EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000025709 (Gene tree)
Gene ID: 102176886
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 36220 bases
Position: chr10:79463930-79500149
Accession: 102176886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000031303	RRM_1	PF00076.22	1.3e-34	1	2
ENSCHIP00000031303	RRM_1	PF00076.22	1.3e-34	2	2
ENSCHIP00000031334	RRM_1	PF00076.22	1.3e-34	1	2
ENSCHIP00000031334	RRM_1	PF00076.22	1.3e-34	2	2
ENSCHIP00000031324	RRM_1	PF00076.22	1.3e-34	1	2
ENSCHIP00000031324	RRM_1	PF00076.22	1.3e-34	2	2
ENSCHIP00000031283	RRM_1	PF00076.22	1.4e-34	1	2
ENSCHIP00000031283	RRM_1	PF00076.22	1.4e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000039156	RBM23-201	3387	XM_013966886	ENSCHIP00000031283	475 (aa)	XP_013822340	UPI000D18D30E
ENSCHIT00000039197	RBM23-203	1468	-	ENSCHIP00000031324	464 (aa)	-	UPI0003AFAECC
ENSCHIT00000039176	RBM23-202	1465	-	ENSCHIP00000031303	463 (aa)	-	UPI0003AFF111
ENSCHIT00000039207	RBM23-204	2791	XM_005685270	ENSCHIP00000031334	463 (aa)	XP_005685327	UPI0003AFF111

Gene Model

Click here to download ENSCHIG00000025709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000025709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000025709	RBM23	91	54.588	ENSCHIG00000014731	-	81	53.846
ENSCHIG00000025709	RBM23	66	67.913	ENSCHIG00000024884	RBM39	70	62.299

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000025709	RBM23	100	85.529	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSCHIG00000025709	RBM23	100	86.510	ENSAMEG00000007322	RBM23	100	86.938	Ailuropoda_melanoleuca
ENSCHIG00000025709	RBM23	70	81.269	ENSACAG00000001569	RBM23	96	69.296	Anolis_carolinensis
ENSCHIG00000025709	RBM23	100	65.875	ENSANAG00000033790	-	100	66.739	Aotus_nancymaae
ENSCHIG00000025709	RBM23	100	95.680	ENSBTAG00000038333	RBM23	100	95.680	Bos_taurus
ENSCHIG00000025709	RBM23	100	85.313	ENSCJAG00000008482	RBM23	100	85.745	Callithrix_jacchus
ENSCHIG00000025709	RBM23	100	82.974	ENSCAFG00000011217	RBM23	100	83.405	Canis_familiaris
ENSCHIG00000025709	RBM23	100	86.825	ENSCAFG00020007711	RBM23	100	87.041	Canis_lupus_dingo
ENSCHIG00000025709	RBM23	100	87.473	ENSTSYG00000014755	RBM23	100	92.806	Carlito_syrichta
ENSCHIG00000025709	RBM23	100	71.058	ENSCCAG00000028584	-	100	78.417	Cebus_capucinus
ENSCHIG00000025709	RBM23	100	80.562	ENSCCAG00000025114	-	100	87.257	Cebus_capucinus
ENSCHIG00000025709	RBM23	100	87.689	ENSCATG00000017832	RBM23	100	93.214	Cercocebus_atys
ENSCHIG00000025709	RBM23	100	87.473	ENSCSAG00000016213	RBM23	100	87.473	Chlorocebus_sabaeus
ENSCHIG00000025709	RBM23	69	78.997	ENSCPBG00000026096	RBM23	96	66.955	Chrysemys_picta_bellii
ENSCHIG00000025709	RBM23	74	92.733	ENSCANG00000001893	RBM23	100	81.859	Colobus_angolensis_palliatus
ENSCHIG00000025709	RBM23	100	84.665	ENSDNOG00000032457	RBM23	100	84.449	Dasypus_novemcinctus
ENSCHIG00000025709	RBM23	60	92.446	ENSDORG00000004926	-	100	92.446	Dipodomys_ordii
ENSCHIG00000025709	RBM23	96	86.547	ENSEASG00005011696	RBM23	95	86.771	Equus_asinus_asinus
ENSCHIG00000025709	RBM23	100	79.614	ENSECAG00000009910	RBM23	100	80.687	Equus_caballus
ENSCHIG00000025709	RBM23	100	83.836	ENSEEUG00000015560	RBM23	100	84.052	Erinaceus_europaeus
ENSCHIG00000025709	RBM23	100	87.257	ENSFCAG00000006632	RBM23	100	87.905	Felis_catus
ENSCHIG00000025709	RBM23	100	85.745	ENSGGOG00000015707	RBM23	100	87.257	Gorilla_gorilla
ENSCHIG00000025709	RBM23	100	77.754	ENSHGLG00100006114	RBM23	99	79.914	Heterocephalus_glaber_male
ENSCHIG00000025709	RBM23	60	92.806	ENSSTOG00000010354	RBM23	100	92.806	Ictidomys_tridecemlineatus
ENSCHIG00000025709	RBM23	100	82.289	ENSLAFG00000018567	RBM23	100	82.974	Loxodonta_africana
ENSCHIG00000025709	RBM23	100	87.905	ENSMFAG00000037595	RBM23	100	87.905	Macaca_fascicularis
ENSCHIG00000025709	RBM23	100	87.905	ENSMMUG00000018381	RBM23	100	87.905	Macaca_mulatta
ENSCHIG00000025709	RBM23	100	87.257	ENSMNEG00000042442	RBM23	100	87.041	Macaca_nemestrina
ENSCHIG00000025709	RBM23	74	89.535	ENSMLEG00000039954	RBM23	100	80.778	Mandrillus_leucophaeus
ENSCHIG00000025709	RBM23	100	86.825	ENSMICG00000006364	RBM23	100	91.727	Microcebus_murinus
ENSCHIG00000025709	RBM23	100	85.313	ENSMODG00000024448	RBM23	100	87.041	Monodelphis_domestica
ENSCHIG00000025709	RBM23	100	87.689	ENSMPUG00000007151	RBM23	100	87.905	Mustela_putorius_furo
ENSCHIG00000025709	RBM23	75	83.954	ENSMLUG00000012923	RBM23	100	78.801	Myotis_lucifugus
ENSCHIG00000025709	RBM23	100	87.905	ENSNLEG00000014792	RBM23	100	88.985	Nomascus_leucogenys
ENSCHIG00000025709	RBM23	53	97.080	ENSMEUG00000014548	-	60	97.080	Notamacropus_eugenii
ENSCHIG00000025709	RBM23	70	86.154	ENSOPRG00000001092	RBM23	100	83.801	Ochotona_princeps
ENSCHIG00000025709	RBM23	70	51.212	ENSOANG00000008908	-	100	51.212	Ornithorhynchus_anatinus
ENSCHIG00000025709	RBM23	69	91.589	ENSOCUG00000002006	RBM23	100	86.022	Oryctolagus_cuniculus
ENSCHIG00000025709	RBM23	81	86.389	ENSOGAG00000014794	RBM23	100	79.325	Otolemur_garnettii
ENSCHIG00000025709	RBM23	100	98.272	ENSOARG00000019398	RBM23	100	98.272	Ovis_aries
ENSCHIG00000025709	RBM23	100	87.689	ENSPPAG00000037922	RBM23	100	87.689	Pan_paniscus
ENSCHIG00000025709	RBM23	100	87.041	ENSPPRG00000023344	RBM23	100	87.689	Panthera_pardus
ENSCHIG00000025709	RBM23	74	93.605	ENSPTIG00000007831	RBM23	100	84.233	Panthera_tigris_altaica
ENSCHIG00000025709	RBM23	100	87.905	ENSPTRG00000006151	RBM23	100	88.337	Pan_troglodytes
ENSCHIG00000025709	RBM23	97	84.410	ENSPANG00000001324	RBM23	100	94.245	Papio_anubis
ENSCHIG00000025709	RBM23	100	85.313	ENSPCIG00000027773	RBM23	100	86.825	Phascolarctos_cinereus
ENSCHIG00000025709	RBM23	74	91.279	ENSPPYG00000005649	RBM23	100	83.369	Pongo_abelii
ENSCHIG00000025709	RBM23	100	64.579	ENSPCAG00000006669	RBM23	100	66.091	Procavia_capensis
ENSCHIG00000025709	RBM23	100	87.041	ENSPCOG00000018564	RBM23	100	92.806	Propithecus_coquereli
ENSCHIG00000025709	RBM23	100	84.449	ENSPVAG00000013785	RBM23	100	85.345	Pteropus_vampyrus
ENSCHIG00000025709	RBM23	100	87.041	ENSRBIG00000039276	RBM23	100	87.041	Rhinopithecus_bieti
ENSCHIG00000025709	RBM23	100	87.041	ENSRROG00000044026	RBM23	100	87.041	Rhinopithecus_roxellana
ENSCHIG00000025709	RBM23	100	85.627	ENSSBOG00000023037	-	100	86.544	Saimiri_boliviensis_boliviensis
ENSCHIG00000025709	RBM23	97	64.159	ENSSBOG00000034977	-	100	61.572	Saimiri_boliviensis_boliviensis
ENSCHIG00000025709	RBM23	69	90.938	ENSSHAG00000012932	RBM23	100	86.452	Sarcophilus_harrisii
ENSCHIG00000025709	RBM23	100	85.313	ENSSARG00000005165	RBM23	100	86.177	Sorex_araneus
ENSCHIG00000025709	RBM23	70	79.027	ENSSPUG00000000489	RBM23	96	67.872	Sphenodon_punctatus
ENSCHIG00000025709	RBM23	100	84.516	ENSSSCG00000026700	RBM23	100	88.817	Sus_scrofa
ENSCHIG00000025709	RBM23	100	81.681	ENSTBEG00000011543	RBM23	100	85.161	Tupaia_belangeri
ENSCHIG00000025709	RBM23	100	84.665	ENSTTRG00000001500	RBM23	100	86.609	Tursiops_truncatus
ENSCHIG00000025709	RBM23	100	87.257	ENSUAMG00000008524	RBM23	100	88.121	Ursus_americanus
ENSCHIG00000025709	RBM23	100	87.257	ENSUMAG00000014075	RBM23	100	88.121	Ursus_maritimus
ENSCHIG00000025709	RBM23	100	87.257	ENSVVUG00000019815	RBM23	100	88.121	Vulpes_vulpes
ENSCHIG00000025709	RBM23	66	74.516	ENSXETG00000022623	rbm23	100	61.392	Xenopus_tropicalis