EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000024547 (Gene tree)
Gene ID: 102183590
Gene Symbol: SAFB2
Alias: KIAA0138
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 28662 bases
Position: chr7:91812839-91841500
Accession: 102183590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000029432	RRM_1	PF00076.22	6.5e-14	1	1
ENSCHIP00000029416	RRM_1	PF00076.22	6.6e-14	1	1
ENSCHIP00000029432	SAP	PF02037.27	1.5e-10	1	1
ENSCHIP00000029416	SAP	PF02037.27	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000037302	SAFB2-202	2826	-	ENSCHIP00000029432	941 (aa)	-	UPI000D18D09F
ENSCHIT00000037286	SAFB2-201	3293	XM_018050906	ENSCHIP00000029416	942 (aa)	XP_017906395	UPI0005FB3639

Gene Model

Click here to download ENSCHIG00000024547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000024547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000024547	SAFB2	98	68.906	ENSCHIG00000007262	SAFB	100	63.836

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000024547	SAFB2	100	83.648	ENSG00000130254	SAFB2	100	83.648	Homo_sapiens
ENSCHIG00000024547	SAFB2	100	85.639	ENSAMEG00000012146	SAFB2	100	82.158	Ailuropoda_melanoleuca
ENSCHIG00000024547	SAFB2	100	84.172	ENSANAG00000031936	SAFB2	100	84.172	Aotus_nancymaae
ENSCHIG00000024547	SAFB2	100	97.679	ENSBTAG00000001790	SAFB2	100	97.679	Bos_taurus
ENSCHIG00000024547	SAFB2	100	88.050	ENSCAFG00000018814	SAFB2	100	88.050	Canis_familiaris
ENSCHIG00000024547	SAFB2	100	88.050	ENSCAFG00020018939	SAFB2	100	88.050	Canis_lupus_dingo
ENSCHIG00000024547	SAFB2	93	61.739	ENSCAPG00000011771	SAFB2	100	63.020	Cavia_aperea
ENSCHIG00000024547	SAFB2	100	73.571	ENSCPOG00000011394	SAFB2	100	73.469	Cavia_porcellus
ENSCHIG00000024547	SAFB2	100	83.824	ENSCCAG00000017348	SAFB2	100	83.824	Cebus_capucinus
ENSCHIG00000024547	SAFB2	100	82.791	ENSCATG00000039497	SAFB2	100	82.791	Cercocebus_atys
ENSCHIG00000024547	SAFB2	100	83.543	ENSCSAG00000009959	SAFB2	100	83.543	Chlorocebus_sabaeus
ENSCHIG00000024547	SAFB2	75	75.141	ENSCHOG00000010684	SAFB2	100	75.424	Choloepus_hoffmanni
ENSCHIG00000024547	SAFB2	100	80.378	ENSCANG00000024675	SAFB2	100	80.378	Colobus_angolensis_palliatus
ENSCHIG00000024547	SAFB2	100	66.431	ENSCGRG00001015833	Safb2	100	66.331	Cricetulus_griseus_chok1gshd
ENSCHIG00000024547	SAFB2	100	66.431	ENSCGRG00000011131	Safb2	100	66.331	Cricetulus_griseus_crigri
ENSCHIG00000024547	SAFB2	96	73.102	ENSDORG00000016199	Safb2	100	73.152	Dipodomys_ordii
ENSCHIG00000024547	SAFB2	87	82.746	ENSEASG00005022952	SAFB2	91	81.959	Equus_asinus_asinus
ENSCHIG00000024547	SAFB2	99	83.209	ENSECAG00000018978	SAFB2	100	84.035	Equus_caballus
ENSCHIG00000024547	SAFB2	100	87.093	ENSFCAG00000011834	SAFB2	100	87.303	Felis_catus
ENSCHIG00000024547	SAFB2	92	79.430	ENSFDAG00000020009	SAFB2	97	79.645	Fukomys_damarensis
ENSCHIG00000024547	SAFB2	100	80.312	ENSGGOG00000015093	SAFB2	100	78.646	Gorilla_gorilla
ENSCHIG00000024547	SAFB2	100	80.000	ENSHGLG00000017442	SAFB2	100	80.662	Heterocephalus_glaber_female
ENSCHIG00000024547	SAFB2	99	81.033	ENSLAFG00000003836	SAFB2	100	79.452	Loxodonta_africana
ENSCHIG00000024547	SAFB2	100	83.648	ENSMFAG00000039706	SAFB2	100	83.648	Macaca_fascicularis
ENSCHIG00000024547	SAFB2	100	83.962	ENSMMUG00000017968	SAFB2	100	83.962	Macaca_mulatta
ENSCHIG00000024547	SAFB2	100	77.975	ENSMNEG00000032042	SAFB2	100	77.755	Macaca_nemestrina
ENSCHIG00000024547	SAFB2	100	83.857	ENSMLEG00000034562	SAFB2	100	83.857	Mandrillus_leucophaeus
ENSCHIG00000024547	SAFB2	81	71.754	ENSMAUG00000011573	Safb2	94	71.579	Mesocricetus_auratus
ENSCHIG00000024547	SAFB2	99	84.706	ENSMICG00000008711	SAFB2	100	83.560	Microcebus_murinus
ENSCHIG00000024547	SAFB2	100	66.937	ENSMOCG00000006827	Safb2	100	66.937	Microtus_ochrogaster
ENSCHIG00000024547	SAFB2	98	70.896	ENSMODG00000001178	SAFB2	100	70.188	Monodelphis_domestica
ENSCHIG00000024547	SAFB2	99	66.734	MGP_CAROLIEiJ_G0021779	Safb2	99	65.524	Mus_caroli
ENSCHIG00000024547	SAFB2	99	67.104	ENSMUSG00000042625	Safb2	99	67.003	Mus_musculus
ENSCHIG00000024547	SAFB2	100	66.566	MGP_PahariEiJ_G0020768	Safb2	100	66.466	Mus_pahari
ENSCHIG00000024547	SAFB2	100	61.029	MGP_SPRETEiJ_G0022690	Safb2	100	59.706	Mus_spretus
ENSCHIG00000024547	SAFB2	100	86.765	ENSMPUG00000006106	SAFB2	93	86.765	Mustela_putorius_furo
ENSCHIG00000024547	SAFB2	100	82.848	ENSMLUG00000001050	SAFB2	100	80.187	Myotis_lucifugus
ENSCHIG00000024547	SAFB2	100	83.001	ENSNLEG00000013514	SAFB2	100	83.001	Nomascus_leucogenys
ENSCHIG00000024547	SAFB2	93	67.571	ENSMEUG00000002456	SAFB2	100	67.006	Notamacropus_eugenii
ENSCHIG00000024547	SAFB2	99	70.288	ENSOPRG00000011523	-	100	69.552	Ochotona_princeps
ENSCHIG00000024547	SAFB2	100	76.146	ENSODEG00000014751	SAFB2	100	76.146	Octodon_degus
ENSCHIG00000024547	SAFB2	100	81.571	ENSOGAG00000006855	SAFB2	100	80.564	Otolemur_garnettii
ENSCHIG00000024547	SAFB2	98	87.227	ENSOARG00000007982	SAFB2	67	98.706	Ovis_aries
ENSCHIG00000024547	SAFB2	100	83.857	ENSPPAG00000043392	SAFB2	100	83.857	Pan_paniscus
ENSCHIG00000024547	SAFB2	100	86.988	ENSPPRG00000011310	SAFB2	100	87.198	Panthera_pardus
ENSCHIG00000024547	SAFB2	81	90.036	ENSPTIG00000015120	SAFB2	90	90.036	Panthera_tigris_altaica
ENSCHIG00000024547	SAFB2	100	78.197	ENSPTRG00000010334	SAFB2	100	77.987	Pan_troglodytes
ENSCHIG00000024547	SAFB2	100	83.753	ENSPANG00000007004	SAFB2	100	83.753	Papio_anubis
ENSCHIG00000024547	SAFB2	100	64.665	ENSPEMG00000016015	Safb2	100	63.463	Peromyscus_maniculatus_bairdii
ENSCHIG00000024547	SAFB2	64	73.300	ENSPCIG00000009518	-	99	75.830	Phascolarctos_cinereus
ENSCHIG00000024547	SAFB2	100	84.277	ENSPPYG00000009427	SAFB2	100	84.277	Pongo_abelii
ENSCHIG00000024547	SAFB2	100	79.706	ENSPCAG00000006352	SAFB2	100	80.231	Procavia_capensis
ENSCHIG00000024547	SAFB2	100	80.336	ENSPCOG00000023260	SAFB2	100	78.909	Propithecus_coquereli
ENSCHIG00000024547	SAFB2	59	85.880	ENSPVAG00000004902	-	61	85.880	Pteropus_vampyrus
ENSCHIG00000024547	SAFB2	82	66.667	ENSRNOG00000049511	AABR07066522.1	99	64.835	Rattus_norvegicus
ENSCHIG00000024547	SAFB2	83	85.490	ENSRBIG00000033446	SAFB2	99	85.490	Rhinopithecus_bieti
ENSCHIG00000024547	SAFB2	100	83.857	ENSRROG00000006606	SAFB2	100	83.857	Rhinopithecus_roxellana
ENSCHIG00000024547	SAFB2	100	82.371	ENSSBOG00000032315	SAFB2	100	84.828	Saimiri_boliviensis_boliviensis
ENSCHIG00000024547	SAFB2	98	71.336	ENSSHAG00000012703	SAFB2	100	69.968	Sarcophilus_harrisii
ENSCHIG00000024547	SAFB2	80	75.694	ENSSARG00000000649	SAFB2	100	73.548	Sorex_araneus
ENSCHIG00000024547	SAFB2	100	90.356	ENSSSCG00000013523	SAFB2	100	90.147	Sus_scrofa
ENSCHIG00000024547	SAFB2	77	77.652	ENSTBEG00000012709	SAFB2	85	77.652	Tupaia_belangeri
ENSCHIG00000024547	SAFB2	93	85.135	ENSTTRG00000013585	SAFB2	93	84.797	Tursiops_truncatus
ENSCHIG00000024547	SAFB2	99	88.770	ENSUAMG00000024695	SAFB2	98	88.429	Ursus_americanus
ENSCHIG00000024547	SAFB2	84	90.361	ENSUMAG00000009585	SAFB2	88	90.361	Ursus_maritimus
ENSCHIG00000024547	SAFB2	75	87.435	ENSVPAG00000012041	SAFB2	88	87.432	Vicugna_pacos
ENSCHIG00000024547	SAFB2	100	88.155	ENSVVUG00000013695	SAFB2	100	88.155	Vulpes_vulpes