EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000025004 (Gene tree)
Gene ID: 102188173
Gene Symbol: -
Alias: PAP
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 39933 bases
Position: chr21:60692678-60732610
Accession: 102188173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000030274	PAP_RNA-bind	PF04926.15	5.1e-25	1	1
ENSCHIP00000030211	PAP_RNA-bind	PF04926.15	5.5e-25	1	1
ENSCHIP00000030260	PAP_RNA-bind	PF04926.15	7.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000038082	-	1956	-	ENSCHIP00000030211	651 (aa)	-	UPI000D196461
ENSCHIT00000038131	-	2220	XM_018066055	ENSCHIP00000030260	739 (aa)	XP_017921544	UPI000D18B6FB
ENSCHIT00000038145	-	1899	XM_018066060	ENSCHIP00000030274	632 (aa)	XP_017921549	UPI000D191096

Gene Model

Click here to download ENSCHIG00000025004's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000025004	-	94	67.928	ENSCHIG00000015082	PAPOLG	99	58.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025004	-	100	97.181	ENSG00000090060	PAPOLA	100	97.181	Homo_sapiens
ENSCHIG00000025004	-	99	98.234	ENSAMEG00000014142	PAPOLA	99	98.234	Ailuropoda_melanoleuca
ENSCHIG00000025004	-	97	95.617	ENSAPLG00000006645	PAPOLA	99	90.612	Anas_platyrhynchos
ENSCHIG00000025004	-	99	95.215	ENSACAG00000013474	PAPOLA	99	95.144	Anolis_carolinensis
ENSCHIG00000025004	-	84	90.824	ENSANAG00000027941	-	98	91.353	Aotus_nancymaae
ENSCHIG00000025004	-	100	96.913	ENSANAG00000018274	PAPOLA	99	98.897	Aotus_nancymaae
ENSCHIG00000025004	-	95	79.242	ENSAMXG00000018141	papola	99	85.199	Astyanax_mexicanus
ENSCHIG00000025004	-	100	99.594	ENSBTAG00000004054	PAPOLA	100	99.594	Bos_taurus
ENSCHIG00000025004	-	100	96.913	ENSCJAG00000006512	PAPOLA	99	98.897	Callithrix_jacchus
ENSCHIG00000025004	-	99	98.638	ENSCAFG00000017783	PAPOLA	99	98.638	Canis_familiaris
ENSCHIG00000025004	-	100	98.241	ENSCAFG00020011550	PAPOLA	100	98.241	Canis_lupus_dingo
ENSCHIG00000025004	-	99	97.684	ENSTSYG00000012384	PAPOLA	99	97.684	Carlito_syrichta
ENSCHIG00000025004	-	100	92.828	ENSCPOG00000002648	PAPOLA	100	92.828	Cavia_porcellus
ENSCHIG00000025004	-	100	97.047	ENSCCAG00000025120	PAPOLA	100	97.047	Cebus_capucinus
ENSCHIG00000025004	-	100	97.181	ENSCATG00000018815	PAPOLA	99	99.255	Cercocebus_atys
ENSCHIG00000025004	-	100	96.752	ENSCLAG00000016342	PAPOLA	100	96.879	Chinchilla_lanigera
ENSCHIG00000025004	-	100	97.181	ENSCSAG00000010516	PAPOLA	100	97.181	Chlorocebus_sabaeus
ENSCHIG00000025004	-	72	84.196	ENSCHOG00000001115	PAPOLA	72	84.196	Choloepus_hoffmanni
ENSCHIG00000025004	-	98	95.491	ENSCPBG00000024125	PAPOLA	100	92.568	Chrysemys_picta_bellii
ENSCHIG00000025004	-	99	92.432	ENSCANG00000000159	PAPOLA	99	92.432	Colobus_angolensis_palliatus
ENSCHIG00000025004	-	99	84.011	ENSCGRG00001002732	-	99	84.011	Cricetulus_griseus_chok1gshd
ENSCHIG00000025004	-	100	95.940	ENSCGRG00001022693	-	100	95.940	Cricetulus_griseus_chok1gshd
ENSCHIG00000025004	-	100	87.821	ENSCGRG00001000229	-	99	89.677	Cricetulus_griseus_chok1gshd
ENSCHIG00000025004	-	100	95.816	ENSCGRG00000003664	-	100	95.816	Cricetulus_griseus_crigri
ENSCHIG00000025004	-	98	85.185	ENSCGRG00000000257	-	100	81.461	Cricetulus_griseus_crigri
ENSCHIG00000025004	-	98	81.267	ENSCGRG00000001888	-	96	80.716	Cricetulus_griseus_crigri
ENSCHIG00000025004	-	76	53.638	ENSCSEG00000001841	-	71	53.862	Cynoglossus_semilaevis
ENSCHIG00000025004	-	99	75.000	ENSDARG00000009585	papola	100	70.667	Danio_rerio
ENSCHIG00000025004	-	59	97.844	ENSDORG00000013415	-	100	88.753	Dipodomys_ordii
ENSCHIG00000025004	-	99	84.354	ENSETEG00000004889	PAPOLA	99	84.218	Echinops_telfairi
ENSCHIG00000025004	-	92	80.345	ENSELUG00000018972	papola	100	68.074	Esox_lucius
ENSCHIG00000025004	-	100	98.647	ENSFCAG00000006784	PAPOLA	100	98.647	Felis_catus
ENSCHIG00000025004	-	97	94.643	ENSFALG00000002547	PAPOLA	98	87.467	Ficedula_albicollis
ENSCHIG00000025004	-	99	95.794	ENSFDAG00000010370	PAPOLA	99	95.794	Fukomys_damarensis
ENSCHIG00000025004	-	55	85.879	ENSGMOG00000010209	papola	100	66.179	Gadus_morhua
ENSCHIG00000025004	-	98	94.847	ENSGALG00000033099	PAPOLA	100	89.716	Gallus_gallus
ENSCHIG00000025004	-	76	53.958	ENSGACG00000006142	-	100	53.542	Gasterosteus_aculeatus
ENSCHIG00000025004	-	98	95.491	ENSGAGG00000020500	PAPOLA	99	94.713	Gopherus_agassizii
ENSCHIG00000025004	-	100	97.181	ENSGGOG00000006287	PAPOLA	100	97.181	Gorilla_gorilla
ENSCHIG00000025004	-	100	96.211	ENSHGLG00000007909	-	100	96.211	Heterocephalus_glaber_female
ENSCHIG00000025004	-	100	78.349	ENSHGLG00000007467	-	100	77.943	Heterocephalus_glaber_female
ENSCHIG00000025004	-	99	85.034	ENSHGLG00000017457	-	100	84.332	Heterocephalus_glaber_female
ENSCHIG00000025004	-	100	96.076	ENSHGLG00100017273	PAPOLA	100	96.076	Heterocephalus_glaber_male
ENSCHIG00000025004	-	98	74.961	ENSIPUG00000005919	papola	100	67.462	Ictalurus_punctatus
ENSCHIG00000025004	-	100	98.106	ENSSTOG00000011471	PAPOLA	100	98.106	Ictidomys_tridecemlineatus
ENSCHIG00000025004	-	99	96.458	ENSJJAG00000024340	Papola	99	96.458	Jaculus_jaculus
ENSCHIG00000025004	-	97	83.117	ENSLACG00000018136	PAPOLA	99	77.341	Latimeria_chalumnae
ENSCHIG00000025004	-	99	67.868	ENSLOCG00000008632	papola	99	66.442	Lepisosteus_oculatus
ENSCHIG00000025004	-	99	96.866	ENSLAFG00000000946	PAPOLA	99	96.866	Loxodonta_africana
ENSCHIG00000025004	-	100	97.181	ENSMFAG00000001792	PAPOLA	99	99.076	Macaca_fascicularis
ENSCHIG00000025004	-	100	97.181	ENSMMUG00000018610	PAPOLA	100	97.181	Macaca_mulatta
ENSCHIG00000025004	-	100	97.181	ENSMNEG00000043747	PAPOLA	100	97.181	Macaca_nemestrina
ENSCHIG00000025004	-	100	97.181	ENSMLEG00000032066	PAPOLA	100	97.181	Mandrillus_leucophaeus
ENSCHIG00000025004	-	79	95.618	ENSMGAG00000013228	-	100	89.211	Meleagris_gallopavo
ENSCHIG00000025004	-	100	95.670	ENSMAUG00000017178	Papola	100	95.670	Mesocricetus_auratus
ENSCHIG00000025004	-	100	98.378	ENSMICG00000010347	PAPOLA	100	98.378	Microcebus_murinus
ENSCHIG00000025004	-	100	96.346	ENSMOCG00000021670	Papola	100	96.346	Microtus_ochrogaster
ENSCHIG00000025004	-	98	85.829	ENSMODG00000001969	-	99	80.940	Monodelphis_domestica
ENSCHIG00000025004	-	100	96.211	ENSMODG00000012887	-	100	96.211	Monodelphis_domestica
ENSCHIG00000025004	-	100	95.535	MGP_CAROLIEiJ_G0018093	Papola	100	95.535	Mus_caroli
ENSCHIG00000025004	-	100	95.805	ENSMUSG00000021111	Papola	100	95.805	Mus_musculus
ENSCHIG00000025004	-	100	95.805	MGP_PahariEiJ_G0029850	Papola	100	95.805	Mus_pahari
ENSCHIG00000025004	-	100	95.940	MGP_SPRETEiJ_G0018943	Papola	100	95.940	Mus_spretus
ENSCHIG00000025004	-	100	98.647	ENSMPUG00000003054	PAPOLA	100	98.647	Mustela_putorius_furo
ENSCHIG00000025004	-	100	96.076	ENSMLUG00000010922	PAPOLA	100	96.076	Myotis_lucifugus
ENSCHIG00000025004	-	100	96.346	ENSNGAG00000022172	Papola	100	96.346	Nannospalax_galili
ENSCHIG00000025004	-	99	92.523	ENSNLEG00000000625	PAPOLA	99	92.523	Nomascus_leucogenys
ENSCHIG00000025004	-	66	91.429	ENSMEUG00000007831	-	74	88.976	Notamacropus_eugenii
ENSCHIG00000025004	-	97	91.956	ENSOPRG00000007625	PAPOLA	100	91.956	Ochotona_princeps
ENSCHIG00000025004	-	75	54.202	ENSONIG00000001062	-	96	54.202	Oreochromis_niloticus
ENSCHIG00000025004	-	98	96.618	ENSOANG00000013812	PAPOLA	99	90.392	Ornithorhynchus_anatinus
ENSCHIG00000025004	-	99	95.238	ENSOCUG00000011531	PAPOLA	99	95.238	Oryctolagus_cuniculus
ENSCHIG00000025004	-	100	97.838	ENSOGAG00000004611	PAPOLA	100	97.838	Otolemur_garnettii
ENSCHIG00000025004	-	100	99.459	ENSOARG00000016579	-	100	99.459	Ovis_aries
ENSCHIG00000025004	-	100	97.181	ENSPPAG00000030505	PAPOLA	100	97.181	Pan_paniscus
ENSCHIG00000025004	-	100	98.647	ENSPPRG00000008616	PAPOLA	100	98.647	Panthera_pardus
ENSCHIG00000025004	-	99	99.046	ENSPTIG00000018852	PAPOLA	99	99.046	Panthera_tigris_altaica
ENSCHIG00000025004	-	100	97.181	ENSPTRG00000006704	PAPOLA	100	97.181	Pan_troglodytes
ENSCHIG00000025004	-	100	97.181	ENSPANG00000025582	PAPOLA	98	99.255	Papio_anubis
ENSCHIG00000025004	-	99	75.814	ENSPKIG00000014471	papola	99	70.159	Paramormyrops_kingsleyae
ENSCHIG00000025004	-	98	95.491	ENSPSIG00000014157	PAPOLA	87	92.838	Pelodiscus_sinensis
ENSCHIG00000025004	-	100	96.211	ENSPEMG00000000043	Papola	100	96.211	Peromyscus_maniculatus_bairdii
ENSCHIG00000025004	-	100	95.811	ENSPCIG00000013234	PAPOLA	100	95.811	Phascolarctos_cinereus
ENSCHIG00000025004	-	99	95.270	ENSPPYG00000006128	PAPOLA	100	94.892	Pongo_abelii
ENSCHIG00000025004	-	85	95.725	ENSPCAG00000004199	PAPOLA	100	91.006	Procavia_capensis
ENSCHIG00000025004	-	99	95.504	ENSPCOG00000022117	PAPOLA	99	95.504	Propithecus_coquereli
ENSCHIG00000025004	-	100	97.023	ENSPVAG00000013925	PAPOLA	100	97.023	Pteropus_vampyrus
ENSCHIG00000025004	-	91	81.100	ENSPNAG00000010467	papola	100	69.496	Pygocentrus_nattereri
ENSCHIG00000025004	-	100	95.399	ENSRNOG00000004827	Papola	100	95.399	Rattus_norvegicus
ENSCHIG00000025004	-	97	97.890	ENSRBIG00000038490	PAPOLA	98	97.757	Rhinopithecus_bieti
ENSCHIG00000025004	-	100	97.181	ENSRROG00000025545	PAPOLA	100	97.181	Rhinopithecus_roxellana
ENSCHIG00000025004	-	99	97.297	ENSSBOG00000024061	PAPOLA	99	97.297	Saimiri_boliviensis_boliviensis
ENSCHIG00000025004	-	99	96.049	ENSSHAG00000015211	PAPOLA	99	96.049	Sarcophilus_harrisii
ENSCHIG00000025004	-	97	77.508	ENSSFOG00015004431	papola	98	86.162	Scleropages_formosus
ENSCHIG00000025004	-	76	57.676	ENSSDUG00000018247	-	72	57.438	Seriola_dumerili
ENSCHIG00000025004	-	98	95.016	ENSSPUG00000005835	PAPOLA	100	92.162	Sphenodon_punctatus
ENSCHIG00000025004	-	100	98.241	ENSSSCG00000002505	-	100	98.241	Sus_scrofa
ENSCHIG00000025004	-	97	94.805	ENSTGUG00000012687	PAPOLA	99	90.327	Taeniopygia_guttata
ENSCHIG00000025004	-	69	95.455	ENSTBEG00000000194	PAPOLA	75	88.043	Tupaia_belangeri
ENSCHIG00000025004	-	80	98.701	ENSTTRG00000005717	PAPOLA	80	98.701	Tursiops_truncatus
ENSCHIG00000025004	-	67	99.289	ENSUAMG00000025737	PAPOLA	98	99.289	Ursus_americanus
ENSCHIG00000025004	-	99	98.229	ENSVPAG00000006464	PAPOLA	99	98.229	Vicugna_pacos
ENSCHIG00000025004	-	100	98.241	ENSVVUG00000028340	PAPOLA	100	98.241	Vulpes_vulpes
ENSCHIG00000025004	-	99	88.038	ENSXETG00000013949	papola	100	83.221	Xenopus_tropicalis