EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000025663 (Gene tree)
Gene ID: 102170653
Gene Symbol: -
Alias: -
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 3425 bases
Position: chr3:99481850-99485274
Accession: 102170653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000031211	RRM_1	PF00076.22	3.6e-39	1	2
ENSCHIP00000031211	RRM_1	PF00076.22	3.6e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039083	-	1275	XM_018046026	ENSCHIP00000031211	424 (aa)	XP_017901515	UPI00004F1A2C

Gene Model

Click here to download ENSCHIG00000025663's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000025663	-	70	39.344	ENSCHIG00000023714	PABPC1	88	39.344
ENSCHIG00000025663	-	56	40.526	ENSCHIG00000007231	PABPC4L	99	40.526
ENSCHIG00000025663	-	54	36.508	ENSCHIG00000025759	PABPC1L	56	36.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025663	-	100	99.764	ENSG00000143368	SF3B4	100	100.000	Homo_sapiens
ENSCHIG00000025663	-	57	96.667	ENSAPOG00000017647	sf3b4	77	80.564	Acanthochromis_polyacanthus
ENSCHIG00000025663	-	100	100.000	ENSAMEG00000010073	SF3B4	100	100.000	Ailuropoda_melanoleuca
ENSCHIG00000025663	-	57	96.667	ENSAOCG00000019801	sf3b4	77	80.564	Amphiprion_ocellaris
ENSCHIG00000025663	-	57	96.667	ENSAPEG00000010365	sf3b4	77	80.564	Amphiprion_percula
ENSCHIG00000025663	-	57	96.250	ENSATEG00000012844	sf3b4	60	96.250	Anabas_testudineus
ENSCHIG00000025663	-	62	96.198	ENSACAG00000010019	SF3B4	90	90.078	Anolis_carolinensis
ENSCHIG00000025663	-	100	99.764	ENSANAG00000031025	SF3B4	100	99.764	Aotus_nancymaae
ENSCHIG00000025663	-	57	95.833	ENSACLG00000014260	sf3b4	76	81.505	Astatotilapia_calliptera
ENSCHIG00000025663	-	57	96.250	ENSAMXG00000008282	sf3b4	60	96.250	Astyanax_mexicanus
ENSCHIG00000025663	-	91	96.615	ENSBTAG00000012793	-	93	96.615	Bos_taurus
ENSCHIG00000025663	-	100	100.000	ENSBTAG00000012495	SF3B4	100	100.000	Bos_taurus
ENSCHIG00000025663	-	90	82.131	ENSCJAG00000042351	SF3B4	87	82.131	Callithrix_jacchus
ENSCHIG00000025663	-	100	99.528	ENSCAFG00000011617	SF3B4	100	99.528	Canis_familiaris
ENSCHIG00000025663	-	100	99.528	ENSCAFG00020019775	SF3B4	100	99.528	Canis_lupus_dingo
ENSCHIG00000025663	-	100	99.764	ENSTSYG00000009295	SF3B4	100	99.764	Carlito_syrichta
ENSCHIG00000025663	-	100	99.764	ENSCPOG00000008267	SF3B4	100	99.764	Cavia_porcellus
ENSCHIG00000025663	-	95	85.572	ENSCCAG00000019823	-	77	86.503	Cebus_capucinus
ENSCHIG00000025663	-	100	86.985	ENSCCAG00000021751	-	69	92.901	Cebus_capucinus
ENSCHIG00000025663	-	100	99.764	ENSCATG00000033114	SF3B4	100	99.764	Cercocebus_atys
ENSCHIG00000025663	-	100	99.764	ENSCLAG00000015851	SF3B4	100	99.764	Chinchilla_lanigera
ENSCHIG00000025663	-	100	99.764	ENSCSAG00000018129	SF3B4	100	99.764	Chlorocebus_sabaeus
ENSCHIG00000025663	-	99	86.085	ENSCPBG00000008041	SF3B4	91	90.885	Chrysemys_picta_bellii
ENSCHIG00000025663	-	51	90.698	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSCHIG00000025663	-	100	99.764	ENSCANG00000035579	SF3B4	100	99.764	Colobus_angolensis_palliatus
ENSCHIG00000025663	-	100	99.764	ENSCGRG00001003590	Sf3b4	100	99.764	Cricetulus_griseus_chok1gshd
ENSCHIG00000025663	-	100	99.764	ENSCGRG00000016914	Sf3b4	100	99.764	Cricetulus_griseus_crigri
ENSCHIG00000025663	-	57	96.250	ENSDARG00000018574	sf3b4	77	79.310	Danio_rerio
ENSCHIG00000025663	-	97	81.114	ENSDNOG00000037231	-	76	82.109	Dasypus_novemcinctus
ENSCHIG00000025663	-	98	97.115	ENSDNOG00000048908	-	99	97.115	Dasypus_novemcinctus
ENSCHIG00000025663	-	100	100.000	ENSDORG00000016366	Sf3b4	100	100.000	Dipodomys_ordii
ENSCHIG00000025663	-	76	92.901	ENSETEG00000008963	SF3B4	76	92.901	Echinops_telfairi
ENSCHIG00000025663	-	100	100.000	ENSEASG00005001477	SF3B4	100	100.000	Equus_asinus_asinus
ENSCHIG00000025663	-	100	100.000	ENSECAG00000024737	SF3B4	100	100.000	Equus_caballus
ENSCHIG00000025663	-	100	100.000	ENSFCAG00000010106	SF3B4	100	100.000	Felis_catus
ENSCHIG00000025663	-	100	99.764	ENSFDAG00000009286	SF3B4	100	99.764	Fukomys_damarensis
ENSCHIG00000025663	-	54	96.957	ENSGMOG00000002519	sf3b4	67	97.368	Gadus_morhua
ENSCHIG00000025663	-	99	89.362	ENSGALG00000013352	SF3B4	90	89.817	Gallus_gallus
ENSCHIG00000025663	-	63	92.453	ENSGAFG00000010181	sf3b4	58	97.807	Gambusia_affinis
ENSCHIG00000025663	-	99	85.849	ENSGAGG00000025055	SF3B4	79	90.625	Gopherus_agassizii
ENSCHIG00000025663	-	100	99.764	ENSGGOG00000004761	SF3B4	100	99.764	Gorilla_gorilla
ENSCHIG00000025663	-	100	73.585	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSCHIG00000025663	-	57	95.833	ENSHBUG00000002028	sf3b4	76	81.505	Haplochromis_burtoni
ENSCHIG00000025663	-	100	99.764	ENSHGLG00000012360	SF3B4	100	99.764	Heterocephalus_glaber_female
ENSCHIG00000025663	-	100	98.585	ENSHGLG00100008533	SF3B4	100	98.585	Heterocephalus_glaber_male
ENSCHIG00000025663	-	57	96.667	ENSIPUG00000012242	Sf3b4	60	96.667	Ictalurus_punctatus
ENSCHIG00000025663	-	100	100.000	ENSSTOG00000000684	-	100	100.000	Ictidomys_tridecemlineatus
ENSCHIG00000025663	-	76	84.483	ENSJJAG00000022500	Sf3b4	95	84.483	Jaculus_jaculus
ENSCHIG00000025663	-	56	96.203	ENSKMAG00000008154	sf3b4	58	98.246	Kryptolebias_marmoratus
ENSCHIG00000025663	-	55	97.425	ENSLBEG00000026818	sf3b4	57	98.246	Labrus_bergylta
ENSCHIG00000025663	-	57	95.473	ENSLACG00000004436	SF3B4	87	85.625	Latimeria_chalumnae
ENSCHIG00000025663	-	57	95.885	ENSLOCG00000009048	sf3b4	75	85.580	Lepisosteus_oculatus
ENSCHIG00000025663	-	100	99.529	ENSLAFG00000008531	SF3B4	100	99.529	Loxodonta_africana
ENSCHIG00000025663	-	100	99.764	ENSMFAG00000042395	SF3B4	100	99.764	Macaca_fascicularis
ENSCHIG00000025663	-	92	71.066	ENSMFAG00000039067	-	57	80.930	Macaca_fascicularis
ENSCHIG00000025663	-	100	99.764	ENSMMUG00000007256	SF3B4	100	99.764	Macaca_mulatta
ENSCHIG00000025663	-	100	99.764	ENSMNEG00000031839	SF3B4	100	99.764	Macaca_nemestrina
ENSCHIG00000025663	-	92	70.558	ENSMNEG00000031526	-	57	80.465	Macaca_nemestrina
ENSCHIG00000025663	-	100	99.764	ENSMLEG00000038667	SF3B4	100	99.764	Mandrillus_leucophaeus
ENSCHIG00000025663	-	57	97.083	ENSMAMG00000014692	sf3b4	60	97.083	Mastacembelus_armatus
ENSCHIG00000025663	-	57	95.833	ENSMZEG00005026741	sf3b4	76	81.505	Maylandia_zebra
ENSCHIG00000025663	-	99	87.943	ENSMGAG00000000653	SF3B4	91	89.556	Meleagris_gallopavo
ENSCHIG00000025663	-	100	99.764	ENSMAUG00000015266	Sf3b4	100	99.764	Mesocricetus_auratus
ENSCHIG00000025663	-	100	100.000	ENSMICG00000044961	SF3B4	100	100.000	Microcebus_murinus
ENSCHIG00000025663	-	100	99.764	ENSMOCG00000013658	-	100	99.764	Microtus_ochrogaster
ENSCHIG00000025663	-	98	94.699	ENSMOCG00000014155	-	100	94.699	Microtus_ochrogaster
ENSCHIG00000025663	-	54	97.826	ENSMMOG00000018032	sf3b4	58	97.807	Mola_mola
ENSCHIG00000025663	-	100	99.292	ENSMODG00000018767	SF3B4	100	99.292	Monodelphis_domestica
ENSCHIG00000025663	-	54	97.797	ENSMALG00000006174	sf3b4	57	97.368	Monopterus_albus
ENSCHIG00000025663	-	100	99.528	MGP_CAROLIEiJ_G0025365	Sf3b4	100	99.528	Mus_caroli
ENSCHIG00000025663	-	100	99.764	ENSMUSG00000068856	Sf3b4	100	99.764	Mus_musculus
ENSCHIG00000025663	-	100	99.764	MGP_PahariEiJ_G0026809	Sf3b4	100	99.764	Mus_pahari
ENSCHIG00000025663	-	100	99.764	MGP_SPRETEiJ_G0026309	Sf3b4	100	99.764	Mus_spretus
ENSCHIG00000025663	-	100	100.000	ENSMPUG00000005563	SF3B4	100	100.000	Mustela_putorius_furo
ENSCHIG00000025663	-	100	99.764	ENSMLUG00000010789	SF3B4	100	99.764	Myotis_lucifugus
ENSCHIG00000025663	-	100	99.528	ENSNGAG00000016337	Sf3b4	100	99.528	Nannospalax_galili
ENSCHIG00000025663	-	57	96.250	ENSNBRG00000013865	sf3b4	76	81.818	Neolamprologus_brichardi
ENSCHIG00000025663	-	100	70.093	ENSNLEG00000009693	-	100	70.093	Nomascus_leucogenys
ENSCHIG00000025663	-	100	76.651	ENSNLEG00000000537	-	82	84.877	Nomascus_leucogenys
ENSCHIG00000025663	-	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSCHIG00000025663	-	99	97.387	ENSOPRG00000010808	SF3B4	99	97.387	Ochotona_princeps
ENSCHIG00000025663	-	75	87.066	ENSODEG00000003597	-	79	87.066	Octodon_degus
ENSCHIG00000025663	-	56	95.359	ENSONIG00000002730	sf3b4	57	97.807	Oreochromis_niloticus
ENSCHIG00000025663	-	99	58.140	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSCHIG00000025663	-	100	100.000	ENSOCUG00000004614	SF3B4	100	100.000	Oryctolagus_cuniculus
ENSCHIG00000025663	-	55	96.983	ENSORLG00000003062	sf3b4	59	97.807	Oryzias_latipes
ENSCHIG00000025663	-	100	100.000	ENSOGAG00000006265	SF3B4	100	100.000	Otolemur_garnettii
ENSCHIG00000025663	-	86	78.846	ENSOARG00000007368	-	77	79.688	Ovis_aries
ENSCHIG00000025663	-	100	100.000	ENSOARG00000020718	-	100	100.000	Ovis_aries
ENSCHIG00000025663	-	100	81.840	ENSPPAG00000030024	-	78	82.716	Pan_paniscus
ENSCHIG00000025663	-	100	99.764	ENSPPAG00000040904	SF3B4	100	99.764	Pan_paniscus
ENSCHIG00000025663	-	100	100.000	ENSPPRG00000007384	SF3B4	100	100.000	Panthera_pardus
ENSCHIG00000025663	-	100	99.528	ENSPTIG00000014530	SF3B4	100	99.528	Panthera_tigris_altaica
ENSCHIG00000025663	-	100	99.764	ENSPTRG00000001243	SF3B4	100	99.764	Pan_troglodytes
ENSCHIG00000025663	-	100	79.009	ENSPTRG00000049727	-	59	90.254	Pan_troglodytes
ENSCHIG00000025663	-	100	99.764	ENSPANG00000005126	SF3B4	100	99.764	Papio_anubis
ENSCHIG00000025663	-	55	97.425	ENSPKIG00000020669	sf3b4	60	98.246	Paramormyrops_kingsleyae
ENSCHIG00000025663	-	66	75.714	ENSPSIG00000009565	SF3B4	68	98.378	Pelodiscus_sinensis
ENSCHIG00000025663	-	100	99.764	ENSPEMG00000017568	Sf3b4	100	99.764	Peromyscus_maniculatus_bairdii
ENSCHIG00000025663	-	61	88.716	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSCHIG00000025663	-	100	99.292	ENSPCIG00000008765	SF3B4	100	99.292	Phascolarctos_cinereus
ENSCHIG00000025663	-	64	90.476	ENSPFOG00000005754	sf3b4	58	97.368	Poecilia_formosa
ENSCHIG00000025663	-	64	90.476	ENSPLAG00000001401	sf3b4	63	97.368	Poecilia_latipinna
ENSCHIG00000025663	-	64	90.476	ENSPREG00000011076	sf3b4	57	97.807	Poecilia_reticulata
ENSCHIG00000025663	-	63	96.635	ENSPCAG00000000392	SF3B4	63	96.635	Procavia_capensis
ENSCHIG00000025663	-	100	100.000	ENSPCOG00000015399	SF3B4	100	100.000	Propithecus_coquereli
ENSCHIG00000025663	-	100	100.000	ENSPVAG00000014171	SF3B4	100	100.000	Pteropus_vampyrus
ENSCHIG00000025663	-	57	95.833	ENSPNYG00000012700	sf3b4	76	81.505	Pundamilia_nyererei
ENSCHIG00000025663	-	57	96.667	ENSPNAG00000000686	sf3b4	61	96.667	Pygocentrus_nattereri
ENSCHIG00000025663	-	100	99.764	ENSRNOG00000021181	Sf3b4	100	99.764	Rattus_norvegicus
ENSCHIG00000025663	-	100	99.764	ENSRBIG00000043392	SF3B4	100	99.764	Rhinopithecus_bieti
ENSCHIG00000025663	-	92	71.465	ENSRROG00000028213	-	91	67.647	Rhinopithecus_roxellana
ENSCHIG00000025663	-	100	99.764	ENSRROG00000029366	SF3B4	100	99.764	Rhinopithecus_roxellana
ENSCHIG00000025663	-	100	99.528	ENSSBOG00000012310	-	100	99.528	Saimiri_boliviensis_boliviensis
ENSCHIG00000025663	-	100	72.877	ENSSBOG00000025174	-	73	79.567	Saimiri_boliviensis_boliviensis
ENSCHIG00000025663	-	100	96.698	ENSSHAG00000004043	SF3B4	100	98.950	Sarcophilus_harrisii
ENSCHIG00000025663	-	56	96.624	ENSSFOG00015008864	sf3b4	56	98.246	Scleropages_formosus
ENSCHIG00000025663	-	57	96.667	ENSSMAG00000006837	sf3b4	60	96.667	Scophthalmus_maximus
ENSCHIG00000025663	-	57	97.083	ENSSDUG00000012064	sf3b4	60	97.083	Seriola_dumerili
ENSCHIG00000025663	-	57	97.083	ENSSLDG00000014226	sf3b4	60	97.083	Seriola_lalandi_dorsalis
ENSCHIG00000025663	-	72	95.102	ENSSPUG00000001028	SF3B4	57	98.684	Sphenodon_punctatus
ENSCHIG00000025663	-	57	97.500	ENSSPAG00000019219	sf3b4	60	97.500	Stegastes_partitus
ENSCHIG00000025663	-	85	66.298	ENSSSCG00000039440	-	79	65.741	Sus_scrofa
ENSCHIG00000025663	-	100	99.764	ENSSSCG00000006665	-	100	99.764	Sus_scrofa
ENSCHIG00000025663	-	56	97.034	ENSTGUG00000004470	SF3B4	90	98.246	Taeniopygia_guttata
ENSCHIG00000025663	-	54	96.916	ENSTRUG00000004516	sf3b4	57	96.491	Takifugu_rubripes
ENSCHIG00000025663	-	100	100.000	ENSTTRG00000005217	SF3B4	100	100.000	Tursiops_truncatus
ENSCHIG00000025663	-	100	100.000	ENSUAMG00000022468	SF3B4	100	100.000	Ursus_americanus
ENSCHIG00000025663	-	100	99.057	ENSUMAG00000003802	SF3B4	100	99.057	Ursus_maritimus
ENSCHIG00000025663	-	97	100.000	ENSVPAG00000008152	SF3B4	100	100.000	Vicugna_pacos
ENSCHIG00000025663	-	65	96.377	ENSVVUG00000022697	-	58	96.377	Vulpes_vulpes
ENSCHIG00000025663	-	99	92.823	ENSVVUG00000007732	-	100	92.823	Vulpes_vulpes
ENSCHIG00000025663	-	54	97.391	ENSXCOG00000019895	sf3b4	58	97.807	Xiphophorus_couchianus
ENSCHIG00000025663	-	54	97.391	ENSXMAG00000003772	sf3b4	58	97.807	Xiphophorus_maculatus