EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000024592 (Gene tree)
Gene ID: -
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: copine 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 2862 bases
Position: chr13:64443644-64446505
Accession: 102174316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000029462	RRM_1	PF00076.22	1.3e-30	1	3
ENSCHIP00000029462	RRM_1	PF00076.22	1.3e-30	2	3
ENSCHIP00000029462	RRM_1	PF00076.22	1.3e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000037332	RBM12-201	2766	XM_018057773	ENSCHIP00000029462	921 (aa)	XP_017913262	UPI000D195198

Gene Model

Click here to download ENSCHIG00000024592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000024592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000024592	RBM12	55	72.414	ENSCHIG00000006790	RBM12B	59	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000024592	RBM12	100	93.562	ENSG00000244462	RBM12	100	98.601	Homo_sapiens
ENSCHIG00000024592	RBM12	100	96.858	ENSAMEG00000019189	RBM12	100	96.858	Ailuropoda_melanoleuca
ENSCHIG00000024592	RBM12	100	77.586	ENSACAG00000006330	RBM12	98	77.371	Anolis_carolinensis
ENSCHIG00000024592	RBM12	83	95.059	ENSANAG00000032596	RBM12	98	94.952	Aotus_nancymaae
ENSCHIG00000024592	RBM12	100	96.537	ENSBTAG00000044015	RBM12	100	96.222	Bos_taurus
ENSCHIG00000024592	RBM12	100	96.641	ENSCAFG00000008256	RBM12	98	96.641	Canis_familiaris
ENSCHIG00000024592	RBM12	100	96.634	ENSCAFG00020005650	RBM12	100	96.634	Canis_lupus_dingo
ENSCHIG00000024592	RBM12	100	94.794	ENSTSYG00000030563	RBM12	98	94.794	Carlito_syrichta
ENSCHIG00000024592	RBM12	75	94.684	ENSCAPG00000006176	RBM12	79	94.684	Cavia_aperea
ENSCHIG00000024592	RBM12	100	81.500	ENSCPOG00000035170	RBM12	99	94.684	Cavia_porcellus
ENSCHIG00000024592	RBM12	100	76.356	ENSCCAG00000035899	-	100	74.865	Cebus_capucinus
ENSCHIG00000024592	RBM12	96	91.901	ENSCCAG00000036056	-	98	92.351	Cebus_capucinus
ENSCHIG00000024592	RBM12	100	93.455	ENSCATG00000030934	RBM12	98	94.206	Cercocebus_atys
ENSCHIG00000024592	RBM12	100	94.498	ENSCLAG00000017230	RBM12	100	94.067	Chinchilla_lanigera
ENSCHIG00000024592	RBM12	100	93.670	ENSCANG00000030552	RBM12	98	94.421	Colobus_angolensis_palliatus
ENSCHIG00000024592	RBM12	100	86.391	ENSCGRG00001021144	Rbm12	100	85.887	Cricetulus_griseus_chok1gshd
ENSCHIG00000024592	RBM12	100	86.391	ENSCGRG00000012719	Rbm12	100	85.887	Cricetulus_griseus_crigri
ENSCHIG00000024592	RBM12	100	92.743	ENSDORG00000028509	-	100	93.140	Dipodomys_ordii
ENSCHIG00000024592	RBM12	75	85.735	ENSDORG00000000606	-	100	81.616	Dipodomys_ordii
ENSCHIG00000024592	RBM12	55	85.870	ENSEBUG00000016806	rbm12	89	59.477	Eptatretus_burgeri
ENSCHIG00000024592	RBM12	100	95.797	ENSECAG00000021997	RBM12	100	95.797	Equus_caballus
ENSCHIG00000024592	RBM12	56	96.774	ENSEEUG00000008858	-	57	96.482	Erinaceus_europaeus
ENSCHIG00000024592	RBM12	100	94.606	ENSFDAG00000014663	RBM12	100	94.606	Fukomys_damarensis
ENSCHIG00000024592	RBM12	100	80.390	ENSGALG00000030253	RBM12	100	80.173	Gallus_gallus
ENSCHIG00000024592	RBM12	100	93.562	ENSGGOG00000028500	RBM12	98	94.313	Gorilla_gorilla
ENSCHIG00000024592	RBM12	100	93.219	ENSHGLG00000013208	RBM12	100	94.080	Heterocephalus_glaber_female
ENSCHIG00000024592	RBM12	91	97.179	ENSHGLG00100019158	RBM12	90	97.179	Heterocephalus_glaber_male
ENSCHIG00000024592	RBM12	100	90.095	ENSSTOG00000019739	RBM12	100	90.095	Ictidomys_tridecemlineatus
ENSCHIG00000024592	RBM12	100	73.812	ENSJJAG00000009879	-	100	75.323	Jaculus_jaculus
ENSCHIG00000024592	RBM12	100	57.614	ENSLOCG00000018363	rbm12	85	59.006	Lepisosteus_oculatus
ENSCHIG00000024592	RBM12	100	93.757	ENSLAFG00000010341	RBM12	100	94.187	Loxodonta_africana
ENSCHIG00000024592	RBM12	100	93.455	ENSMFAG00000032583	RBM12	98	94.206	Macaca_fascicularis
ENSCHIG00000024592	RBM12	100	93.851	ENSMMUG00000020960	CPNE1	100	94.606	Macaca_mulatta
ENSCHIG00000024592	RBM12	100	93.562	ENSMNEG00000045365	RBM12	98	94.313	Macaca_nemestrina
ENSCHIG00000024592	RBM12	100	93.562	ENSMLEG00000032492	RBM12	98	94.313	Mandrillus_leucophaeus
ENSCHIG00000024592	RBM12	100	78.440	ENSMGAG00000001502	RBM12	100	80.022	Meleagris_gallopavo
ENSCHIG00000024592	RBM12	100	80.382	ENSMAUG00000012800	Rbm12	100	86.794	Mesocricetus_auratus
ENSCHIG00000024592	RBM12	100	85.900	ENSMICG00000029540	-	100	85.033	Microcebus_murinus
ENSCHIG00000024592	RBM12	100	94.685	ENSMICG00000032761	-	98	94.794	Microcebus_murinus
ENSCHIG00000024592	RBM12	100	78.706	ENSMOCG00000012950	Rbm12	99	92.297	Microtus_ochrogaster
ENSCHIG00000024592	RBM12	100	86.009	ENSMODG00000001591	RBM12	98	85.792	Monodelphis_domestica
ENSCHIG00000024592	RBM12	75	93.074	MGP_CAROLIEiJ_G0024551	Rbm12	98	92.960	Mus_caroli
ENSCHIG00000024592	RBM12	100	86.016	ENSMUSG00000089824	Rbm12	100	80.943	Mus_musculus
ENSCHIG00000024592	RBM12	75	93.237	MGP_PahariEiJ_G0025996	Rbm12	100	80.811	Mus_pahari
ENSCHIG00000024592	RBM12	74	93.695	MGP_SPRETEiJ_G0025473	Rbm12	100	83.964	Mus_spretus
ENSCHIG00000024592	RBM12	100	94.924	ENSMPUG00000017789	-	100	95.558	Mustela_putorius_furo
ENSCHIG00000024592	RBM12	100	95.474	ENSMLUG00000011217	RBM12	98	95.474	Myotis_lucifugus
ENSCHIG00000024592	RBM12	100	80.382	ENSNGAG00000015846	Rbm12	71	93.295	Nannospalax_galili
ENSCHIG00000024592	RBM12	100	93.670	ENSNLEG00000010268	RBM12	98	94.421	Nomascus_leucogenys
ENSCHIG00000024592	RBM12	100	85.575	ENSMEUG00000007621	RBM12	100	85.358	Notamacropus_eugenii
ENSCHIG00000024592	RBM12	100	91.374	ENSOPRG00000005687	RBM12	100	91.587	Ochotona_princeps
ENSCHIG00000024592	RBM12	86	89.747	ENSODEG00000013870	RBM12	100	87.054	Octodon_degus
ENSCHIG00000024592	RBM12	100	93.562	ENSPPAG00000040719	RBM12	98	94.313	Pan_paniscus
ENSCHIG00000024592	RBM12	100	93.562	ENSPTRG00000013446	RBM12	98	94.313	Pan_troglodytes
ENSCHIG00000024592	RBM12	100	93.562	ENSPTRG00000040708	-	98	94.313	Pan_troglodytes
ENSCHIG00000024592	RBM12	100	93.562	ENSPANG00000020003	CPNE1	98	94.313	Papio_anubis
ENSCHIG00000024592	RBM12	89	86.667	ENSPSIG00000007369	RBM12	98	86.000	Pelodiscus_sinensis
ENSCHIG00000024592	RBM12	100	78.947	ENSPEMG00000017769	Rbm12	100	84.562	Peromyscus_maniculatus_bairdii
ENSCHIG00000024592	RBM12	60	78.571	ENSPFOG00000023551	rbm12	92	78.873	Poecilia_formosa
ENSCHIG00000024592	RBM12	100	93.576	ENSPPYG00000010960	RBM12	100	93.897	Pongo_abelii
ENSCHIG00000024592	RBM12	100	91.837	ENSPCAG00000008653	RBM12	100	92.026	Procavia_capensis
ENSCHIG00000024592	RBM12	100	95.356	ENSPCOG00000023724	RBM12	98	95.788	Propithecus_coquereli
ENSCHIG00000024592	RBM12	100	95.582	ENSPVAG00000014937	RBM12	100	95.582	Pteropus_vampyrus
ENSCHIG00000024592	RBM12	100	92.672	ENSRNOG00000049913	LOC100910990	97	92.672	Rattus_norvegicus
ENSCHIG00000024592	RBM12	100	92.672	ENSRNOG00000019723	Rbm12	97	92.672	Rattus_norvegicus
ENSCHIG00000024592	RBM12	100	93.777	ENSRBIG00000042965	RBM12	98	94.528	Rhinopithecus_bieti
ENSCHIG00000024592	RBM12	100	93.777	ENSRROG00000037485	RBM12	98	94.528	Rhinopithecus_roxellana
ENSCHIG00000024592	RBM12	83	94.928	ENSSBOG00000027633	RBM12	98	94.844	Saimiri_boliviensis_boliviensis
ENSCHIG00000024592	RBM12	100	86.226	ENSSHAG00000018585	RBM12	100	86.009	Sarcophilus_harrisii
ENSCHIG00000024592	RBM12	100	95.606	ENSSSCG00000036156	RBM12	100	95.606	Sus_scrofa
ENSCHIG00000024592	RBM12	100	80.369	ENSTGUG00000003002	RBM12	100	79.718	Taeniopygia_guttata
ENSCHIG00000024592	RBM12	100	96.228	ENSTTRG00000017035	RBM12	100	96.228	Tursiops_truncatus
ENSCHIG00000024592	RBM12	100	96.328	ENSUAMG00000010430	RBM12	100	96.328	Ursus_americanus
ENSCHIG00000024592	RBM12	91	100.000	ENSVPAG00000003812	RBM12	91	100.000	Vicugna_pacos
ENSCHIG00000024592	RBM12	100	60.809	ENSXETG00000033541	RBM12	100	59.937	Xenopus_tropicalis