EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000025070 (Gene tree)
Gene ID: 102170255
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 86866 bases
Position: chr16:50133534-50220399
Accession: 102170255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000030280	RRM_5	PF13893.6	3e-07	1	2
ENSCHIP00000030280	RRM_5	PF13893.6	3e-07	2	2
ENSCHIP00000030257	RRM_5	PF13893.6	3.2e-07	1	2
ENSCHIP00000030257	RRM_5	PF13893.6	3.2e-07	2	2
ENSCHIP00000030280	RRM_1	PF00076.22	1.8e-43	1	4
ENSCHIP00000030280	RRM_1	PF00076.22	1.8e-43	2	4
ENSCHIP00000030280	RRM_1	PF00076.22	1.8e-43	3	4
ENSCHIP00000030280	RRM_1	PF00076.22	1.8e-43	4	4
ENSCHIP00000030257	RRM_1	PF00076.22	1.9e-43	1	4
ENSCHIP00000030257	RRM_1	PF00076.22	1.9e-43	2	4
ENSCHIP00000030257	RRM_1	PF00076.22	1.9e-43	3	4
ENSCHIP00000030257	RRM_1	PF00076.22	1.9e-43	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000038128	SPEN-201	10965	XM_018060579	ENSCHIP00000030257	3654 (aa)	XP_017916068	UPI000847253A
ENSCHIT00000038151	SPEN-202	10854	XM_018060580	ENSCHIP00000030280	3617 (aa)	XP_017916069	UPI000D1948F8

Gene Model

Click here to download ENSCHIG00000025070's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025070's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025070	SPEN	100	87.317	ENSG00000065526	SPEN	99	99.327	Homo_sapiens
ENSCHIG00000025070	SPEN	96	81.461	ENSAPOG00000009853	-	91	74.906	Acanthochromis_polyacanthus
ENSCHIG00000025070	SPEN	83	84.211	ENSAPOG00000011411	si:ch1073-335m2.2	85	84.211	Acanthochromis_polyacanthus
ENSCHIG00000025070	SPEN	100	89.558	ENSAMEG00000011817	SPEN	100	89.449	Ailuropoda_melanoleuca
ENSCHIG00000025070	SPEN	56	77.778	ENSAOCG00000008077	si:ch1073-335m2.2	60	77.778	Amphiprion_ocellaris
ENSCHIG00000025070	SPEN	98	81.461	ENSAOCG00000014505	-	90	49.629	Amphiprion_ocellaris
ENSCHIG00000025070	SPEN	83	84.211	ENSAPEG00000013515	si:ch1073-335m2.2	88	84.211	Amphiprion_percula
ENSCHIG00000025070	SPEN	98	81.461	ENSAPEG00000010288	-	100	46.146	Amphiprion_percula
ENSCHIG00000025070	SPEN	98	82.584	ENSATEG00000005627	-	99	45.813	Anabas_testudineus
ENSCHIG00000025070	SPEN	79	84.024	ENSATEG00000007674	si:ch1073-335m2.2	87	84.024	Anabas_testudineus
ENSCHIG00000025070	SPEN	97	63.272	ENSACAG00000013761	SPEN	100	63.489	Anolis_carolinensis
ENSCHIG00000025070	SPEN	99	86.417	ENSANAG00000034428	SPEN	99	86.393	Aotus_nancymaae
ENSCHIG00000025070	SPEN	96	81.461	ENSACLG00000016922	-	99	45.562	Astatotilapia_calliptera
ENSCHIG00000025070	SPEN	75	84.795	ENSACLG00000021433	si:ch1073-335m2.2	85	84.795	Astatotilapia_calliptera
ENSCHIG00000025070	SPEN	99	83.240	ENSAMXG00000012485	spen	100	47.419	Astyanax_mexicanus
ENSCHIG00000025070	SPEN	100	97.318	ENSBTAG00000018729	SPEN	100	97.318	Bos_taurus
ENSCHIG00000025070	SPEN	100	86.380	ENSCJAG00000008527	SPEN	100	86.410	Callithrix_jacchus
ENSCHIG00000025070	SPEN	88	87.388	ENSCAFG00000016132	-	98	87.504	Canis_familiaris
ENSCHIG00000025070	SPEN	92	85.685	ENSTSYG00000036016	SPEN	99	85.978	Carlito_syrichta
ENSCHIG00000025070	SPEN	99	80.794	ENSCAPG00000013803	SPEN	100	81.976	Cavia_aperea
ENSCHIG00000025070	SPEN	99	80.549	ENSCPOG00000014036	SPEN	100	80.850	Cavia_porcellus
ENSCHIG00000025070	SPEN	100	82.126	ENSCCAG00000020258	SPEN	99	84.909	Cebus_capucinus
ENSCHIG00000025070	SPEN	95	100.000	ENSCATG00000015079	SPEN	99	99.265	Cercocebus_atys
ENSCHIG00000025070	SPEN	99	82.151	ENSCLAG00000002018	SPEN	100	82.068	Chinchilla_lanigera
ENSCHIG00000025070	SPEN	100	87.259	ENSCSAG00000000841	SPEN	100	87.144	Chlorocebus_sabaeus
ENSCHIG00000025070	SPEN	99	85.466	ENSCANG00000034547	SPEN	99	85.648	Colobus_angolensis_palliatus
ENSCHIG00000025070	SPEN	99	80.647	ENSCGRG00001007725	Spen	100	80.597	Cricetulus_griseus_chok1gshd
ENSCHIG00000025070	SPEN	99	79.851	ENSCGRG00000010581	Spen	100	79.691	Cricetulus_griseus_crigri
ENSCHIG00000025070	SPEN	98	84.270	ENSCSEG00000003915	-	100	46.442	Cynoglossus_semilaevis
ENSCHIG00000025070	SPEN	69	61.620	ENSCVAG00000009075	si:ch1073-335m2.2	93	61.620	Cyprinodon_variegatus
ENSCHIG00000025070	SPEN	97	44.941	ENSCVAG00000016346	-	89	49.077	Cyprinodon_variegatus
ENSCHIG00000025070	SPEN	63	62.151	ENSDARG00000074332	si:ch1073-335m2.2	68	62.151	Danio_rerio
ENSCHIG00000025070	SPEN	97	47.125	ENSDARG00000074245	spen	100	88.889	Danio_rerio
ENSCHIG00000025070	SPEN	100	87.018	ENSDNOG00000041948	SPEN	100	86.991	Dasypus_novemcinctus
ENSCHIG00000025070	SPEN	99	79.873	ENSDORG00000023909	Spen	99	80.188	Dipodomys_ordii
ENSCHIG00000025070	SPEN	68	97.059	ENSETEG00000016692	-	67	97.071	Echinops_telfairi
ENSCHIG00000025070	SPEN	96	100.000	ENSEASG00005015911	SPEN	99	100.000	Equus_asinus_asinus
ENSCHIG00000025070	SPEN	96	100.000	ENSECAG00000008833	SPEN	99	100.000	Equus_caballus
ENSCHIG00000025070	SPEN	75	93.023	ENSEEUG00000010255	SPEN	76	93.023	Erinaceus_europaeus
ENSCHIG00000025070	SPEN	68	80.556	ENSELUG00000007726	si:ch1073-335m2.2	63	80.110	Esox_lucius
ENSCHIG00000025070	SPEN	89	62.594	ENSFALG00000003551	SPEN	100	62.730	Ficedula_albicollis
ENSCHIG00000025070	SPEN	99	81.512	ENSFDAG00000010212	SPEN	100	81.736	Fukomys_damarensis
ENSCHIG00000025070	SPEN	89	74.510	ENSFHEG00000004544	si:ch1073-335m2.2	86	75.000	Fundulus_heteroclitus
ENSCHIG00000025070	SPEN	81	67.068	ENSGMOG00000008397	-	95	67.068	Gadus_morhua
ENSCHIG00000025070	SPEN	79	81.006	ENSGMOG00000008156	si:ch1073-335m2.2	83	81.006	Gadus_morhua
ENSCHIG00000025070	SPEN	97	44.522	ENSGAFG00000015819	-	91	74.157	Gambusia_affinis
ENSCHIG00000025070	SPEN	91	84.615	ENSGAFG00000021570	si:ch1073-335m2.2	86	84.615	Gambusia_affinis
ENSCHIG00000025070	SPEN	73	81.765	ENSGACG00000001176	si:ch1073-335m2.2	81	81.765	Gasterosteus_aculeatus
ENSCHIG00000025070	SPEN	97	46.272	ENSGACG00000005341	-	99	46.264	Gasterosteus_aculeatus
ENSCHIG00000025070	SPEN	97	97.065	ENSGAGG00000020785	SPEN	100	97.065	Gopherus_agassizii
ENSCHIG00000025070	SPEN	100	87.337	ENSGGOG00000012041	SPEN	100	87.384	Gorilla_gorilla
ENSCHIG00000025070	SPEN	96	81.461	ENSHBUG00000020626	-	99	45.590	Haplochromis_burtoni
ENSCHIG00000025070	SPEN	78	84.795	ENSHBUG00000023253	si:ch1073-335m2.2	85	84.795	Haplochromis_burtoni
ENSCHIG00000025070	SPEN	100	81.351	ENSHGLG00000019259	SPEN	100	81.159	Heterocephalus_glaber_female
ENSCHIG00000025070	SPEN	89	84.599	ENSHGLG00100019294	SPEN	95	85.189	Heterocephalus_glaber_male
ENSCHIG00000025070	SPEN	74	81.250	ENSHCOG00000006004	si:ch1073-335m2.2	84	81.250	Hippocampus_comes
ENSCHIG00000025070	SPEN	97	82.778	ENSIPUG00000021668	spen	87	81.967	Ictalurus_punctatus
ENSCHIG00000025070	SPEN	77	77.841	ENSIPUG00000018212	si:ch1073-335m2.2	83	77.841	Ictalurus_punctatus
ENSCHIG00000025070	SPEN	99	86.320	ENSSTOG00000021428	SPEN	100	86.868	Ictidomys_tridecemlineatus
ENSCHIG00000025070	SPEN	100	82.374	ENSJJAG00000010882	Spen	100	82.865	Jaculus_jaculus
ENSCHIG00000025070	SPEN	64	66.245	ENSKMAG00000021725	si:ch1073-335m2.2	67	66.245	Kryptolebias_marmoratus
ENSCHIG00000025070	SPEN	74	77.049	ENSLBEG00000020855	si:ch1073-335m2.2	81	77.049	Labrus_bergylta
ENSCHIG00000025070	SPEN	82	41.102	ENSLBEG00000019129	-	87	41.792	Labrus_bergylta
ENSCHIG00000025070	SPEN	97	63.141	ENSLACG00000003258	SPEN	99	63.166	Latimeria_chalumnae
ENSCHIG00000025070	SPEN	100	51.923	ENSLOCG00000007896	si:ch1073-335m2.2	99	54.144	Lepisosteus_oculatus
ENSCHIG00000025070	SPEN	99	87.158	ENSLAFG00000004524	SPEN	100	87.077	Loxodonta_africana
ENSCHIG00000025070	SPEN	100	86.914	ENSMFAG00000041974	SPEN	100	87.151	Macaca_fascicularis
ENSCHIG00000025070	SPEN	100	86.914	ENSMMUG00000008026	SPEN	100	87.151	Macaca_mulatta
ENSCHIG00000025070	SPEN	100	86.914	ENSMNEG00000042402	SPEN	100	87.178	Macaca_nemestrina
ENSCHIG00000025070	SPEN	100	86.670	ENSMLEG00000039293	SPEN	99	86.636	Mandrillus_leucophaeus
ENSCHIG00000025070	SPEN	87	42.011	ENSMZEG00005021491	-	98	42.300	Maylandia_zebra
ENSCHIG00000025070	SPEN	75	84.795	ENSMZEG00005011762	si:ch1073-335m2.2	85	84.795	Maylandia_zebra
ENSCHIG00000025070	SPEN	100	79.192	ENSMAUG00000008318	Spen	100	79.176	Mesocricetus_auratus
ENSCHIG00000025070	SPEN	100	88.335	ENSMICG00000030994	SPEN	100	88.137	Microcebus_murinus
ENSCHIG00000025070	SPEN	100	81.404	ENSMOCG00000016083	Spen	100	81.546	Microtus_ochrogaster
ENSCHIG00000025070	SPEN	79	81.006	ENSMMOG00000021742	si:ch1073-335m2.2	85	81.006	Mola_mola
ENSCHIG00000025070	SPEN	97	70.778	ENSMODG00000003411	SPEN	100	70.742	Monodelphis_domestica
ENSCHIG00000025070	SPEN	98	82.022	ENSMALG00000008625	-	100	46.875	Monopterus_albus
ENSCHIG00000025070	SPEN	100	79.628	MGP_CAROLIEiJ_G0026745	Spen	100	79.901	Mus_caroli
ENSCHIG00000025070	SPEN	100	78.988	ENSMUSG00000040761	Spen	100	79.606	Mus_musculus
ENSCHIG00000025070	SPEN	100	78.993	MGP_PahariEiJ_G0029076	Spen	100	79.299	Mus_pahari
ENSCHIG00000025070	SPEN	100	79.136	MGP_SPRETEiJ_G0027724	Spen	100	79.743	Mus_spretus
ENSCHIG00000025070	SPEN	98	88.450	ENSMPUG00000016317	SPEN	100	88.637	Mustela_putorius_furo
ENSCHIG00000025070	SPEN	94	88.532	ENSMLUG00000010144	SPEN	99	93.750	Myotis_lucifugus
ENSCHIG00000025070	SPEN	98	84.063	ENSNGAG00000000641	Spen	95	86.125	Nannospalax_galili
ENSCHIG00000025070	SPEN	83	41.788	ENSNBRG00000022090	-	99	42.011	Neolamprologus_brichardi
ENSCHIG00000025070	SPEN	71	84.795	ENSNBRG00000005733	si:ch1073-335m2.2	81	84.795	Neolamprologus_brichardi
ENSCHIG00000025070	SPEN	99	86.852	ENSNLEG00000007652	SPEN	99	87.009	Nomascus_leucogenys
ENSCHIG00000025070	SPEN	88	92.708	ENSMEUG00000002422	SPEN	91	92.708	Notamacropus_eugenii
ENSCHIG00000025070	SPEN	93	89.430	ENSOPRG00000015800	SPEN	93	89.430	Ochotona_princeps
ENSCHIG00000025070	SPEN	100	81.205	ENSODEG00000016644	SPEN	100	81.342	Octodon_degus
ENSCHIG00000025070	SPEN	96	47.399	ENSONIG00000006573	-	99	81.455	Oreochromis_niloticus
ENSCHIG00000025070	SPEN	99	82.396	ENSOCUG00000010840	SPEN	99	82.690	Oryctolagus_cuniculus
ENSCHIG00000025070	SPEN	54	82.456	ENSORLG00000018414	si:ch1073-335m2.2	88	64.730	Oryzias_latipes
ENSCHIG00000025070	SPEN	83	77.228	ENSORLG00000028894	-	86	77.228	Oryzias_latipes
ENSCHIG00000025070	SPEN	62	82.456	ENSORLG00020009351	si:ch1073-335m2.2	88	64.730	Oryzias_latipes_hni
ENSCHIG00000025070	SPEN	83	77.228	ENSORLG00020007735	-	99	77.228	Oryzias_latipes_hni
ENSCHIG00000025070	SPEN	90	54.274	ENSORLG00015022085	-	92	46.941	Oryzias_latipes_hsok
ENSCHIG00000025070	SPEN	71	74.595	ENSORLG00015005537	si:ch1073-335m2.2	86	64.854	Oryzias_latipes_hsok
ENSCHIG00000025070	SPEN	73	68.807	ENSOMEG00000004509	si:ch1073-335m2.2	87	68.807	Oryzias_melastigma
ENSCHIG00000025070	SPEN	93	77.612	ENSOMEG00000007639	-	78	77.612	Oryzias_melastigma
ENSCHIG00000025070	SPEN	100	87.578	ENSOGAG00000025110	SPEN	100	87.388	Otolemur_garnettii
ENSCHIG00000025070	SPEN	99	98.438	ENSOARG00000008477	SPEN	99	98.438	Ovis_aries
ENSCHIG00000025070	SPEN	99	87.192	ENSPPAG00000035690	SPEN	100	87.240	Pan_paniscus
ENSCHIG00000025070	SPEN	100	87.262	ENSPTRG00000000210	SPEN	100	87.310	Pan_troglodytes
ENSCHIG00000025070	SPEN	100	85.935	ENSPANG00000006293	SPEN	100	85.873	Papio_anubis
ENSCHIG00000025070	SPEN	87	52.126	ENSPKIG00000002617	SPEN	91	81.111	Paramormyrops_kingsleyae
ENSCHIG00000025070	SPEN	94	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	98	100.000	Paramormyrops_kingsleyae
ENSCHIG00000025070	SPEN	99	81.260	ENSPEMG00000022997	Spen	100	81.710	Peromyscus_maniculatus_bairdii
ENSCHIG00000025070	SPEN	59	85.799	ENSPFOG00000017986	si:ch1073-335m2.2	64	85.799	Poecilia_formosa
ENSCHIG00000025070	SPEN	71	85.799	ENSPLAG00000016625	si:ch1073-335m2.2	85	85.799	Poecilia_latipinna
ENSCHIG00000025070	SPEN	97	44.595	ENSPMEG00000006764	-	91	73.783	Poecilia_mexicana
ENSCHIG00000025070	SPEN	60	85.799	ENSPMEG00000002674	si:ch1073-335m2.2	64	85.799	Poecilia_mexicana
ENSCHIG00000025070	SPEN	97	44.761	ENSPREG00000010399	-	91	74.157	Poecilia_reticulata
ENSCHIG00000025070	SPEN	64	60.351	ENSPREG00000005357	si:ch1073-335m2.2	88	60.351	Poecilia_reticulata
ENSCHIG00000025070	SPEN	100	87.527	ENSPPYG00000001834	SPEN	100	87.602	Pongo_abelii
ENSCHIG00000025070	SPEN	88	89.680	ENSPCAG00000009543	SPEN	92	86.335	Procavia_capensis
ENSCHIG00000025070	SPEN	100	87.381	ENSPCOG00000021735	SPEN	100	87.170	Propithecus_coquereli
ENSCHIG00000025070	SPEN	84	95.660	ENSPVAG00000013794	SPEN	84	95.685	Pteropus_vampyrus
ENSCHIG00000025070	SPEN	96	81.461	ENSPNYG00000012379	-	99	45.568	Pundamilia_nyererei
ENSCHIG00000025070	SPEN	75	84.795	ENSPNYG00000009042	si:ch1073-335m2.2	85	84.795	Pundamilia_nyererei
ENSCHIG00000025070	SPEN	78	76.316	ENSPNAG00000011452	si:ch1073-335m2.2	85	70.423	Pygocentrus_nattereri
ENSCHIG00000025070	SPEN	97	84.181	ENSPNAG00000020795	spen	86	78.195	Pygocentrus_nattereri
ENSCHIG00000025070	SPEN	99	79.608	ENSRNOG00000033556	Spen	100	79.757	Rattus_norvegicus
ENSCHIG00000025070	SPEN	99	87.359	ENSRBIG00000039654	SPEN	100	87.435	Rhinopithecus_bieti
ENSCHIG00000025070	SPEN	99	87.029	ENSRROG00000035686	SPEN	100	87.089	Rhinopithecus_roxellana
ENSCHIG00000025070	SPEN	99	84.901	ENSSBOG00000028770	SPEN	99	88.750	Saimiri_boliviensis_boliviensis
ENSCHIG00000025070	SPEN	93	90.230	ENSSFOG00015010267	si:ch1073-335m2.2	89	54.385	Scleropages_formosus
ENSCHIG00000025070	SPEN	84	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	84	65.741	Scleropages_formosus
ENSCHIG00000025070	SPEN	62	67.500	ENSSMAG00000000125	si:ch1073-335m2.2	65	67.500	Scophthalmus_maximus
ENSCHIG00000025070	SPEN	98	82.022	ENSSMAG00000008996	-	89	49.362	Scophthalmus_maximus
ENSCHIG00000025070	SPEN	66	75.500	ENSSDUG00000008416	si:ch1073-335m2.2	65	75.622	Seriola_dumerili
ENSCHIG00000025070	SPEN	89	82.584	ENSSDUG00000003476	-	91	75.836	Seriola_dumerili
ENSCHIG00000025070	SPEN	78	75.124	ENSSLDG00000023347	si:ch1073-335m2.2	84	75.124	Seriola_lalandi_dorsalis
ENSCHIG00000025070	SPEN	98	82.584	ENSSLDG00000012950	-	91	75.836	Seriola_lalandi_dorsalis
ENSCHIG00000025070	SPEN	86	66.740	ENSSPUG00000001866	-	100	66.777	Sphenodon_punctatus
ENSCHIG00000025070	SPEN	82	84.795	ENSSPAG00000012454	si:ch1073-335m2.2	89	84.795	Stegastes_partitus
ENSCHIG00000025070	SPEN	98	81.461	ENSSPAG00000006014	-	91	74.906	Stegastes_partitus
ENSCHIG00000025070	SPEN	86	91.579	ENSSSCG00000034484	SPEN	99	91.388	Sus_scrofa
ENSCHIG00000025070	SPEN	98	44.776	ENSTRUG00000024350	-	99	45.677	Takifugu_rubripes
ENSCHIG00000025070	SPEN	62	80.791	ENSTRUG00000021008	si:ch1073-335m2.2	59	80.791	Takifugu_rubripes
ENSCHIG00000025070	SPEN	73	83.041	ENSTNIG00000014666	si:ch1073-335m2.2	50	83.041	Tetraodon_nigroviridis
ENSCHIG00000025070	SPEN	93	77.245	ENSTNIG00000010907	-	99	77.559	Tetraodon_nigroviridis
ENSCHIG00000025070	SPEN	77	94.860	ENSTBEG00000003628	SPEN	77	94.860	Tupaia_belangeri
ENSCHIG00000025070	SPEN	79	98.017	ENSTTRG00000015704	SPEN	79	98.017	Tursiops_truncatus
ENSCHIG00000025070	SPEN	100	90.076	ENSUAMG00000009600	SPEN	100	89.967	Ursus_americanus
ENSCHIG00000025070	SPEN	100	88.187	ENSUMAG00000021641	SPEN	100	88.079	Ursus_maritimus
ENSCHIG00000025070	SPEN	96	100.000	ENSVVUG00000028951	SPEN	99	100.000	Vulpes_vulpes
ENSCHIG00000025070	SPEN	97	57.761	ENSXETG00000023114	SPEN	99	57.790	Xenopus_tropicalis
ENSCHIG00000025070	SPEN	71	60.137	ENSXCOG00000004516	si:ch1073-335m2.2	86	60.137	Xiphophorus_couchianus
ENSCHIG00000025070	SPEN	97	44.588	ENSXMAG00000021384	-	90	72.453	Xiphophorus_maculatus
ENSCHIG00000025070	SPEN	76	60.000	ENSXMAG00000029887	si:ch1073-335m2.2	90	60.000	Xiphophorus_maculatus