100	98.177	Colobus_angolensis_palliatus
ENSCHIG00000024413	MTREX	100	97.313	ENSCGRG00001024680	Mtrex	100	97.313	Cricetulus_griseus_chok1gshd
ENSCHIG00000024413	MTREX	100	97.313	ENSCGRG00000000307	Mtrex	100	97.313	Cricetulus_griseus_crigri
ENSCHIG00000024413	MTREX	100	82.044	ENSCSEG00000018621	mtrex	98	82.044	Cynoglossus_semilaevis
ENSCHIG00000024413	MTREX	100	83.460	ENSCVAG00000004556	mtrex	100	83.619	Cyprinodon_variegatus
ENSCHIG00000024413	MTREX	100	84.843	ENSDARG00000013457	mtrex	100	84.652	Danio_rerio
ENSCHIG00000024413	MTREX	100	96.845	ENSDNOG00000015375	MTREX	100	96.558	Dasypus_novemcinctus
ENSCHIG00000024413	MTREX	100	97.697	ENSDORG00000006782	Mtrex	100	97.697	Dipodomys_ordii
ENSCHIG00000024413	MTREX	99	62.287	FBgn0001986	Mtr4	93	65.261	Drosophila_melanogaster
ENSCHIG00000024413	MTREX	84	100.000	ENSETEG00000000727	MTREX	83	100.000	Echinops_telfairi
ENSCHIG00000024413	MTREX	99	74.398	ENSEBUG00000012869	mtrex	99	74.398	Eptatretus_burgeri
ENSCHIG00000024413	MTREX	100	98.308	ENSEASG00005013270	MTREX	100	98.308	Equus_asinus_asinus
ENSCHIG00000024413	MTREX	100	98.408	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSCHIG00000024413	MTREX	98	88.683	ENSEEUG00000000527	MTREX	100	88.683	Erinaceus_europaeus
ENSCHIG00000024413	MTREX	98	84.869	ENSELUG00000004898	mtrex	100	89.391	Esox_lucius
ENSCHIG00000024413	MTREX	100	98.656	ENSFCAG00000010575	MTREX	100	98.656	Felis_catus
ENSCHIG00000024413	MTREX	100	89.731	ENSFALG00000010850	MTREX	100	89.635	Ficedula_albicollis
ENSCHIG00000024413	MTREX	100	97.121	ENSFDAG00000011199	MTREX	100	97.121	Fukomys_damarensis
ENSCHIG00000024413	MTREX	100	83.508	ENSFHEG00000023014	mtrex	100	82.510	Fundulus_heteroclitus
ENSCHIG00000024413	MTREX	100	79.294	ENSGMOG00000014702	mtrex	100	79.658	Gadus_morhua
ENSCHIG00000024413	MTREX	100	91.075	ENSGALG00000014709	MTREX	86	90.979	Gallus_gallus
ENSCHIG00000024413	MTREX	100	83.508	ENSGAFG00000012425	mtrex	98	87.293	Gambusia_affinis
ENSCHIG00000024413	MTREX	100	79.163	ENSGACG00000016260	mtrex	96	85.109	Gasterosteus_aculeatus
ENSCHIG00000024413	MTREX	100	91.659	ENSGAGG00000020036	MTREX	100	91.659	Gopherus_agassizii
ENSCHIG00000024413	MTREX	100	98.560	ENSGGOG00000001867	MTREX	100	98.560	Gorilla_gorilla
ENSCHIG00000024413	MTREX	100	82.493	ENSHBUG00000006229	mtrex	100	82.588	Haplochromis_burtoni
ENSCHIG00000024413	MTREX	100	97.697	ENSHGLG00000019445	SKIV2L2	100	97.697	Heterocephalus_glaber_female
ENSCHIG00000024413	MTREX	100	97.697	ENSHGLG00100011833	SKIV2L2	100	97.697	Heterocephalus_glaber_male
ENSCHIG00000024413	MTREX	91	84.623	ENSHCOG00000019995	mtrex	100	84.623	Hippocampus_comes
ENSCHIG00000024413	MTREX	100	85.291	ENSIPUG00000024348	skiv2l2	100	85.019	Ictalurus_punctatus
ENSCHIG00000024413	MTREX	100	98.177	ENSSTOG00000010802	MTREX	100	98.177	Ictidomys_tridecemlineatus
ENSCHIG00000024413	MTREX	100	90.691	ENSJJAG00000020975	Mtrex	100	90.691	Jaculus_jaculus
ENSCHIG00000024413	MTREX	100	83.031	ENSKMAG00000012642	mtrex	100	82.841	Kryptolebias_marmoratus
ENSCHIG00000024413	MTREX	100	83.064	ENSLBEG00000019367	mtrex	99	86.131	Labrus_bergylta
ENSCHIG00000024413	MTREX	100	88.399	ENSLACG00000009075	MTREX	100	88.157	Latimeria_chalumnae
ENSCHIG00000024413	MTREX	100	86.877	ENSLOCG00000010186	mtrex	100	86.590	Lepisosteus_oculatus
ENSCHIG00000024413	MTREX	99	95.777	ENSLAFG00000010497	MTREX	100	95.777	Loxodonta_africana
ENSCHIG00000024413	MTREX	100	98.273	ENSMFAG00000031610	MTREX	100	98.273	Macaca_fascicularis
ENSCHIG00000024413	MTREX	100	96.839	ENSMMUG00000010379	MTREX	100	96.839	Macaca_mulatta
ENSCHIG00000024413	MTREX	100	98.273	ENSMNEG00000032746	MTREX	100	98.273	Macaca_nemestrina
ENSCHIG00000024413	MTREX	100	98.273	ENSMLEG00000041051	MTREX	100	98.273	Mandrillus_leucophaeus
ENSCHIG00000024413	MTREX	100	82.713	ENSMAMG00000016753	mtrex	96	88.309	Mastacembelus_armatus
ENSCHIG00000024413	MTREX	100	82.493	ENSMZEG00005000414	mtrex	100	82.588	Maylandia_zebra
ENSCHIG00000024413	MTREX	94	67.341	ENSMGAG00000003980	MTREX	100	67.341	Meleagris_gallopavo
ENSCHIG00000024413	MTREX	100	97.409	ENSMAUG00000010727	Mtrex	100	97.409	Mesocricetus_auratus
ENSCHIG00000024413	MTREX	100	98.848	ENSMICG00000012779	MTREX	100	98.848	Microcebus_murinus
ENSCHIG00000024413	MTREX	100	97.409	ENSMOCG00000019886	Mtrex	100	97.409	Microtus_ochrogaster
ENSCHIG00000024413	MTREX	100	81.489	ENSMMOG00000002476	mtrex	100	81.489	Mola_mola
ENSCHIG00000024413	MTREX	100	93.282	ENSMODG00000019494	MTREX	100	93.397	Monodelphis_domestica
ENSCHIG00000024413	MTREX	92	82.497	ENSMALG00000002917	mtrex	99	82.497	Monopterus_albus
ENSCHIG00000024413	MTREX	100	96.929	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	Mus_caroli
ENSCHIG00000024413	MTREX	100	97.121	ENSMUSG00000016018	Mtrex	100	97.121	Mus_musculus
ENSCHIG00000024413	MTREX	100	97.025	MGP_PahariEiJ_G0015967	Mtrex	100	97.025	Mus_pahari
ENSCHIG00000024413	MTREX	100	97.121	MGP_SPRETEiJ_G0019775	Mtrex	100	97.121	Mus_spretus
ENSCHIG00000024413	MTREX	100	99.040	ENSMPUG00000007619	MTREX	100	99.040	Mustela_putorius_furo
ENSCHIG00000024413	MTREX	100	97.033	ENSMLUG00000001152	MTREX	100	97.033	Myotis_lucifugus
ENSCHIG00000024413	MTREX	100	97.985	ENSNGAG00000011938	Mtrex	100	97.985	Nannospalax_galili
ENSCHIG00000024413	MTREX	100	82.588	ENSNBRG00000011293	mtrex	100	82.683	Neolamprologus_brichardi
ENSCHIG00000024413	MTREX	100	94.444	ENSNLEG00000001494	MTREX	100	94.444	Nomascus_leucogenys
ENSCHIG00000024413	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSCHIG00000024413	MTREX	100	81.862	ENSOPRG00000008009	MTREX	100	82.438	Ochotona_princeps
ENSCHIG00000024413	MTREX	100	97.313	ENSODEG00000017234	MTREX	100	97.313	Octodon_degus
ENSCHIG00000024413	MTREX	100	82.398	ENSONIG00000007587	mtrex	100	82.493	Oreochromis_niloticus
ENSCHIG00000024413	MTREX	100	98.369	ENSOCUG00000004463	MTREX	100	98.369	Oryctolagus_cuniculus
ENSCHIG00000024413	MTREX	100	82.555	ENSORLG00000005443	mtrex	100	82.459	Oryzias_latipes
ENSCHIG00000024413	MTREX	100	82.459	ENSORLG00020006329	mtrex	100	82.364	Oryzias_latipes_hni
ENSCHIG00000024413	MTREX	100	82.146	ENSORLG00015012924	mtrex	100	82.269	Oryzias_latipes_hsok
ENSCHIG00000024413	MTREX	100	81.749	ENSOMEG00000008825	mtrex	100	81.749	Oryzias_melastigma
ENSCHIG00000024413	MTREX	100	98.369	ENSOGAG00000002886	MTREX	100	98.369	Otolemur_garnettii
ENSCHIG00000024413	MTREX	100	99.713	ENSOARG00000007764	MTREX	100	99.713	Ovis_aries
ENSCHIG00000024413	MTREX	100	98.560	ENSPPAG00000039291	MTREX	100	98.560	Pan_paniscus
ENSCHIG00000024413	MTREX	100	98.656	ENSPPRG00000019701	MTREX	100	98.656	Panthera_pardus
ENSCHIG00000024413	MTREX	100	97.121	ENSPTIG00000009313	MTREX	100	97.121	Panthera_tigris_altaica
ENSCHIG00000024413	MTREX	100	98.560	ENSPTRG00000016878	MTREX	100	98.560	Pan_troglodytes
ENSCHIG00000024413	MTREX	100	98.177	ENSPANG00000009697	MTREX	100	98.177	Papio_anubis
ENSCHIG00000024413	MTREX	100	86.724	ENSPKIG00000020833	mtrex	99	87.894	Paramormyrops_kingsleyae
ENSCHIG00000024413	MTREX	100	91.467	ENSPSIG00000012150	MTREX	100	92.138	Pelodiscus_sinensis
ENSCHIG00000024413	MTREX	100	81.125	ENSPMGG00000002582	mtrex	100	81.125	Periophthalmus_magnuspinnatus
ENSCHIG00000024413	MTREX	95	65.396	ENSPMAG00000009668	mtrex	100	65.396	Petromyzon_marinus
ENSCHIG00000024413	MTREX	91	96.515	ENSPCIG00000024730	MTREX	100	96.515	Phascolarctos_cinereus
ENSCHIG00000024413	MTREX	75	87.072	ENSPFOG00000003141	mtrex	100	87.310	Poecilia_formosa
ENSCHIG00000024413	MTREX	100	83.413	ENSPLAG00000021311	mtrex	100	83.603	Poecilia_latipinna
ENSCHIG00000024413	MTREX	91	87.408	ENSPMEG00000010597	mtrex	99	87.723	Poecilia_mexicana
ENSCHIG00000024413	MTREX	100	83.222	ENSPREG00000003089	mtrex	100	83.317	Poecilia_reticulata
ENSCHIG00000024413	MTREX	98	98.537	ENSPPYG00000015469	MTREX	98	98.537	Pongo_abelii
ENSCHIG00000024413	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSCHIG00000024413	MTREX	99	92.534	ENSPCOG00000018092	MTREX	100	97.523	Propithecus_coquereli
ENSCHIG00000024413	MTREX	100	98.752	ENSPVAG00000002445	MTREX	100	98.752	Pteropus_vampyrus
ENSCHIG00000024413	MTREX	100	82.398	ENSPNYG00000006164	mtrex	100	82.493	Pundamilia_nyererei
ENSCHIG00000024413	MTREX	100	85.960	ENSPNAG00000008794	mtrex	100	86.055	Pygocentrus_nattereri
ENSCHIG00000024413	MTREX	99	96.793	ENSRNOG00000010125	Mtrex	97	96.793	Rattus_norvegicus
ENSCHIG00000024413	MTREX	100	96.545	ENSRBIG00000034930	MTREX	100	96.545	Rhinopithecus_bieti
ENSCHIG00000024413	MTREX	100	98.273	ENSRROG00000039895	MTREX	100	98.273	Rhinopithecus_roxellana
ENSCHIG00000024413	MTREX	89	55.346	YJL050W	MTR4	89	55.346	Saccharomyces_cerevisiae
ENSCHIG00000024413	MTREX	100	98.369	ENSSBOG00000026693	MTREX	100	98.369	Saimiri_boliviensis_boliviensis
ENSCHIG00000024413	MTREX	95	95.473	ENSSHAG00000004600	MTREX	99	95.473	Sarcophilus_harrisii
ENSCHIG00000024413	MTREX	100	87.380	ENSSFOG00015014355	skiv2l2	100	87.285	Scleropages_formosus
ENSCHIG00000024413	MTREX	100	82.841	ENSSMAG00000007572	mtrex	100	82.841	Scophthalmus_maximus
ENSCHIG00000024413	MTREX	100	83.683	ENSSDUG00000023789	mtrex	100	83.683	Seriola_dumerili
ENSCHIG00000024413	MTREX	100	83.429	ENSSLDG00000006301	mtrex	100	83.429	Seriola_lalandi_dorsalis
ENSCHIG00000024413	MTREX	100	94.434	ENSSARG00000008387	MTREX	100	94.434	Sorex_araneus
ENSCHIG00000024413	MTREX	100	79.674	ENSSPUG00000007071	MTREX	100	79.809	Sphenodon_punctatus
ENSCHIG00000024413	MTREX	91	87.303	ENSSPAG00000011319	mtrex	94	87.723	Stegastes_partitus
ENSCHIG00000024413	MTREX	100	99.040	ENSSSCG00000016911	MTREX	100	99.040	Sus_scrofa
ENSCHIG00000024413	MTREX	100	89.453	ENSTGUG00000002480	MTREX	100	89.251	Taeniopygia_guttata
ENSCHIG00000024413	MTREX	100	82.857	ENSTRUG00000014571	mtrex	100	82.762	Takifugu_rubripes
ENSCHIG00000024413	MTREX	100	82.246	ENSTBEG00000007769	MTREX	100	82.246	Tupaia_belangeri
ENSCHIG00000024413	MTREX	100	98.944	ENSTTRG00000008678	MTREX	100	98.944	Tursiops_truncatus
ENSCHIG00000024413	MTREX	100	98.944	ENSUAMG00000023061	MTREX	100	98.944	Ursus_americanus
ENSCHIG00000024413	MTREX	100	98.180	ENSUMAG00000009373	MTREX	99	99.655	Ursus_maritimus
ENSCHIG00000024413	MTREX	100	87.716	ENSVPAG00000011174	MTREX	100	87.716	Vicugna_pacos
ENSCHIG00000024413	MTREX	100	98.944	ENSVVUG00000021337	MTREX	100	98.944	Vulpes_vulpes
ENSCHIG00000024413	MTREX	100	88.528	ENSXETG00000032798	MTREX	100	88.337	Xenopus_tropicalis
ENSCHIG00000024413	MTREX	100	83.222	ENSXMAG00000004799	mtrex	100	83.572	Xiphophorus_maculatus