EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000024648 (Gene tree)
Gene ID: 102171069
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 19184 bases
Position: chr8:102220958-102240141
Accession: 102171069
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000029610	PRP4	PF08799.11	5.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000037480	-	1569	XM_005684320	ENSCHIP00000029610	522 (aa)	XP_005684377	UPI0003AF3598

Gene Model

Click here to download ENSCHIG00000024648's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000024648's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000024648	-	56	33.898	ENSCHIG00000026402	POC1B	63	33.898
ENSCHIG00000024648	-	56	30.625	ENSCHIG00000015357	WDR5B	90	30.625
ENSCHIG00000024648	-	56	32.653	ENSCHIG00000007747	TBL3	65	32.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000024648	-	100	99.042	ENSG00000136875	PRPF4	100	99.042	Homo_sapiens
ENSCHIG00000024648	-	96	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSCHIG00000024648	-	100	99.042	ENSAMEG00000013048	PRPF4	98	99.042	Ailuropoda_melanoleuca
ENSCHIG00000024648	-	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSCHIG00000024648	-	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSCHIG00000024648	-	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSCHIG00000024648	-	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSCHIG00000024648	-	98	90.448	ENSAPLG00000006534	PRPF4	96	90.448	Anas_platyrhynchos
ENSCHIG00000024648	-	100	89.504	ENSACAG00000015110	PRPF4	100	89.504	Anolis_carolinensis
ENSCHIG00000024648	-	100	99.234	ENSANAG00000022464	PRPF4	96	99.234	Aotus_nancymaae
ENSCHIG00000024648	-	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSCHIG00000024648	-	97	62.188	ENSAMXG00000006756	prpf4	99	73.267	Astyanax_mexicanus
ENSCHIG00000024648	-	100	99.042	ENSBTAG00000004571	PRPF4	100	99.042	Bos_taurus
ENSCHIG00000024648	-	90	44.304	WBGene00007972	prp-4	96	44.211	Caenorhabditis_elegans
ENSCHIG00000024648	-	100	99.425	ENSCJAG00000017856	PRPF4	100	99.425	Callithrix_jacchus
ENSCHIG00000024648	-	100	99.042	ENSCAFG00000003224	PRPF4	97	99.042	Canis_familiaris
ENSCHIG00000024648	-	100	99.042	ENSCAFG00020022637	PRPF4	100	99.042	Canis_lupus_dingo
ENSCHIG00000024648	-	100	99.234	ENSTSYG00000010366	PRPF4	100	99.234	Carlito_syrichta
ENSCHIG00000024648	-	88	88.783	ENSCAPG00000008935	PRPF4	97	88.783	Cavia_aperea
ENSCHIG00000024648	-	100	98.851	ENSCPOG00000010747	-	100	98.851	Cavia_porcellus
ENSCHIG00000024648	-	100	92.337	ENSCPOG00000014729	-	100	92.337	Cavia_porcellus
ENSCHIG00000024648	-	100	99.042	ENSCCAG00000028990	PRPF4	100	99.042	Cebus_capucinus
ENSCHIG00000024648	-	100	99.042	ENSCATG00000021552	PRPF4	100	99.042	Cercocebus_atys
ENSCHIG00000024648	-	100	99.042	ENSCLAG00000013448	PRPF4	100	99.042	Chinchilla_lanigera
ENSCHIG00000024648	-	87	95.575	ENSCHOG00000007233	PRPF4	100	95.575	Choloepus_hoffmanni
ENSCHIG00000024648	-	99	91.456	ENSCPBG00000019136	PRPF4	74	91.456	Chrysemys_picta_bellii
ENSCHIG00000024648	-	96	59.252	ENSCING00000001299	-	97	58.614	Ciona_intestinalis
ENSCHIG00000024648	-	96	57.540	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSCHIG00000024648	-	100	99.234	ENSCANG00000003246	PRPF4	100	99.234	Colobus_angolensis_palliatus
ENSCHIG00000024648	-	100	98.851	ENSCGRG00001016992	Prpf4	100	98.851	Cricetulus_griseus_chok1gshd
ENSCHIG00000024648	-	100	98.851	ENSCGRG00000017560	Prpf4	100	98.851	Cricetulus_griseus_crigri
ENSCHIG00000024648	-	97	75.644	ENSCSEG00000020451	prpf4	99	75.644	Cynoglossus_semilaevis
ENSCHIG00000024648	-	97	79.604	ENSDARG00000067639	prpf4	99	79.604	Danio_rerio
ENSCHIG00000024648	-	100	97.893	ENSDNOG00000013203	PRPF4	100	97.893	Dasypus_novemcinctus
ENSCHIG00000024648	-	100	98.851	ENSDORG00000026275	Prpf4	100	98.851	Dipodomys_ordii
ENSCHIG00000024648	-	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSCHIG00000024648	-	100	97.706	ENSETEG00000020389	PRPF4	100	97.706	Echinops_telfairi
ENSCHIG00000024648	-	95	73.041	ENSEBUG00000015229	prpf4	86	73.502	Eptatretus_burgeri
ENSCHIG00000024648	-	100	99.234	ENSEASG00005022678	PRPF4	100	99.234	Equus_asinus_asinus
ENSCHIG00000024648	-	100	99.234	ENSECAG00000007072	PRPF4	100	99.234	Equus_caballus
ENSCHIG00000024648	-	100	78.603	ENSEEUG00000007480	PRPF4	100	78.603	Erinaceus_europaeus
ENSCHIG00000024648	-	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSCHIG00000024648	-	100	99.425	ENSFCAG00000005514	PRPF4	100	99.425	Felis_catus
ENSCHIG00000024648	-	98	88.341	ENSFALG00000005423	PRPF4	88	86.842	Ficedula_albicollis
ENSCHIG00000024648	-	100	98.851	ENSFDAG00000005839	PRPF4	100	98.851	Fukomys_damarensis
ENSCHIG00000024648	-	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSCHIG00000024648	-	98	90.215	ENSGALG00000008857	PRPF4	96	89.362	Gallus_gallus
ENSCHIG00000024648	-	65	70.588	ENSGAFG00000012164	prpf4	70	70.588	Gambusia_affinis
ENSCHIG00000024648	-	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSCHIG00000024648	-	99	91.262	ENSGAGG00000025029	PRPF4	95	91.262	Gopherus_agassizii
ENSCHIG00000024648	-	100	98.851	ENSGGOG00000006943	PRPF4	100	98.851	Gorilla_gorilla
ENSCHIG00000024648	-	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSCHIG00000024648	-	100	80.268	ENSHGLG00000003838	-	100	80.268	Heterocephalus_glaber_female
ENSCHIG00000024648	-	100	98.851	ENSHGLG00000015191	PRPF4	100	98.851	Heterocephalus_glaber_female
ENSCHIG00000024648	-	100	81.679	ENSHGLG00000016628	-	100	82.443	Heterocephalus_glaber_female
ENSCHIG00000024648	-	100	80.268	ENSHGLG00100005571	-	100	80.268	Heterocephalus_glaber_male
ENSCHIG00000024648	-	97	78.614	ENSIPUG00000017956	PRPF4	99	78.614	Ictalurus_punctatus
ENSCHIG00000024648	-	100	98.659	ENSSTOG00000027833	PRPF4	100	98.659	Ictidomys_tridecemlineatus
ENSCHIG00000024648	-	100	99.234	ENSJJAG00000008838	Prpf4	100	99.234	Jaculus_jaculus
ENSCHIG00000024648	-	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSCHIG00000024648	-	96	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSCHIG00000024648	-	98	81.445	ENSLACG00000016317	PRPF4	98	81.445	Latimeria_chalumnae
ENSCHIG00000024648	-	97	81.584	ENSLOCG00000000581	prpf4	99	81.584	Lepisosteus_oculatus
ENSCHIG00000024648	-	100	98.276	ENSLAFG00000018225	PRPF4	100	98.276	Loxodonta_africana
ENSCHIG00000024648	-	100	98.851	ENSMFAG00000039397	PRPF4	100	98.851	Macaca_fascicularis
ENSCHIG00000024648	-	100	99.042	ENSMMUG00000005844	PRPF4	100	99.042	Macaca_mulatta
ENSCHIG00000024648	-	100	88.123	ENSMNEG00000033737	PRPF4	100	88.506	Macaca_nemestrina
ENSCHIG00000024648	-	100	99.042	ENSMLEG00000040284	PRPF4	100	99.042	Mandrillus_leucophaeus
ENSCHIG00000024648	-	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSCHIG00000024648	-	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSCHIG00000024648	-	99	88.054	ENSMGAG00000001796	PRPF4	97	88.054	Meleagris_gallopavo
ENSCHIG00000024648	-	100	98.276	ENSMAUG00000018022	Prpf4	100	98.276	Mesocricetus_auratus
ENSCHIG00000024648	-	100	98.276	ENSMICG00000015022	PRPF4	100	98.276	Microcebus_murinus
ENSCHIG00000024648	-	100	98.276	ENSMOCG00000018273	Prpf4	100	98.276	Microtus_ochrogaster
ENSCHIG00000024648	-	97	74.653	ENSMMOG00000021177	prpf4	99	74.653	Mola_mola
ENSCHIG00000024648	-	100	94.847	ENSMODG00000004444	-	100	94.847	Monodelphis_domestica
ENSCHIG00000024648	-	100	94.646	ENSMODG00000025096	-	97	94.646	Monodelphis_domestica
ENSCHIG00000024648	-	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSCHIG00000024648	-	100	98.659	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.659	Mus_caroli
ENSCHIG00000024648	-	100	98.659	ENSMUSG00000066148	Prpf4	100	98.659	Mus_musculus
ENSCHIG00000024648	-	100	98.467	MGP_PahariEiJ_G0028413	Prpf4	100	98.467	Mus_pahari
ENSCHIG00000024648	-	100	98.659	MGP_SPRETEiJ_G0027042	Prpf4	100	98.659	Mus_spretus
ENSCHIG00000024648	-	100	99.042	ENSMPUG00000007883	PRPF4	100	99.042	Mustela_putorius_furo
ENSCHIG00000024648	-	100	96.743	ENSMLUG00000008626	-	97	96.743	Myotis_lucifugus
ENSCHIG00000024648	-	100	98.659	ENSMLUG00000015309	-	97	98.659	Myotis_lucifugus
ENSCHIG00000024648	-	100	93.487	ENSNGAG00000000468	Prpf4	100	93.487	Nannospalax_galili
ENSCHIG00000024648	-	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSCHIG00000024648	-	100	99.234	ENSNLEG00000016647	PRPF4	100	99.234	Nomascus_leucogenys
ENSCHIG00000024648	-	98	95.303	ENSMEUG00000013256	PRPF4	100	95.331	Notamacropus_eugenii
ENSCHIG00000024648	-	100	98.659	ENSOPRG00000005302	PRPF4	100	98.659	Ochotona_princeps
ENSCHIG00000024648	-	100	99.234	ENSODEG00000018147	PRPF4	100	99.234	Octodon_degus
ENSCHIG00000024648	-	99	75.096	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSCHIG00000024648	-	100	99.042	ENSOCUG00000005046	PRPF4	100	99.042	Oryctolagus_cuniculus
ENSCHIG00000024648	-	96	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSCHIG00000024648	-	96	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSCHIG00000024648	-	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSCHIG00000024648	-	100	93.870	ENSOGAG00000007802	PRPF4	98	93.870	Otolemur_garnettii
ENSCHIG00000024648	-	100	99.808	ENSOARG00000006319	PRPF4	97	99.808	Ovis_aries
ENSCHIG00000024648	-	100	98.851	ENSPPAG00000041797	PRPF4	100	98.851	Pan_paniscus
ENSCHIG00000024648	-	100	99.234	ENSPPRG00000014360	PRPF4	100	99.234	Panthera_pardus
ENSCHIG00000024648	-	100	99.234	ENSPTIG00000009574	PRPF4	100	99.234	Panthera_tigris_altaica
ENSCHIG00000024648	-	100	99.042	ENSPTRG00000021274	PRPF4	100	99.042	Pan_troglodytes
ENSCHIG00000024648	-	100	99.042	ENSPANG00000025776	PRPF4	96	99.042	Papio_anubis
ENSCHIG00000024648	-	97	80.990	ENSPKIG00000017259	prpf4	99	80.990	Paramormyrops_kingsleyae
ENSCHIG00000024648	-	98	91.051	ENSPSIG00000010713	PRPF4	90	91.051	Pelodiscus_sinensis
ENSCHIG00000024648	-	99	58.165	ENSPMGG00000000997	prpf4	99	58.165	Periophthalmus_magnuspinnatus
ENSCHIG00000024648	-	100	98.851	ENSPEMG00000024115	Prpf4	100	98.851	Peromyscus_maniculatus_bairdii
ENSCHIG00000024648	-	98	95.303	ENSPCIG00000003821	PRPF4	99	95.331	Phascolarctos_cinereus
ENSCHIG00000024648	-	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSCHIG00000024648	-	64	69.822	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSCHIG00000024648	-	91	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSCHIG00000024648	-	98	99.027	ENSPCAG00000002561	PRPF4	100	99.027	Procavia_capensis
ENSCHIG00000024648	-	100	98.659	ENSPCOG00000011975	PRPF4	100	98.659	Propithecus_coquereli
ENSCHIG00000024648	-	100	95.402	ENSPVAG00000004708	PRPF4	100	95.402	Pteropus_vampyrus
ENSCHIG00000024648	-	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSCHIG00000024648	-	97	80.198	ENSPNAG00000000697	prpf4	99	80.198	Pygocentrus_nattereri
ENSCHIG00000024648	-	100	98.851	ENSRNOG00000014777	Prpf4	100	98.851	Rattus_norvegicus
ENSCHIG00000024648	-	100	99.234	ENSRBIG00000040221	PRPF4	100	99.234	Rhinopithecus_bieti
ENSCHIG00000024648	-	100	99.234	ENSRROG00000040240	PRPF4	100	99.234	Rhinopithecus_roxellana
ENSCHIG00000024648	-	100	95.038	ENSSHAG00000017658	PRPF4	100	95.038	Sarcophilus_harrisii
ENSCHIG00000024648	-	97	81.782	ENSSFOG00015008963	prpf4	99	81.782	Scleropages_formosus
ENSCHIG00000024648	-	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSCHIG00000024648	-	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSCHIG00000024648	-	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSCHIG00000024648	-	100	90.038	ENSSPUG00000015582	PRPF4	100	90.038	Sphenodon_punctatus
ENSCHIG00000024648	-	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSCHIG00000024648	-	100	99.234	ENSSSCG00000024648	PRPF4	100	99.234	Sus_scrofa
ENSCHIG00000024648	-	94	90.798	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSCHIG00000024648	-	97	75.296	ENSTRUG00000008853	prpf4	99	75.296	Takifugu_rubripes
ENSCHIG00000024648	-	97	74.653	ENSTNIG00000013250	prpf4	99	74.653	Tetraodon_nigroviridis
ENSCHIG00000024648	-	100	90.613	ENSTBEG00000000821	PRPF4	100	90.613	Tupaia_belangeri
ENSCHIG00000024648	-	82	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSCHIG00000024648	-	64	95.821	ENSUAMG00000018288	PRPF4	90	95.821	Ursus_americanus
ENSCHIG00000024648	-	100	98.467	ENSUMAG00000019375	PRPF4	100	98.467	Ursus_maritimus
ENSCHIG00000024648	-	100	98.851	ENSVPAG00000005281	PRPF4	100	98.851	Vicugna_pacos
ENSCHIG00000024648	-	100	97.909	ENSVVUG00000002476	PRPF4	100	98.028	Vulpes_vulpes
ENSCHIG00000024648	-	69	58.333	ENSXCOG00000006101	prpf4	93	59.360	Xiphophorus_couchianus
ENSCHIG00000024648	-	87	64.629	ENSXMAG00000002750	prpf4	98	65.408	Xiphophorus_maculatus