EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000024795 (Gene tree)
Gene ID: 102182187
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 20741 bases
Position: chr25:25918204-25938944
Accession: 102182187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000029912	eIF-3c_N	PF05470.12	1e-272	1	1
ENSCHIP00000029942	eIF-3c_N	PF05470.12	2.6e-259	1	2
ENSCHIP00000029942	eIF-3c_N	PF05470.12	2.6e-259	2	2
ENSCHIP00000029929	eIF-3c_N	PF05470.12	8.7e-259	1	1
ENSCHIP00000029936	eIF-3c_N	PF05470.12	1.3e-256	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000037812	-	2700	-	ENSCHIP00000029942	899 (aa)	-	UPI000D18E7C2
ENSCHIT00000037806	-	2706	-	ENSCHIP00000029936	901 (aa)	-	UPI000D193B75
ENSCHIT00000037798	-	2730	-	ENSCHIP00000029929	909 (aa)	-	UPI000D1968FF
ENSCHIT00000037782	-	3694	XM_005697651	ENSCHIP00000029912	912 (aa)	XP_005697708	UPI00029D771D

Gene Model

Click here to download ENSCHIG00000024795's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000024795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000024795	-	100	97.919	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSCHIG00000024795	-	100	97.812	ENSG00000205609	EIF3CL	100	97.812	Homo_sapiens
ENSCHIG00000024795	-	99	76.496	ENSAPOG00000024092	eif3c	99	79.850	Acanthochromis_polyacanthus
ENSCHIG00000024795	-	100	98.795	ENSAMEG00000015454	-	100	98.795	Ailuropoda_melanoleuca
ENSCHIG00000024795	-	99	73.678	ENSACIG00000015082	eif3c	94	83.721	Amphilophus_citrinellus
ENSCHIG00000024795	-	94	84.158	ENSAOCG00000021466	eif3c	94	84.158	Amphiprion_ocellaris
ENSCHIG00000024795	-	94	84.158	ENSAPEG00000010521	eif3c	94	84.158	Amphiprion_percula
ENSCHIG00000024795	-	99	76.413	ENSATEG00000019001	eif3c	98	76.304	Anabas_testudineus
ENSCHIG00000024795	-	100	86.369	ENSACAG00000005937	-	100	86.041	Anolis_carolinensis
ENSCHIG00000024795	-	100	97.809	ENSANAG00000020640	-	100	97.809	Aotus_nancymaae
ENSCHIG00000024795	-	85	80.293	ENSACLG00000009322	eif3c	92	80.945	Astatotilapia_calliptera
ENSCHIG00000024795	-	85	83.140	ENSACLG00000009347	eif3c	90	83.802	Astatotilapia_calliptera
ENSCHIG00000024795	-	99	76.923	ENSAMXG00000020949	eif3c	98	76.503	Astyanax_mexicanus
ENSCHIG00000024795	-	100	99.452	ENSBTAG00000006543	EIF3CL	100	99.452	Bos_taurus
ENSCHIG00000024795	-	95	42.679	WBGene00001226	eif-3.C	66	46.916	Caenorhabditis_elegans
ENSCHIG00000024795	-	100	97.590	ENSCJAG00000006341	-	100	97.590	Callithrix_jacchus
ENSCHIG00000024795	-	100	98.686	ENSCAFG00000017143	-	100	98.686	Canis_familiaris
ENSCHIG00000024795	-	100	98.795	ENSCAFG00020017587	-	100	98.795	Canis_lupus_dingo
ENSCHIG00000024795	-	100	97.371	ENSTSYG00000003486	-	100	97.371	Carlito_syrichta
ENSCHIG00000024795	-	96	88.675	ENSCAPG00000015887	-	100	87.203	Cavia_aperea
ENSCHIG00000024795	-	100	98.138	ENSCPOG00000007533	-	100	98.138	Cavia_porcellus
ENSCHIG00000024795	-	100	96.930	ENSCCAG00000034928	-	100	96.930	Cebus_capucinus
ENSCHIG00000024795	-	100	92.442	ENSCCAG00000027724	-	100	90.471	Cebus_capucinus
ENSCHIG00000024795	-	99	82.819	ENSCCAG00000029099	-	99	80.246	Cebus_capucinus
ENSCHIG00000024795	-	100	97.809	ENSCATG00000032673	-	100	97.809	Cercocebus_atys
ENSCHIG00000024795	-	100	97.371	ENSCLAG00000011094	-	100	97.371	Chinchilla_lanigera
ENSCHIG00000024795	-	100	97.809	ENSCSAG00000006297	-	100	97.809	Chlorocebus_sabaeus
ENSCHIG00000024795	-	55	83.012	ENSCHOG00000003120	-	88	83.012	Choloepus_hoffmanni
ENSCHIG00000024795	-	72	92.038	ENSCPBG00000012407	-	94	80.124	Chrysemys_picta_bellii
ENSCHIG00000024795	-	78	57.391	ENSCSAVG00000006744	-	90	57.391	Ciona_savignyi
ENSCHIG00000024795	-	100	97.809	ENSCANG00000033626	-	100	97.809	Colobus_angolensis_palliatus
ENSCHIG00000024795	-	100	97.262	ENSCGRG00001015265	EIF3C	100	96.386	Cricetulus_griseus_chok1gshd
ENSCHIG00000024795	-	99	75.708	ENSCSEG00000017770	eif3c	100	74.454	Cynoglossus_semilaevis
ENSCHIG00000024795	-	99	75.926	ENSCVAG00000005402	eif3c	98	76.035	Cyprinodon_variegatus
ENSCHIG00000024795	-	99	76.528	ENSDARG00000016443	eif3c	98	75.926	Danio_rerio
ENSCHIG00000024795	-	100	98.357	ENSDNOG00000031497	-	100	98.357	Dasypus_novemcinctus
ENSCHIG00000024795	-	100	98.028	ENSDORG00000016471	Eif3c	100	98.028	Dipodomys_ordii
ENSCHIG00000024795	-	98	51.165	FBgn0034258	eIF3c	95	51.059	Drosophila_melanogaster
ENSCHIG00000024795	-	92	98.624	ENSETEG00000013527	-	92	98.624	Echinops_telfairi
ENSCHIG00000024795	-	99	63.158	ENSEBUG00000001629	eif3c	99	62.931	Eptatretus_burgeri
ENSCHIG00000024795	-	100	98.686	ENSECAG00000008746	-	100	98.686	Equus_caballus
ENSCHIG00000024795	-	65	63.776	ENSEEUG00000000726	-	64	64.456	Erinaceus_europaeus
ENSCHIG00000024795	-	87	97.243	ENSEEUG00000006148	-	100	97.243	Erinaceus_europaeus
ENSCHIG00000024795	-	99	75.708	ENSELUG00000022257	eif3c	92	83.914	Esox_lucius
ENSCHIG00000024795	-	100	98.357	ENSFCAG00000015782	-	100	98.357	Felis_catus
ENSCHIG00000024795	-	100	97.809	ENSFDAG00000003588	-	100	97.809	Fukomys_damarensis
ENSCHIG00000024795	-	99	76.113	ENSFHEG00000014154	EIF3C	98	76.113	Fundulus_heteroclitus
ENSCHIG00000024795	-	97	75.336	ENSGMOG00000016885	eif3c	99	75.673	Gadus_morhua
ENSCHIG00000024795	-	96	76.644	ENSGACG00000007652	eif3c	100	75.791	Gasterosteus_aculeatus
ENSCHIG00000024795	-	92	83.589	ENSGAGG00000006666	-	100	83.353	Gopherus_agassizii
ENSCHIG00000024795	-	54	97.683	ENSGGOG00000022677	-	100	97.683	Gorilla_gorilla
ENSCHIG00000024795	-	99	95.600	ENSGGOG00000026919	EIF3C	100	97.838	Gorilla_gorilla
ENSCHIG00000024795	-	100	98.138	ENSHGLG00000011445	EIF3C	100	98.138	Heterocephalus_glaber_female
ENSCHIG00000024795	-	100	98.138	ENSHGLG00100000217	EIF3C	100	98.138	Heterocephalus_glaber_male
ENSCHIG00000024795	-	99	75.353	ENSHCOG00000019694	eif3c	98	75.463	Hippocampus_comes
ENSCHIG00000024795	-	99	76.030	ENSIPUG00000016878	eif3c	98	76.522	Ictalurus_punctatus
ENSCHIG00000024795	-	100	98.138	ENSSTOG00000021278	-	100	98.138	Ictidomys_tridecemlineatus
ENSCHIG00000024795	-	100	97.262	ENSJJAG00000012722	Eif3c	100	97.262	Jaculus_jaculus
ENSCHIG00000024795	-	99	76.736	ENSKMAG00000021662	eif3c	97	75.326	Kryptolebias_marmoratus
ENSCHIG00000024795	-	99	74.917	ENSLBEG00000023370	eif3c	99	74.002	Labrus_bergylta
ENSCHIG00000024795	-	100	78.689	ENSLACG00000000770	eif3c	100	79.935	Latimeria_chalumnae
ENSCHIG00000024795	-	100	97.919	ENSLAFG00000027426	-	100	97.919	Loxodonta_africana
ENSCHIG00000024795	-	100	97.809	ENSMFAG00000041930	-	100	97.809	Macaca_fascicularis
ENSCHIG00000024795	-	100	97.809	ENSMMUG00000011798	-	100	97.809	Macaca_mulatta
ENSCHIG00000024795	-	100	97.809	ENSMNEG00000023915	-	100	97.809	Macaca_nemestrina
ENSCHIG00000024795	-	100	97.809	ENSMLEG00000027529	-	100	97.809	Mandrillus_leucophaeus
ENSCHIG00000024795	-	99	76.319	ENSMAMG00000012512	eif3c	95	84.667	Mastacembelus_armatus
ENSCHIG00000024795	-	85	80.456	ENSMZEG00005013685	eif3c	92	81.107	Maylandia_zebra
ENSCHIG00000024795	-	99	73.081	ENSMZEG00005013699	eif3c	89	83.802	Maylandia_zebra
ENSCHIG00000024795	-	100	97.152	ENSMAUG00000010621	Eif3c	100	96.276	Mesocricetus_auratus
ENSCHIG00000024795	-	100	98.357	ENSMICG00000036748	-	100	98.357	Microcebus_murinus
ENSCHIG00000024795	-	100	95.181	ENSMOCG00000004204	Eif3c	100	94.085	Microtus_ochrogaster
ENSCHIG00000024795	-	100	71.851	ENSMMOG00000001572	eif3c	94	82.838	Mola_mola
ENSCHIG00000024795	-	100	94.311	ENSMODG00000015579	-	100	92.888	Monodelphis_domestica
ENSCHIG00000024795	-	85	83.914	ENSMALG00000008907	eif3c	92	84.437	Monopterus_albus
ENSCHIG00000024795	-	100	95.833	MGP_CAROLIEiJ_G0030451	Eif3c	100	95.833	Mus_caroli
ENSCHIG00000024795	-	100	95.833	ENSMUSG00000030738	Eif3c	100	95.833	Mus_musculus
ENSCHIG00000024795	-	100	95.504	MGP_PahariEiJ_G0013661	Eif3c	100	95.504	Mus_pahari
ENSCHIG00000024795	-	100	95.833	MGP_SPRETEiJ_G0031565	Eif3c	100	95.833	Mus_spretus
ENSCHIG00000024795	-	96	98.068	ENSMPUG00000012732	-	100	98.068	Mustela_putorius_furo
ENSCHIG00000024795	-	100	97.371	ENSMLUG00000015558	-	100	97.371	Myotis_lucifugus
ENSCHIG00000024795	-	93	87.273	ENSNGAG00000010901	-	98	87.273	Nannospalax_galili
ENSCHIG00000024795	-	100	97.919	ENSNGAG00000007177	-	100	97.919	Nannospalax_galili
ENSCHIG00000024795	-	100	83.477	ENSNLEG00000001425	-	91	93.333	Nomascus_leucogenys
ENSCHIG00000024795	-	84	74.757	ENSMEUG00000005317	-	95	72.414	Notamacropus_eugenii
ENSCHIG00000024795	-	100	77.705	ENSMEUG00000009939	-	99	76.175	Notamacropus_eugenii
ENSCHIG00000024795	-	100	98.138	ENSOPRG00000000931	-	100	98.138	Ochotona_princeps
ENSCHIG00000024795	-	100	97.809	ENSODEG00000013508	-	100	97.809	Octodon_degus
ENSCHIG00000024795	-	67	62.871	ENSONIG00000011434	eif3c	99	63.531	Oreochromis_niloticus
ENSCHIG00000024795	-	100	90.948	ENSOANG00000011410	-	100	89.763	Ornithorhynchus_anatinus
ENSCHIG00000024795	-	100	98.576	ENSOCUG00000022489	-	100	98.576	Oryctolagus_cuniculus
ENSCHIG00000024795	-	99	75.083	ENSORLG00000006318	eif3c	98	74.400	Oryzias_latipes
ENSCHIG00000024795	-	99	75.083	ENSORLG00020015713	eif3c	90	83.220	Oryzias_latipes_hni
ENSCHIG00000024795	-	99	74.279	ENSORLG00015013772	eif3c	97	74.614	Oryzias_latipes_hsok
ENSCHIG00000024795	-	100	74.544	ENSOMEG00000020450	eif3c	100	73.922	Oryzias_melastigma
ENSCHIG00000024795	-	100	97.809	ENSOGAG00000012737	-	100	97.809	Otolemur_garnettii
ENSCHIG00000024795	-	100	100.000	ENSOARG00000002892	-	100	100.000	Ovis_aries
ENSCHIG00000024795	-	100	98.357	ENSPPRG00000012336	-	100	98.357	Panthera_pardus
ENSCHIG00000024795	-	100	98.357	ENSPTIG00000011712	-	100	98.357	Panthera_tigris_altaica
ENSCHIG00000024795	-	100	97.809	ENSPANG00000021151	-	100	97.809	Papio_anubis
ENSCHIG00000024795	-	99	76.253	ENSPKIG00000002049	eif3c	98	75.539	Paramormyrops_kingsleyae
ENSCHIG00000024795	-	89	85.075	ENSPMGG00000005409	eif3c	94	85.075	Periophthalmus_magnuspinnatus
ENSCHIG00000024795	-	100	96.053	ENSPEMG00000010899	Eif3c	100	96.053	Peromyscus_maniculatus_bairdii
ENSCHIG00000024795	-	100	94.420	ENSPCIG00000025206	-	100	93.217	Phascolarctos_cinereus
ENSCHIG00000024795	-	99	76.113	ENSPFOG00000004476	eif3c	98	75.217	Poecilia_formosa
ENSCHIG00000024795	-	100	72.757	ENSPLAG00000017480	eif3c	98	75.294	Poecilia_latipinna
ENSCHIG00000024795	-	99	76.304	ENSPMEG00000019512	eif3c	98	75.408	Poecilia_mexicana
ENSCHIG00000024795	-	100	73.090	ENSPREG00000023139	eif3c	89	81.626	Poecilia_reticulata
ENSCHIG00000024795	-	100	94.743	ENSPPYG00000007227	-	100	93.538	Pongo_abelii
ENSCHIG00000024795	-	66	99.334	ENSPCAG00000012710	-	100	99.334	Procavia_capensis
ENSCHIG00000024795	-	100	98.576	ENSPCOG00000019289	-	100	98.576	Propithecus_coquereli
ENSCHIG00000024795	-	100	97.919	ENSPVAG00000005804	-	100	97.919	Pteropus_vampyrus
ENSCHIG00000024795	-	65	69.079	ENSPNYG00000016530	eif3c	81	81.212	Pundamilia_nyererei
ENSCHIG00000024795	-	99	76.805	ENSPNAG00000024040	eif3c	99	77.049	Pygocentrus_nattereri
ENSCHIG00000024795	-	100	96.933	ENSRNOG00000018761	Eif3c	100	96.933	Rattus_norvegicus
ENSCHIG00000024795	-	97	97.735	ENSRBIG00000044009	-	98	93.521	Rhinopithecus_bieti
ENSCHIG00000024795	-	100	97.809	ENSRROG00000043626	-	100	97.809	Rhinopithecus_roxellana
ENSCHIG00000024795	-	77	31.365	YMR309C	-	81	30.699	Saccharomyces_cerevisiae
ENSCHIG00000024795	-	100	97.481	ENSSBOG00000032155	-	100	97.481	Saimiri_boliviensis_boliviensis
ENSCHIG00000024795	-	96	93.884	ENSSHAG00000011808	-	100	92.639	Sarcophilus_harrisii
ENSCHIG00000024795	-	99	75.628	ENSSFOG00015021823	eif3c	98	75.847	Scleropages_formosus
ENSCHIG00000024795	-	97	76.854	ENSSMAG00000016638	eif3c	97	76.517	Scophthalmus_maximus
ENSCHIG00000024795	-	99	76.906	ENSSDUG00000023117	eif3c	97	81.891	Seriola_dumerili
ENSCHIG00000024795	-	99	76.580	ENSSLDG00000009706	eif3c	93	83.660	Seriola_lalandi_dorsalis
ENSCHIG00000024795	-	100	84.902	ENSSPUG00000016470	-	100	84.683	Sphenodon_punctatus
ENSCHIG00000024795	-	100	76.196	ENSSPAG00000000426	eif3c	100	75.870	Stegastes_partitus
ENSCHIG00000024795	-	100	98.576	ENSSSCG00000034927	-	100	98.576	Sus_scrofa
ENSCHIG00000024795	-	99	73.955	ENSTRUG00000008951	eif3c	99	74.062	Takifugu_rubripes
ENSCHIG00000024795	-	100	74.130	ENSTNIG00000015210	eif3c	100	73.168	Tetraodon_nigroviridis
ENSCHIG00000024795	-	100	98.138	ENSTTRG00000005880	-	100	98.138	Tursiops_truncatus
ENSCHIG00000024795	-	72	99.389	ENSUAMG00000001127	-	91	100.000	Ursus_americanus
ENSCHIG00000024795	-	100	98.686	ENSUMAG00000010927	-	100	98.686	Ursus_maritimus
ENSCHIG00000024795	-	100	97.262	ENSVVUG00000025970	-	100	97.262	Vulpes_vulpes
ENSCHIG00000024795	-	100	78.162	ENSXETG00000002941	eif3c	100	78.054	Xenopus_tropicalis
ENSCHIG00000024795	-	100	76.052	ENSXMAG00000013796	eif3c	100	75.784	Xiphophorus_maculatus