EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000025346 (Gene tree)
Gene ID: -
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 2754 bases
Position: chr15:6332567-6335320
Accession: 106502916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000030669	zf-C2H2	PF00096.26	1.7e-39	1	7
ENSCHIP00000030669	zf-C2H2	PF00096.26	1.7e-39	2	7
ENSCHIP00000030669	zf-C2H2	PF00096.26	1.7e-39	3	7
ENSCHIP00000030669	zf-C2H2	PF00096.26	1.7e-39	4	7
ENSCHIP00000030669	zf-C2H2	PF00096.26	1.7e-39	5	7
ENSCHIP00000030669	zf-C2H2	PF00096.26	1.7e-39	6	7
ENSCHIP00000030669	zf-C2H2	PF00096.26	1.7e-39	7	7
ENSCHIP00000030669	zf-met	PF12874.7	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000038541	ZNF408-201	1830	XM_018059138	ENSCHIP00000030669	609 (aa)	XP_017914627	UPI000D18ECBB

Gene Model

Click here to download ENSCHIG00000025346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000025346	ZNF408	50	38.182	ENSCHIG00000027072	ZNF112	75	38.182
ENSCHIG00000025346	ZNF408	53	39.073	ENSCHIG00000008992	-	92	39.568
ENSCHIG00000025346	ZNF408	58	38.816	ENSCHIG00000027113	ZNF699	77	41.727
ENSCHIG00000025346	ZNF408	55	38.222	ENSCHIG00000014415	ZNF81	70	38.222
ENSCHIG00000025346	ZNF408	57	32.342	ENSCHIG00000003371	ZNF319	81	32.302
ENSCHIG00000025346	ZNF408	54	40.647	ENSCHIG00000014937	ZNF235	68	40.647
ENSCHIG00000025346	ZNF408	51	38.889	ENSCHIG00000020931	-	80	38.739
ENSCHIG00000025346	ZNF408	52	39.200	ENSCHIG00000016562	-	73	39.200
ENSCHIG00000025346	ZNF408	64	37.634	ENSCHIG00000015369	ZNF317	76	39.912
ENSCHIG00000025346	ZNF408	50	41.463	ENSCHIG00000015741	-	86	42.105
ENSCHIG00000025346	ZNF408	54	45.349	ENSCHIG00000020779	-	81	45.349
ENSCHIG00000025346	ZNF408	58	40.506	ENSCHIG00000000391	ZNF236	62	40.506
ENSCHIG00000025346	ZNF408	51	37.059	ENSCHIG00000018756	ZNF526	77	30.032
ENSCHIG00000025346	ZNF408	50	44.037	ENSCHIG00000022075	ZNF628	64	33.460
ENSCHIG00000025346	ZNF408	50	39.419	ENSCHIG00000015070	ZNF226	73	39.419
ENSCHIG00000025346	ZNF408	57	35.943	ENSCHIG00000026481	-	85	37.410
ENSCHIG00000025346	ZNF408	67	36.145	ENSCHIG00000015281	ZFP1	61	45.349
ENSCHIG00000025346	ZNF408	56	30.311	ENSCHIG00000009605	ZNF574	71	38.158
ENSCHIG00000025346	ZNF408	70	37.450	ENSCHIG00000018772	PRDM5	85	37.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025346	ZNF408	97	77.852	ENSG00000175213	ZNF408	82	77.852	Homo_sapiens
ENSCHIG00000025346	ZNF408	97	79.496	ENSAMEG00000006904	ZNF408	82	79.160	Ailuropoda_melanoleuca
ENSCHIG00000025346	ZNF408	97	78.188	ENSANAG00000036294	ZNF408	90	78.020	Aotus_nancymaae
ENSCHIG00000025346	ZNF408	58	54.707	ENSAMXG00000032642	znf408	55	54.453	Astyanax_mexicanus
ENSCHIG00000025346	ZNF408	97	77.852	ENSCJAG00000019859	ZNF408	82	77.852	Callithrix_jacchus
ENSCHIG00000025346	ZNF408	97	79.500	ENSCAFG00000009143	ZNF408	80	79.167	Canis_familiaris
ENSCHIG00000025346	ZNF408	97	79.500	ENSCAFG00020019155	ZNF408	80	79.167	Canis_lupus_dingo
ENSCHIG00000025346	ZNF408	97	74.790	ENSTSYG00000025443	ZNF408	82	75.671	Carlito_syrichta
ENSCHIG00000025346	ZNF408	97	77.685	ENSCCAG00000029472	ZNF408	82	77.685	Cebus_capucinus
ENSCHIG00000025346	ZNF408	61	93.772	ENSCHOG00000009909	ZNF408	70	93.772	Choloepus_hoffmanni
ENSCHIG00000025346	ZNF408	97	66.555	ENSCGRG00001023588	Zfp408	82	67.057	Cricetulus_griseus_chok1gshd
ENSCHIG00000025346	ZNF408	97	66.555	ENSCGRG00000017618	Zfp408	82	67.057	Cricetulus_griseus_crigri
ENSCHIG00000025346	ZNF408	96	74.118	ENSDNOG00000047669	ZNF408	82	74.454	Dasypus_novemcinctus
ENSCHIG00000025346	ZNF408	95	69.231	ENSDORG00000000387	Zfp408	88	68.601	Dipodomys_ordii
ENSCHIG00000025346	ZNF408	84	66.972	ENSETEG00000017621	-	79	68.337	Echinops_telfairi
ENSCHIG00000025346	ZNF408	97	78.523	ENSEASG00005015461	ZNF408	82	78.523	Equus_asinus_asinus
ENSCHIG00000025346	ZNF408	97	78.859	ENSECAG00000010878	ZNF408	84	78.109	Equus_caballus
ENSCHIG00000025346	ZNF408	96	69.412	ENSEEUG00000010466	ZNF408	81	69.412	Erinaceus_europaeus
ENSCHIG00000025346	ZNF408	97	80.537	ENSFCAG00000029105	ZNF408	82	80.201	Felis_catus
ENSCHIG00000025346	ZNF408	59	45.610	ENSGAFG00000018557	-	58	45.610	Gambusia_affinis
ENSCHIG00000025346	ZNF408	97	77.852	ENSGGOG00000010152	ZNF408	82	77.852	Gorilla_gorilla
ENSCHIG00000025346	ZNF408	97	75.503	ENSLAFG00000027848	ZNF408	96	75.336	Loxodonta_africana
ENSCHIG00000025346	ZNF408	97	78.859	ENSMICG00000045320	ZNF408	82	78.691	Microcebus_murinus
ENSCHIG00000025346	ZNF408	84	53.351	ENSMODG00000019895	-	79	53.457	Monodelphis_domestica
ENSCHIG00000025346	ZNF408	97	79.832	ENSMPUG00000005490	ZNF408	82	79.496	Mustela_putorius_furo
ENSCHIG00000025346	ZNF408	97	68.289	ENSNGAG00000000309	Zfp408	82	68.456	Nannospalax_galili
ENSCHIG00000025346	ZNF408	97	77.013	ENSNLEG00000014132	ZNF408	82	77.013	Nomascus_leucogenys
ENSCHIG00000025346	ZNF408	90	65.950	ENSOPRG00000009225	ZNF408	77	65.950	Ochotona_princeps
ENSCHIG00000025346	ZNF408	97	74.329	ENSOCUG00000010953	ZNF408	83	73.445	Oryctolagus_cuniculus
ENSCHIG00000025346	ZNF408	97	76.807	ENSOGAG00000034080	ZNF408	96	76.807	Otolemur_garnettii
ENSCHIG00000025346	ZNF408	97	78.020	ENSPPAG00000034993	ZNF408	82	78.020	Pan_paniscus
ENSCHIG00000025346	ZNF408	97	80.034	ENSPPRG00000016866	ZNF408	82	79.698	Panthera_pardus
ENSCHIG00000025346	ZNF408	97	80.872	ENSPTIG00000015467	ZNF408	82	80.537	Panthera_tigris_altaica
ENSCHIG00000025346	ZNF408	97	78.356	ENSPTRG00000003551	ZNF408	82	78.356	Pan_troglodytes
ENSCHIG00000025346	ZNF408	87	70.377	ENSPEMG00000016757	Zfp408	94	70.245	Peromyscus_maniculatus_bairdii
ENSCHIG00000025346	ZNF408	61	48.819	ENSPFOG00000001760	-	92	48.819	Poecilia_formosa
ENSCHIG00000025346	ZNF408	61	49.333	ENSPMEG00000021147	-	72	49.333	Poecilia_mexicana
ENSCHIG00000025346	ZNF408	61	45.585	ENSPREG00000017068	-	60	45.585	Poecilia_reticulata
ENSCHIG00000025346	ZNF408	97	76.007	ENSPPYG00000003318	ZNF408	98	76.007	Pongo_abelii
ENSCHIG00000025346	ZNF408	97	73.826	ENSPCAG00000014001	ZNF408	82	73.658	Procavia_capensis
ENSCHIG00000025346	ZNF408	97	79.062	ENSPCOG00000028698	ZNF408	82	78.727	Propithecus_coquereli
ENSCHIG00000025346	ZNF408	97	79.195	ENSPVAG00000015791	ZNF408	82	78.859	Pteropus_vampyrus
ENSCHIG00000025346	ZNF408	97	75.798	ENSSBOG00000033023	ZNF408	82	76.342	Saimiri_boliviensis_boliviensis
ENSCHIG00000025346	ZNF408	97	80.872	ENSSSCG00000023097	ZNF408	80	80.000	Sus_scrofa
ENSCHIG00000025346	ZNF408	72	86.873	ENSTBEG00000004260	ZNF408	61	86.873	Tupaia_belangeri
ENSCHIG00000025346	ZNF408	97	79.832	ENSUAMG00000026154	ZNF408	82	79.496	Ursus_americanus
ENSCHIG00000025346	ZNF408	97	79.496	ENSUMAG00000014405	ZNF408	82	79.160	Ursus_maritimus
ENSCHIG00000025346	ZNF408	97	79.800	ENSVVUG00000026805	ZNF408	80	79.299	Vulpes_vulpes
ENSCHIG00000025346	ZNF408	60	55.409	ENSXETG00000001980	znf408	100	54.354	Xenopus_tropicalis
ENSCHIG00000025346	ZNF408	61	49.333	ENSXCOG00000002869	-	75	47.409	Xiphophorus_couchianus
ENSCHIG00000025346	ZNF408	61	48.930	ENSXMAG00000018347	-	72	48.930	Xiphophorus_maculatus